Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0355:0272
Extra
PDB:
ATOM 1 O3' U A 354 73.653 112.735 -9.577 1.00105.15 O
ATOM 2 P G A 355 73.773 111.586 -10.697 1.00105.94 P
ATOM 3 OP1 G A 355 75.187 111.589 -11.153 1.00105.77 O
ATOM 4 OP2 G A 355 72.678 111.768 -11.689 1.00105.52 O
ATOM 5 O5' G A 355 73.499 110.231 -9.907 1.00105.51 O
ATOM 6 C5' G A 355 74.031 110.024 -8.587 1.00106.49 C
ATOM 7 C4' G A 355 73.156 109.063 -7.817 1.00107.52 C
ATOM 8 O4' G A 355 71.804 109.602 -7.765 1.00107.61 O
ATOM 9 C3' G A 355 73.029 107.660 -8.403 1.00108.49 C
ATOM 10 O3' G A 355 72.872 106.723 -7.345 1.00109.16 O
ATOM 11 C2' G A 355 71.742 107.751 -9.218 1.00108.56 C
ATOM 12 O2' G A 355 71.096 106.502 -9.397 1.00108.56 O
ATOM 13 C1' G A 355 70.899 108.686 -8.353 1.00107.92 C
ATOM 14 N9 G A 355 69.913 109.446 -9.117 1.00107.63 N
ATOM 15 C8 G A 355 70.144 110.223 -10.230 1.00108.20 C
ATOM 16 N7 G A 355 69.060 110.776 -10.705 1.00108.41 N
ATOM 17 C5 G A 355 68.051 110.340 -9.855 1.00108.11 C
ATOM 18 C6 G A 355 66.653 110.609 -9.870 1.00108.42 C
ATOM 19 O6 G A 355 66.006 111.304 -10.668 1.00108.58 O
ATOM 20 N1 G A 355 66.000 109.971 -8.818 1.00107.81 N
ATOM 21 C2 G A 355 66.608 109.175 -7.877 1.00107.04 C
ATOM 22 N2 G A 355 65.806 108.654 -6.938 1.00107.19 N
ATOM 23 N3 G A 355 67.905 108.910 -7.857 1.00106.65 N
ATOM 24 C4 G A 355 68.562 109.522 -8.867 1.00107.44 C
ATOM 25 P C A 356 73.680 105.332 -7.374 1.00109.54 P
ATOM 26 OP1 C A 356 75.025 105.567 -6.778 1.00108.84 O
ATOM 27 OP2 C A 356 73.571 104.751 -8.737 1.00109.01 O
ATOM 28 O5' C A 356 72.848 104.414 -6.375 1.00109.54 O
TER
ATOM 1 O3' U B 271 65.253 104.158 -8.095 1.00143.16 O
ATOM 2 P C B 272 63.886 103.340 -7.859 1.00143.29 P
ATOM 3 OP1 C B 272 64.248 101.897 -7.855 1.00143.60 O
ATOM 4 OP2 C B 272 62.844 103.833 -8.795 1.00142.96 O
ATOM 5 O5' C B 272 63.451 103.740 -6.381 1.00141.90 O
ATOM 6 C5' C B 272 64.173 104.744 -5.649 1.00139.86 C
ATOM 7 C4' C B 272 63.403 106.043 -5.648 1.00138.21 C
ATOM 8 O4' C B 272 63.408 106.639 -6.977 1.00138.37 O
ATOM 9 C3' C B 272 61.936 105.933 -5.234 1.00136.72 C
ATOM 10 O3' C B 272 61.556 107.116 -4.535 1.00133.51 O
ATOM 11 C2' C B 272 61.227 105.911 -6.586 1.00137.16 C
ATOM 12 O2' C B 272 59.876 106.326 -6.527 1.00137.17 O
ATOM 13 C1' C B 272 62.078 106.915 -7.365 1.00137.82 C
ATOM 14 N1 C B 272 61.994 106.913 -8.843 1.00137.97 N
ATOM 15 C2 C B 272 62.770 107.842 -9.566 1.00137.86 C
ATOM 16 O2 C B 272 63.517 108.621 -8.952 1.00137.74 O
ATOM 17 N3 C B 272 62.684 107.865 -10.914 1.00137.82 N
ATOM 18 C4 C B 272 61.872 107.015 -11.546 1.00138.06 C
ATOM 19 N4 C B 272 61.812 107.084 -12.877 1.00137.92 N
ATOM 20 C5 C B 272 61.083 106.058 -10.843 1.00137.88 C
ATOM 21 C6 C B 272 61.173 106.041 -9.507 1.00137.91 C
ATOM 22 P A B 273 62.324 107.541 -3.185 1.00131.34 P
ATOM 23 OP1 A B 273 61.329 107.546 -2.077 1.00131.46 O
ATOM 24 OP2 A B 273 63.083 108.781 -3.501 1.00130.90 O
ATOM 25 O5' A B 273 63.387 106.378 -2.929 1.00127.56 O
TER
ATOM 2 P G A 355 73.773 111.586 -10.697 1.00105.94 P
ATOM 3 OP1 G A 355 75.187 111.589 -11.153 1.00105.77 O
ATOM 4 OP2 G A 355 72.678 111.768 -11.689 1.00105.52 O
ATOM 5 O5' G A 355 73.499 110.231 -9.907 1.00105.51 O
ATOM 6 C5' G A 355 74.031 110.024 -8.587 1.00106.49 C
ATOM 7 C4' G A 355 73.156 109.063 -7.817 1.00107.52 C
ATOM 8 O4' G A 355 71.804 109.602 -7.765 1.00107.61 O
ATOM 9 C3' G A 355 73.029 107.660 -8.403 1.00108.49 C
ATOM 10 O3' G A 355 72.872 106.723 -7.345 1.00109.16 O
ATOM 11 C2' G A 355 71.742 107.751 -9.218 1.00108.56 C
ATOM 12 O2' G A 355 71.096 106.502 -9.397 1.00108.56 O
ATOM 13 C1' G A 355 70.899 108.686 -8.353 1.00107.92 C
ATOM 14 N9 G A 355 69.913 109.446 -9.117 1.00107.63 N
ATOM 15 C8 G A 355 70.144 110.223 -10.230 1.00108.20 C
ATOM 16 N7 G A 355 69.060 110.776 -10.705 1.00108.41 N
ATOM 17 C5 G A 355 68.051 110.340 -9.855 1.00108.11 C
ATOM 18 C6 G A 355 66.653 110.609 -9.870 1.00108.42 C
ATOM 19 O6 G A 355 66.006 111.304 -10.668 1.00108.58 O
ATOM 20 N1 G A 355 66.000 109.971 -8.818 1.00107.81 N
ATOM 21 C2 G A 355 66.608 109.175 -7.877 1.00107.04 C
ATOM 22 N2 G A 355 65.806 108.654 -6.938 1.00107.19 N
ATOM 23 N3 G A 355 67.905 108.910 -7.857 1.00106.65 N
ATOM 24 C4 G A 355 68.562 109.522 -8.867 1.00107.44 C
ATOM 25 P C A 356 73.680 105.332 -7.374 1.00109.54 P
ATOM 26 OP1 C A 356 75.025 105.567 -6.778 1.00108.84 O
ATOM 27 OP2 C A 356 73.571 104.751 -8.737 1.00109.01 O
ATOM 28 O5' C A 356 72.848 104.414 -6.375 1.00109.54 O
TER
ATOM 1 O3' U B 271 65.253 104.158 -8.095 1.00143.16 O
ATOM 2 P C B 272 63.886 103.340 -7.859 1.00143.29 P
ATOM 3 OP1 C B 272 64.248 101.897 -7.855 1.00143.60 O
ATOM 4 OP2 C B 272 62.844 103.833 -8.795 1.00142.96 O
ATOM 5 O5' C B 272 63.451 103.740 -6.381 1.00141.90 O
ATOM 6 C5' C B 272 64.173 104.744 -5.649 1.00139.86 C
ATOM 7 C4' C B 272 63.403 106.043 -5.648 1.00138.21 C
ATOM 8 O4' C B 272 63.408 106.639 -6.977 1.00138.37 O
ATOM 9 C3' C B 272 61.936 105.933 -5.234 1.00136.72 C
ATOM 10 O3' C B 272 61.556 107.116 -4.535 1.00133.51 O
ATOM 11 C2' C B 272 61.227 105.911 -6.586 1.00137.16 C
ATOM 12 O2' C B 272 59.876 106.326 -6.527 1.00137.17 O
ATOM 13 C1' C B 272 62.078 106.915 -7.365 1.00137.82 C
ATOM 14 N1 C B 272 61.994 106.913 -8.843 1.00137.97 N
ATOM 15 C2 C B 272 62.770 107.842 -9.566 1.00137.86 C
ATOM 16 O2 C B 272 63.517 108.621 -8.952 1.00137.74 O
ATOM 17 N3 C B 272 62.684 107.865 -10.914 1.00137.82 N
ATOM 18 C4 C B 272 61.872 107.015 -11.546 1.00138.06 C
ATOM 19 N4 C B 272 61.812 107.084 -12.877 1.00137.92 N
ATOM 20 C5 C B 272 61.083 106.058 -10.843 1.00137.88 C
ATOM 21 C6 C B 272 61.173 106.041 -9.507 1.00137.91 C
ATOM 22 P A B 273 62.324 107.541 -3.185 1.00131.34 P
ATOM 23 OP1 A B 273 61.329 107.546 -2.077 1.00131.46 O
ATOM 24 OP2 A B 273 63.083 108.781 -3.501 1.00130.90 O
ATOM 25 O5' A B 273 63.387 106.378 -2.929 1.00127.56 O
TER
Atoms:
OP1: (75.187,111.589,-11.153)
OP2: (72.678,111.768,-11.689)
C3': (73.029,107.660,-8.403)
C1': (70.899,108.686,-8.353)
C5': (74.031,110.024,-8.587)
O6: (66.006,111.304,-10.668)
O4': (71.804,109.602,-7.765)
C8: (70.144,110.223,-10.230)
C2: (66.608,109.175,-7.877)
C6: (66.653,110.609,-9.870)
C5: (68.051,110.340,-9.855)
C4: (68.562,109.522,-8.867)
P: (73.773,111.586,-10.697)
C4': (73.156,109.063,-7.817)
C2': (71.742,107.751,-9.218)
O2': (71.096,106.502,-9.397)
N1: (66.000,109.971,-8.818)
N2: (65.806,108.654,-6.938)
N3: (67.905,108.910,-7.857)
N7: (69.060,110.776,-10.705)
N9: (69.913,109.446,-9.117)
O5': (73.499,110.231,-9.907)
O3': (72.872,106.723,-7.345)
OP2: (72.678,111.768,-11.689)
C3': (73.029,107.660,-8.403)
C1': (70.899,108.686,-8.353)
C5': (74.031,110.024,-8.587)
O6: (66.006,111.304,-10.668)
O4': (71.804,109.602,-7.765)
C8: (70.144,110.223,-10.230)
C2: (66.608,109.175,-7.877)
C6: (66.653,110.609,-9.870)
C5: (68.051,110.340,-9.855)
C4: (68.562,109.522,-8.867)
P: (73.773,111.586,-10.697)
C4': (73.156,109.063,-7.817)
C2': (71.742,107.751,-9.218)
O2': (71.096,106.502,-9.397)
N1: (66.000,109.971,-8.818)
N2: (65.806,108.654,-6.938)
N3: (67.905,108.910,-7.857)
N7: (69.060,110.776,-10.705)
N9: (69.913,109.446,-9.117)
O5': (73.499,110.231,-9.907)
O3': (72.872,106.723,-7.345)
C2: (62.770,107.842,-9.566)
OP1: (64.248,101.897,-7.855)
OP2: (62.844,103.833,-8.795)
C4: (61.872,107.015,-11.546)
O5': (63.451,103.740,-6.381)
C3': (61.936,105.933,-5.234)
C1': (62.078,106.915,-7.365)
O4': (63.408,106.639,-6.977)
C5': (64.173,104.744,-5.649)
P: (63.886,103.340,-7.859)
O2: (63.517,108.621,-8.952)
C4': (63.403,106.043,-5.648)
C2': (61.227,105.911,-6.586)
O2': (59.876,106.326,-6.527)
N1: (61.994,106.913,-8.843)
N3: (62.684,107.865,-10.914)
N4: (61.812,107.084,-12.877)
C6: (61.173,106.041,-9.507)
C5: (61.083,106.058,-10.843)
O3': (61.556,107.116,-4.535)
OP1: (64.248,101.897,-7.855)
OP2: (62.844,103.833,-8.795)
C4: (61.872,107.015,-11.546)
O5': (63.451,103.740,-6.381)
C3': (61.936,105.933,-5.234)
C1': (62.078,106.915,-7.365)
O4': (63.408,106.639,-6.977)
C5': (64.173,104.744,-5.649)
P: (63.886,103.340,-7.859)
O2: (63.517,108.621,-8.952)
C4': (63.403,106.043,-5.648)
C2': (61.227,105.911,-6.586)
O2': (59.876,106.326,-6.527)
N1: (61.994,106.913,-8.843)
N3: (62.684,107.865,-10.914)
N4: (61.812,107.084,-12.877)
C6: (61.173,106.041,-9.507)
C5: (61.083,106.058,-10.843)
O3': (61.556,107.116,-4.535)
Image (generated by PyMOL):