Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2357:A2409
Extra
PDB:
ATOM 1 O3' A A2356 92.257 -51.966 -4.444 1.00 50.29 O
ATOM 2 P C A2357 92.733 -53.067 -3.345 1.00 58.37 P
ATOM 3 OP1 C A2357 93.192 -52.375 -2.105 1.00 58.98 O
ATOM 4 OP2 C A2357 93.649 -54.022 -4.029 1.00 45.19 O
ATOM 5 O5' C A2357 91.407 -53.887 -2.999 1.00 55.07 O
ATOM 6 C5' C A2357 90.266 -53.253 -2.416 1.00 55.74 C
ATOM 7 C4' C A2357 89.297 -54.286 -1.876 1.00 49.70 C
ATOM 8 O4' C A2357 88.508 -54.873 -2.930 1.00 47.63 O
ATOM 9 C3' C A2357 89.937 -55.464 -1.181 1.00 43.10 C
ATOM 10 O3' C A2357 90.189 -55.112 0.153 1.00 42.33 O
ATOM 11 C2' C A2357 88.894 -56.564 -1.287 1.00 43.30 C
ATOM 12 O2' C A2357 87.944 -56.542 -0.243 1.00 43.59 O
ATOM 13 C1' C A2357 88.217 -56.219 -2.610 1.00 44.67 C
ATOM 14 N1 C A2357 88.669 -57.038 -3.732 1.00 44.22 N
ATOM 15 C2 C A2357 88.239 -58.357 -3.826 1.00 51.28 C
ATOM 16 O2 C A2357 87.568 -58.844 -2.893 1.00 51.69 O
ATOM 17 N3 C A2357 88.575 -59.083 -4.926 1.00 48.33 N
ATOM 18 C4 C A2357 89.319 -58.528 -5.884 1.00 48.56 C
ATOM 19 N4 C A2357 89.570 -59.246 -6.988 1.00 48.89 N
ATOM 20 C5 C A2357 89.824 -57.208 -5.771 1.00 48.08 C
ATOM 21 C6 C A2357 89.476 -56.505 -4.691 1.00 40.65 C
ATOM 22 P A A2358 91.577 -55.527 0.808 1.00 41.01 P
ATOM 23 OP1 A A2358 91.643 -54.837 2.141 1.00 37.12 O
ATOM 24 OP2 A A2358 92.607 -55.235 -0.227 1.00 47.35 O
ATOM 25 O5' A A2358 91.425 -57.107 0.978 1.00 37.80 O
TER
ATOM 1 O3' A B2408 81.212 -64.937 -9.191 1.00 39.63 O
ATOM 2 P U B2409 82.775 -65.382 -9.223 1.00 37.96 P
ATOM 3 OP1 U B2409 83.580 -64.363 -9.942 1.00 36.47 O
ATOM 4 OP2 U B2409 82.865 -66.809 -9.638 1.00 33.12 O
ATOM 5 O5' U B2409 83.225 -65.307 -7.683 1.00 33.25 O
ATOM 6 C5' U B2409 82.485 -65.963 -6.652 1.00 33.02 C
ATOM 7 C4' U B2409 82.896 -65.457 -5.290 1.00 33.98 C
ATOM 8 O4' U B2409 84.342 -65.538 -5.185 1.00 35.48 O
ATOM 9 C3' U B2409 82.591 -64.004 -4.963 1.00 33.95 C
ATOM 10 O3' U B2409 81.242 -63.785 -4.537 1.00 35.47 O
ATOM 11 C2' U B2409 83.613 -63.699 -3.881 1.00 38.83 C
ATOM 12 O2' U B2409 83.228 -64.249 -2.640 1.00 41.81 O
ATOM 13 C1' U B2409 84.833 -64.456 -4.410 1.00 37.86 C
ATOM 14 N1 U B2409 85.643 -63.580 -5.281 1.00 38.58 N
ATOM 15 C2 U B2409 86.272 -62.472 -4.712 1.00 42.00 C
ATOM 16 O2 U B2409 86.270 -62.235 -3.506 1.00 44.36 O
ATOM 17 N3 U B2409 86.907 -61.649 -5.610 1.00 44.75 N
ATOM 18 C4 U B2409 86.973 -61.804 -6.979 1.00 44.59 C
ATOM 19 O4 U B2409 87.301 -60.832 -7.671 1.00 46.77 O
ATOM 20 C5 U B2409 86.359 -63.003 -7.468 1.00 39.72 C
ATOM 21 C6 U B2409 85.731 -63.823 -6.626 1.00 38.94 C
ATOM 22 P G B2410 80.345 -62.696 -5.325 1.00 41.43 P
ATOM 23 OP1 G B2410 79.076 -63.362 -5.794 1.00 36.51 O
ATOM 24 OP2 G B2410 81.229 -62.007 -6.313 1.00 29.78 O
ATOM 25 O5' G B2410 79.996 -61.571 -4.241 1.00 43.04 O
TER
ATOM 2 P C A2357 92.733 -53.067 -3.345 1.00 58.37 P
ATOM 3 OP1 C A2357 93.192 -52.375 -2.105 1.00 58.98 O
ATOM 4 OP2 C A2357 93.649 -54.022 -4.029 1.00 45.19 O
ATOM 5 O5' C A2357 91.407 -53.887 -2.999 1.00 55.07 O
ATOM 6 C5' C A2357 90.266 -53.253 -2.416 1.00 55.74 C
ATOM 7 C4' C A2357 89.297 -54.286 -1.876 1.00 49.70 C
ATOM 8 O4' C A2357 88.508 -54.873 -2.930 1.00 47.63 O
ATOM 9 C3' C A2357 89.937 -55.464 -1.181 1.00 43.10 C
ATOM 10 O3' C A2357 90.189 -55.112 0.153 1.00 42.33 O
ATOM 11 C2' C A2357 88.894 -56.564 -1.287 1.00 43.30 C
ATOM 12 O2' C A2357 87.944 -56.542 -0.243 1.00 43.59 O
ATOM 13 C1' C A2357 88.217 -56.219 -2.610 1.00 44.67 C
ATOM 14 N1 C A2357 88.669 -57.038 -3.732 1.00 44.22 N
ATOM 15 C2 C A2357 88.239 -58.357 -3.826 1.00 51.28 C
ATOM 16 O2 C A2357 87.568 -58.844 -2.893 1.00 51.69 O
ATOM 17 N3 C A2357 88.575 -59.083 -4.926 1.00 48.33 N
ATOM 18 C4 C A2357 89.319 -58.528 -5.884 1.00 48.56 C
ATOM 19 N4 C A2357 89.570 -59.246 -6.988 1.00 48.89 N
ATOM 20 C5 C A2357 89.824 -57.208 -5.771 1.00 48.08 C
ATOM 21 C6 C A2357 89.476 -56.505 -4.691 1.00 40.65 C
ATOM 22 P A A2358 91.577 -55.527 0.808 1.00 41.01 P
ATOM 23 OP1 A A2358 91.643 -54.837 2.141 1.00 37.12 O
ATOM 24 OP2 A A2358 92.607 -55.235 -0.227 1.00 47.35 O
ATOM 25 O5' A A2358 91.425 -57.107 0.978 1.00 37.80 O
TER
ATOM 1 O3' A B2408 81.212 -64.937 -9.191 1.00 39.63 O
ATOM 2 P U B2409 82.775 -65.382 -9.223 1.00 37.96 P
ATOM 3 OP1 U B2409 83.580 -64.363 -9.942 1.00 36.47 O
ATOM 4 OP2 U B2409 82.865 -66.809 -9.638 1.00 33.12 O
ATOM 5 O5' U B2409 83.225 -65.307 -7.683 1.00 33.25 O
ATOM 6 C5' U B2409 82.485 -65.963 -6.652 1.00 33.02 C
ATOM 7 C4' U B2409 82.896 -65.457 -5.290 1.00 33.98 C
ATOM 8 O4' U B2409 84.342 -65.538 -5.185 1.00 35.48 O
ATOM 9 C3' U B2409 82.591 -64.004 -4.963 1.00 33.95 C
ATOM 10 O3' U B2409 81.242 -63.785 -4.537 1.00 35.47 O
ATOM 11 C2' U B2409 83.613 -63.699 -3.881 1.00 38.83 C
ATOM 12 O2' U B2409 83.228 -64.249 -2.640 1.00 41.81 O
ATOM 13 C1' U B2409 84.833 -64.456 -4.410 1.00 37.86 C
ATOM 14 N1 U B2409 85.643 -63.580 -5.281 1.00 38.58 N
ATOM 15 C2 U B2409 86.272 -62.472 -4.712 1.00 42.00 C
ATOM 16 O2 U B2409 86.270 -62.235 -3.506 1.00 44.36 O
ATOM 17 N3 U B2409 86.907 -61.649 -5.610 1.00 44.75 N
ATOM 18 C4 U B2409 86.973 -61.804 -6.979 1.00 44.59 C
ATOM 19 O4 U B2409 87.301 -60.832 -7.671 1.00 46.77 O
ATOM 20 C5 U B2409 86.359 -63.003 -7.468 1.00 39.72 C
ATOM 21 C6 U B2409 85.731 -63.823 -6.626 1.00 38.94 C
ATOM 22 P G B2410 80.345 -62.696 -5.325 1.00 41.43 P
ATOM 23 OP1 G B2410 79.076 -63.362 -5.794 1.00 36.51 O
ATOM 24 OP2 G B2410 81.229 -62.007 -6.313 1.00 29.78 O
ATOM 25 O5' G B2410 79.996 -61.571 -4.241 1.00 43.04 O
TER
Atoms:
C2: (88.239,-58.357,-3.826)
OP1: (93.192,-52.375,-2.105)
OP2: (93.649,-54.022,-4.029)
C4: (89.319,-58.528,-5.884)
O5': (91.407,-53.887,-2.999)
C3': (89.937,-55.464,-1.181)
C1': (88.217,-56.219,-2.610)
O4': (88.508,-54.873,-2.930)
C5': (90.266,-53.253,-2.416)
P: (92.733,-53.067,-3.345)
O2: (87.568,-58.844,-2.893)
C4': (89.297,-54.286,-1.876)
C2': (88.894,-56.564,-1.287)
O2': (87.944,-56.542,-0.243)
N1: (88.669,-57.038,-3.732)
N3: (88.575,-59.083,-4.926)
N4: (89.570,-59.246,-6.988)
C6: (89.476,-56.505,-4.691)
C5: (89.824,-57.208,-5.771)
O3': (90.189,-55.112,0.153)
OP1: (93.192,-52.375,-2.105)
OP2: (93.649,-54.022,-4.029)
C4: (89.319,-58.528,-5.884)
O5': (91.407,-53.887,-2.999)
C3': (89.937,-55.464,-1.181)
C1': (88.217,-56.219,-2.610)
O4': (88.508,-54.873,-2.930)
C5': (90.266,-53.253,-2.416)
P: (92.733,-53.067,-3.345)
O2: (87.568,-58.844,-2.893)
C4': (89.297,-54.286,-1.876)
C2': (88.894,-56.564,-1.287)
O2': (87.944,-56.542,-0.243)
N1: (88.669,-57.038,-3.732)
N3: (88.575,-59.083,-4.926)
N4: (89.570,-59.246,-6.988)
C6: (89.476,-56.505,-4.691)
C5: (89.824,-57.208,-5.771)
O3': (90.189,-55.112,0.153)
C4: (86.973,-61.804,-6.979)
N3: (86.907,-61.649,-5.610)
OP1: (83.580,-64.363,-9.942)
OP2: (82.865,-66.809,-9.638)
C2: (86.272,-62.472,-4.712)
C1': (84.833,-64.456,-4.410)
C3': (82.591,-64.004,-4.963)
O5': (83.225,-65.307,-7.683)
O4': (84.342,-65.538,-5.185)
C5': (82.485,-65.963,-6.652)
P: (82.775,-65.382,-9.223)
C4': (82.896,-65.457,-5.290)
C2': (83.613,-63.699,-3.881)
O2': (83.228,-64.249,-2.640)
N1: (85.643,-63.580,-5.281)
O4: (87.301,-60.832,-7.671)
O2: (86.270,-62.235,-3.506)
C6: (85.731,-63.823,-6.626)
C5: (86.359,-63.003,-7.468)
O3': (81.242,-63.785,-4.537)
N3: (86.907,-61.649,-5.610)
OP1: (83.580,-64.363,-9.942)
OP2: (82.865,-66.809,-9.638)
C2: (86.272,-62.472,-4.712)
C1': (84.833,-64.456,-4.410)
C3': (82.591,-64.004,-4.963)
O5': (83.225,-65.307,-7.683)
O4': (84.342,-65.538,-5.185)
C5': (82.485,-65.963,-6.652)
P: (82.775,-65.382,-9.223)
C4': (82.896,-65.457,-5.290)
C2': (83.613,-63.699,-3.881)
O2': (83.228,-64.249,-2.640)
N1: (85.643,-63.580,-5.281)
O4: (87.301,-60.832,-7.671)
O2: (86.270,-62.235,-3.506)
C6: (85.731,-63.823,-6.626)
C5: (86.359,-63.003,-7.468)
O3': (81.242,-63.785,-4.537)
Image (generated by PyMOL):