Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2436:A2488
Extra
PDB:
ATOM 1 O3' A A2435 -40.928 119.561 163.383 1.00 42.83 O
ATOM 2 P C A2436 -41.542 118.544 164.456 1.00 34.96 P
ATOM 3 OP1 C A2436 -42.078 117.379 163.690 1.00 25.19 O
ATOM 4 OP2 C A2436 -42.392 119.335 165.395 1.00 32.81 O
ATOM 5 O5' C A2436 -40.231 118.121 165.289 1.00 41.37 O
ATOM 6 C5' C A2436 -39.163 117.377 164.723 1.00 51.27 C
ATOM 7 C4' C A2436 -38.231 116.911 165.823 1.00 37.19 C
ATOM 8 O4' C A2436 -37.540 118.048 166.373 1.00 31.67 O
ATOM 9 C3' C A2436 -38.921 116.320 167.035 1.00 34.37 C
ATOM 10 O3' C A2436 -39.203 114.944 166.802 1.00 37.07 O
ATOM 11 C2' C A2436 -37.858 116.497 168.114 1.00 40.66 C
ATOM 12 O2' C A2436 -36.904 115.451 168.092 1.00 59.09 O
ATOM 13 C1' C A2436 -37.157 117.782 167.705 1.00 32.21 C
ATOM 14 N1 C A2436 -37.498 118.983 168.493 1.00 27.27 N
ATOM 15 C2 C A2436 -36.924 119.242 169.744 1.00 34.24 C
ATOM 16 O2 C A2436 -36.109 118.447 170.230 1.00 36.72 O
ATOM 17 N3 C A2436 -37.283 120.381 170.398 1.00 42.39 N
ATOM 18 C4 C A2436 -38.155 121.244 169.845 1.00 42.42 C
ATOM 19 N4 C A2436 -38.482 122.366 170.509 1.00 44.63 N
ATOM 20 C5 C A2436 -38.739 120.993 168.569 1.00 36.02 C
ATOM 21 C6 C A2436 -38.376 119.867 167.943 1.00 34.04 C
ATOM 22 P A A2437 -40.568 114.278 167.317 1.00 35.89 P
ATOM 23 OP1 A A2437 -40.650 112.928 166.715 1.00 50.03 O
ATOM 24 OP2 A A2437 -41.648 115.261 167.046 1.00 52.24 O
ATOM 25 O5' A A2437 -40.354 114.116 168.900 1.00 27.70 O
TER
ATOM 1 O3' A B2487 -30.043 124.098 175.713 1.00 35.31 O
ATOM 2 P U B2488 -31.166 124.160 176.861 1.00 36.31 P
ATOM 3 OP1 U B2488 -32.195 125.145 176.441 1.00 50.26 O
ATOM 4 OP2 U B2488 -30.523 124.288 178.199 1.00 24.32 O
ATOM 5 O5' U B2488 -31.751 122.663 176.698 1.00 34.27 O
ATOM 6 C5' U B2488 -31.101 121.576 177.384 1.00 38.89 C
ATOM 7 C4' U B2488 -31.334 120.228 176.730 1.00 40.78 C
ATOM 8 O4' U B2488 -32.738 119.859 176.753 1.00 47.75 O
ATOM 9 C3' U B2488 -30.976 120.166 175.259 1.00 39.35 C
ATOM 10 O3' U B2488 -29.577 120.019 175.138 1.00 38.51 O
ATOM 11 C2' U B2488 -31.778 118.944 174.800 1.00 43.41 C
ATOM 12 O2' U B2488 -31.242 117.702 175.223 1.00 52.55 O
ATOM 13 C1' U B2488 -33.084 119.219 175.534 1.00 42.48 C
ATOM 14 N1 U B2488 -33.951 120.157 174.807 1.00 37.01 N
ATOM 15 C2 U B2488 -34.606 119.744 173.668 1.00 41.79 C
ATOM 16 O2 U B2488 -34.512 118.615 173.200 1.00 39.91 O
ATOM 17 N3 U B2488 -35.386 120.722 173.084 1.00 43.96 N
ATOM 18 C4 U B2488 -35.568 122.030 173.508 1.00 46.70 C
ATOM 19 O4 U B2488 -36.297 122.792 172.875 1.00 62.76 O
ATOM 20 C5 U B2488 -34.846 122.371 174.703 1.00 41.49 C
ATOM 21 C6 U B2488 -34.085 121.442 175.286 1.00 39.99 C
ATOM 22 P G B2489 -28.985 120.292 173.679 1.00 26.18 P
ATOM 23 OP1 G B2489 -27.514 120.574 173.751 1.00 25.08 O
ATOM 24 OP2 G B2489 -29.910 121.313 173.103 1.00 20.86 O
ATOM 25 O5' G B2489 -29.265 118.848 172.963 1.00 32.96 O
TER
ATOM 2 P C A2436 -41.542 118.544 164.456 1.00 34.96 P
ATOM 3 OP1 C A2436 -42.078 117.379 163.690 1.00 25.19 O
ATOM 4 OP2 C A2436 -42.392 119.335 165.395 1.00 32.81 O
ATOM 5 O5' C A2436 -40.231 118.121 165.289 1.00 41.37 O
ATOM 6 C5' C A2436 -39.163 117.377 164.723 1.00 51.27 C
ATOM 7 C4' C A2436 -38.231 116.911 165.823 1.00 37.19 C
ATOM 8 O4' C A2436 -37.540 118.048 166.373 1.00 31.67 O
ATOM 9 C3' C A2436 -38.921 116.320 167.035 1.00 34.37 C
ATOM 10 O3' C A2436 -39.203 114.944 166.802 1.00 37.07 O
ATOM 11 C2' C A2436 -37.858 116.497 168.114 1.00 40.66 C
ATOM 12 O2' C A2436 -36.904 115.451 168.092 1.00 59.09 O
ATOM 13 C1' C A2436 -37.157 117.782 167.705 1.00 32.21 C
ATOM 14 N1 C A2436 -37.498 118.983 168.493 1.00 27.27 N
ATOM 15 C2 C A2436 -36.924 119.242 169.744 1.00 34.24 C
ATOM 16 O2 C A2436 -36.109 118.447 170.230 1.00 36.72 O
ATOM 17 N3 C A2436 -37.283 120.381 170.398 1.00 42.39 N
ATOM 18 C4 C A2436 -38.155 121.244 169.845 1.00 42.42 C
ATOM 19 N4 C A2436 -38.482 122.366 170.509 1.00 44.63 N
ATOM 20 C5 C A2436 -38.739 120.993 168.569 1.00 36.02 C
ATOM 21 C6 C A2436 -38.376 119.867 167.943 1.00 34.04 C
ATOM 22 P A A2437 -40.568 114.278 167.317 1.00 35.89 P
ATOM 23 OP1 A A2437 -40.650 112.928 166.715 1.00 50.03 O
ATOM 24 OP2 A A2437 -41.648 115.261 167.046 1.00 52.24 O
ATOM 25 O5' A A2437 -40.354 114.116 168.900 1.00 27.70 O
TER
ATOM 1 O3' A B2487 -30.043 124.098 175.713 1.00 35.31 O
ATOM 2 P U B2488 -31.166 124.160 176.861 1.00 36.31 P
ATOM 3 OP1 U B2488 -32.195 125.145 176.441 1.00 50.26 O
ATOM 4 OP2 U B2488 -30.523 124.288 178.199 1.00 24.32 O
ATOM 5 O5' U B2488 -31.751 122.663 176.698 1.00 34.27 O
ATOM 6 C5' U B2488 -31.101 121.576 177.384 1.00 38.89 C
ATOM 7 C4' U B2488 -31.334 120.228 176.730 1.00 40.78 C
ATOM 8 O4' U B2488 -32.738 119.859 176.753 1.00 47.75 O
ATOM 9 C3' U B2488 -30.976 120.166 175.259 1.00 39.35 C
ATOM 10 O3' U B2488 -29.577 120.019 175.138 1.00 38.51 O
ATOM 11 C2' U B2488 -31.778 118.944 174.800 1.00 43.41 C
ATOM 12 O2' U B2488 -31.242 117.702 175.223 1.00 52.55 O
ATOM 13 C1' U B2488 -33.084 119.219 175.534 1.00 42.48 C
ATOM 14 N1 U B2488 -33.951 120.157 174.807 1.00 37.01 N
ATOM 15 C2 U B2488 -34.606 119.744 173.668 1.00 41.79 C
ATOM 16 O2 U B2488 -34.512 118.615 173.200 1.00 39.91 O
ATOM 17 N3 U B2488 -35.386 120.722 173.084 1.00 43.96 N
ATOM 18 C4 U B2488 -35.568 122.030 173.508 1.00 46.70 C
ATOM 19 O4 U B2488 -36.297 122.792 172.875 1.00 62.76 O
ATOM 20 C5 U B2488 -34.846 122.371 174.703 1.00 41.49 C
ATOM 21 C6 U B2488 -34.085 121.442 175.286 1.00 39.99 C
ATOM 22 P G B2489 -28.985 120.292 173.679 1.00 26.18 P
ATOM 23 OP1 G B2489 -27.514 120.574 173.751 1.00 25.08 O
ATOM 24 OP2 G B2489 -29.910 121.313 173.103 1.00 20.86 O
ATOM 25 O5' G B2489 -29.265 118.848 172.963 1.00 32.96 O
TER
Atoms:
C2: (-36.924,119.242,169.744)
OP1: (-42.078,117.379,163.690)
OP2: (-42.392,119.335,165.395)
C4: (-38.155,121.244,169.845)
O5': (-40.231,118.121,165.289)
C3': (-38.921,116.320,167.035)
C1': (-37.157,117.782,167.705)
O4': (-37.540,118.048,166.373)
C5': (-39.163,117.377,164.723)
P: (-41.542,118.544,164.456)
O2: (-36.109,118.447,170.230)
C4': (-38.231,116.911,165.823)
C2': (-37.858,116.497,168.114)
O2': (-36.904,115.451,168.092)
N1: (-37.498,118.983,168.493)
N3: (-37.283,120.381,170.398)
N4: (-38.482,122.366,170.509)
C6: (-38.376,119.867,167.943)
C5: (-38.739,120.993,168.569)
O3': (-39.203,114.944,166.802)
OP1: (-42.078,117.379,163.690)
OP2: (-42.392,119.335,165.395)
C4: (-38.155,121.244,169.845)
O5': (-40.231,118.121,165.289)
C3': (-38.921,116.320,167.035)
C1': (-37.157,117.782,167.705)
O4': (-37.540,118.048,166.373)
C5': (-39.163,117.377,164.723)
P: (-41.542,118.544,164.456)
O2: (-36.109,118.447,170.230)
C4': (-38.231,116.911,165.823)
C2': (-37.858,116.497,168.114)
O2': (-36.904,115.451,168.092)
N1: (-37.498,118.983,168.493)
N3: (-37.283,120.381,170.398)
N4: (-38.482,122.366,170.509)
C6: (-38.376,119.867,167.943)
C5: (-38.739,120.993,168.569)
O3': (-39.203,114.944,166.802)
C4: (-35.568,122.030,173.508)
N3: (-35.386,120.722,173.084)
OP1: (-32.195,125.145,176.441)
OP2: (-30.523,124.288,178.199)
C2: (-34.606,119.744,173.668)
C1': (-33.084,119.219,175.534)
C3': (-30.976,120.166,175.259)
O5': (-31.751,122.663,176.698)
O4': (-32.738,119.859,176.753)
C5': (-31.101,121.576,177.384)
P: (-31.166,124.160,176.861)
C4': (-31.334,120.228,176.730)
C2': (-31.778,118.944,174.800)
O2': (-31.242,117.702,175.223)
N1: (-33.951,120.157,174.807)
O4: (-36.297,122.792,172.875)
O2: (-34.512,118.615,173.200)
C6: (-34.085,121.442,175.286)
C5: (-34.846,122.371,174.703)
O3': (-29.577,120.019,175.138)
N3: (-35.386,120.722,173.084)
OP1: (-32.195,125.145,176.441)
OP2: (-30.523,124.288,178.199)
C2: (-34.606,119.744,173.668)
C1': (-33.084,119.219,175.534)
C3': (-30.976,120.166,175.259)
O5': (-31.751,122.663,176.698)
O4': (-32.738,119.859,176.753)
C5': (-31.101,121.576,177.384)
P: (-31.166,124.160,176.861)
C4': (-31.334,120.228,176.730)
C2': (-31.778,118.944,174.800)
O2': (-31.242,117.702,175.223)
N1: (-33.951,120.157,174.807)
O4: (-36.297,122.792,172.875)
O2: (-34.512,118.615,173.200)
C6: (-34.085,121.442,175.286)
C5: (-34.846,122.371,174.703)
O3': (-29.577,120.019,175.138)
Image (generated by PyMOL):