Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01261:01312
Extra
PDB:
ATOM 1 O3' C A1260 19.848 114.014 66.337 1.00 40.91 O
ATOM 2 P G A1261 20.053 114.811 64.959 1.00 41.30 P
ATOM 3 OP1 G A1261 18.920 115.750 64.839 1.00 43.00 O
ATOM 4 OP2 G A1261 20.343 113.857 63.859 1.00 41.55 O
ATOM 5 O5' G A1261 21.368 115.676 65.198 1.00 43.35 O
ATOM 6 C5' G A1261 21.340 116.839 66.049 1.00 42.83 C
ATOM 7 C4' G A1261 22.691 117.509 66.060 1.00 42.24 C
ATOM 8 O4' G A1261 23.692 116.580 66.557 1.00 41.73 O
ATOM 9 C3' G A1261 23.258 117.882 64.705 1.00 43.53 C
ATOM 10 O3' G A1261 22.689 119.055 64.161 1.00 44.31 O
ATOM 11 C2' G A1261 24.735 118.060 65.029 1.00 43.64 C
ATOM 12 O2' G A1261 25.014 119.277 65.701 1.00 45.76 O
ATOM 13 C1' G A1261 24.957 116.892 65.984 1.00 41.21 C
ATOM 14 N9 G A1261 25.483 115.723 65.283 1.00 38.67 N
ATOM 15 C8 G A1261 24.837 114.543 64.997 1.00 38.59 C
ATOM 16 N7 G A1261 25.584 113.700 64.336 1.00 38.15 N
ATOM 17 C5 G A1261 26.793 114.364 64.177 1.00 38.32 C
ATOM 18 C6 G A1261 27.991 113.961 63.526 1.00 39.95 C
ATOM 19 O6 G A1261 28.230 112.906 62.925 1.00 43.67 O
ATOM 20 N1 G A1261 28.973 114.940 63.607 1.00 39.77 N
ATOM 21 C2 G A1261 28.830 116.154 64.221 1.00 39.57 C
ATOM 22 N2 G A1261 29.895 116.961 64.173 1.00 36.35 N
ATOM 23 N3 G A1261 27.721 116.546 64.829 1.00 39.87 N
ATOM 24 C4 G A1261 26.749 115.607 64.765 1.00 38.35 C
ATOM 25 P C A1262 22.882 119.364 62.603 1.00 43.66 P
ATOM 26 OP1 C A1262 22.027 120.539 62.287 1.00 43.84 O
ATOM 27 OP2 C A1262 22.706 118.096 61.858 1.00 41.33 O
ATOM 28 O5' C A1262 24.413 119.779 62.478 1.00 43.87 O
TER
ATOM 1 O3' A B1311 37.605 118.709 58.988 1.00 57.07 O
ATOM 2 P C B1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 3 OP1 C B1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 4 OP2 C B1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 5 O5' C B1312 36.540 117.658 60.975 1.00 52.08 O
ATOM 6 C5' C B1312 35.773 118.857 61.136 1.00 47.64 C
ATOM 7 C4' C B1312 34.513 118.558 61.888 1.00 43.63 C
ATOM 8 O4' C B1312 33.590 117.856 61.034 1.00 41.37 O
ATOM 9 C3' C B1312 34.712 117.634 63.074 1.00 43.74 C
ATOM 10 O3' C B1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 11 C2' C B1312 33.321 117.050 63.258 1.00 42.78 C
ATOM 12 O2' C B1312 32.465 117.947 63.926 1.00 46.43 O
ATOM 13 C1' C B1312 32.859 116.923 61.804 1.00 41.91 C
ATOM 14 N1 C B1312 33.049 115.584 61.231 1.00 38.68 N
ATOM 15 C2 C B1312 32.213 114.556 61.656 1.00 37.71 C
ATOM 16 O2 C B1312 31.342 114.808 62.499 1.00 38.20 O
ATOM 17 N3 C B1312 32.374 113.314 61.139 1.00 36.66 N
ATOM 18 C4 C B1312 33.324 113.092 60.229 1.00 36.67 C
ATOM 19 N4 C B1312 33.453 111.859 59.742 1.00 33.66 N
ATOM 20 C5 C B1312 34.187 114.128 59.776 1.00 37.62 C
ATOM 21 C6 C B1312 34.017 115.346 60.300 1.00 37.41 C
ATOM 22 P G B1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 23 OP1 G B1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 24 OP2 G B1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 25 O5' G B1313 34.748 118.104 66.615 1.00 35.66 O
TER
ATOM 2 P G A1261 20.053 114.811 64.959 1.00 41.30 P
ATOM 3 OP1 G A1261 18.920 115.750 64.839 1.00 43.00 O
ATOM 4 OP2 G A1261 20.343 113.857 63.859 1.00 41.55 O
ATOM 5 O5' G A1261 21.368 115.676 65.198 1.00 43.35 O
ATOM 6 C5' G A1261 21.340 116.839 66.049 1.00 42.83 C
ATOM 7 C4' G A1261 22.691 117.509 66.060 1.00 42.24 C
ATOM 8 O4' G A1261 23.692 116.580 66.557 1.00 41.73 O
ATOM 9 C3' G A1261 23.258 117.882 64.705 1.00 43.53 C
ATOM 10 O3' G A1261 22.689 119.055 64.161 1.00 44.31 O
ATOM 11 C2' G A1261 24.735 118.060 65.029 1.00 43.64 C
ATOM 12 O2' G A1261 25.014 119.277 65.701 1.00 45.76 O
ATOM 13 C1' G A1261 24.957 116.892 65.984 1.00 41.21 C
ATOM 14 N9 G A1261 25.483 115.723 65.283 1.00 38.67 N
ATOM 15 C8 G A1261 24.837 114.543 64.997 1.00 38.59 C
ATOM 16 N7 G A1261 25.584 113.700 64.336 1.00 38.15 N
ATOM 17 C5 G A1261 26.793 114.364 64.177 1.00 38.32 C
ATOM 18 C6 G A1261 27.991 113.961 63.526 1.00 39.95 C
ATOM 19 O6 G A1261 28.230 112.906 62.925 1.00 43.67 O
ATOM 20 N1 G A1261 28.973 114.940 63.607 1.00 39.77 N
ATOM 21 C2 G A1261 28.830 116.154 64.221 1.00 39.57 C
ATOM 22 N2 G A1261 29.895 116.961 64.173 1.00 36.35 N
ATOM 23 N3 G A1261 27.721 116.546 64.829 1.00 39.87 N
ATOM 24 C4 G A1261 26.749 115.607 64.765 1.00 38.35 C
ATOM 25 P C A1262 22.882 119.364 62.603 1.00 43.66 P
ATOM 26 OP1 C A1262 22.027 120.539 62.287 1.00 43.84 O
ATOM 27 OP2 C A1262 22.706 118.096 61.858 1.00 41.33 O
ATOM 28 O5' C A1262 24.413 119.779 62.478 1.00 43.87 O
TER
ATOM 1 O3' A B1311 37.605 118.709 58.988 1.00 57.07 O
ATOM 2 P C B1312 37.931 117.702 60.214 1.00 57.35 P
ATOM 3 OP1 C B1312 38.891 118.358 61.149 1.00 54.81 O
ATOM 4 OP2 C B1312 38.217 116.325 59.695 1.00 56.13 O
ATOM 5 O5' C B1312 36.540 117.658 60.975 1.00 52.08 O
ATOM 6 C5' C B1312 35.773 118.857 61.136 1.00 47.64 C
ATOM 7 C4' C B1312 34.513 118.558 61.888 1.00 43.63 C
ATOM 8 O4' C B1312 33.590 117.856 61.034 1.00 41.37 O
ATOM 9 C3' C B1312 34.712 117.634 63.074 1.00 43.74 C
ATOM 10 O3' C B1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 11 C2' C B1312 33.321 117.050 63.258 1.00 42.78 C
ATOM 12 O2' C B1312 32.465 117.947 63.926 1.00 46.43 O
ATOM 13 C1' C B1312 32.859 116.923 61.804 1.00 41.91 C
ATOM 14 N1 C B1312 33.049 115.584 61.231 1.00 38.68 N
ATOM 15 C2 C B1312 32.213 114.556 61.656 1.00 37.71 C
ATOM 16 O2 C B1312 31.342 114.808 62.499 1.00 38.20 O
ATOM 17 N3 C B1312 32.374 113.314 61.139 1.00 36.66 N
ATOM 18 C4 C B1312 33.324 113.092 60.229 1.00 36.67 C
ATOM 19 N4 C B1312 33.453 111.859 59.742 1.00 33.66 N
ATOM 20 C5 C B1312 34.187 114.128 59.776 1.00 37.62 C
ATOM 21 C6 C B1312 34.017 115.346 60.300 1.00 37.41 C
ATOM 22 P G B1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 23 OP1 G B1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 24 OP2 G B1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 25 O5' G B1313 34.748 118.104 66.615 1.00 35.66 O
TER
Atoms:
OP1: (18.920,115.750,64.839)
OP2: (20.343,113.857,63.859)
C3': (23.258,117.882,64.705)
C1': (24.957,116.892,65.984)
C5': (21.340,116.839,66.049)
O6: (28.230,112.906,62.925)
O4': (23.692,116.580,66.557)
C8: (24.837,114.543,64.997)
C2: (28.830,116.154,64.221)
C6: (27.991,113.961,63.526)
C5: (26.793,114.364,64.177)
C4: (26.749,115.607,64.765)
P: (20.053,114.811,64.959)
C4': (22.691,117.509,66.060)
C2': (24.735,118.060,65.029)
O2': (25.014,119.277,65.701)
N1: (28.973,114.940,63.607)
N2: (29.895,116.961,64.173)
N3: (27.721,116.546,64.829)
N7: (25.584,113.700,64.336)
N9: (25.483,115.723,65.283)
O5': (21.368,115.676,65.198)
O3': (22.689,119.055,64.161)
OP2: (20.343,113.857,63.859)
C3': (23.258,117.882,64.705)
C1': (24.957,116.892,65.984)
C5': (21.340,116.839,66.049)
O6: (28.230,112.906,62.925)
O4': (23.692,116.580,66.557)
C8: (24.837,114.543,64.997)
C2: (28.830,116.154,64.221)
C6: (27.991,113.961,63.526)
C5: (26.793,114.364,64.177)
C4: (26.749,115.607,64.765)
P: (20.053,114.811,64.959)
C4': (22.691,117.509,66.060)
C2': (24.735,118.060,65.029)
O2': (25.014,119.277,65.701)
N1: (28.973,114.940,63.607)
N2: (29.895,116.961,64.173)
N3: (27.721,116.546,64.829)
N7: (25.584,113.700,64.336)
N9: (25.483,115.723,65.283)
O5': (21.368,115.676,65.198)
O3': (22.689,119.055,64.161)
C2: (32.213,114.556,61.656)
OP1: (38.891,118.358,61.149)
OP2: (38.217,116.325,59.695)
C4: (33.324,113.092,60.229)
O5': (36.540,117.658,60.975)
C3': (34.712,117.634,63.074)
C1': (32.859,116.923,61.804)
O4': (33.590,117.856,61.034)
C5': (35.773,118.857,61.136)
P: (37.931,117.702,60.214)
O2: (31.342,114.808,62.499)
C4': (34.513,118.558,61.888)
C2': (33.321,117.050,63.258)
O2': (32.465,117.947,63.926)
N1: (33.049,115.584,61.231)
N3: (32.374,113.314,61.139)
N4: (33.453,111.859,59.742)
C6: (34.017,115.346,60.300)
C5: (34.187,114.128,59.776)
O3': (35.163,118.387,64.196)
OP1: (38.891,118.358,61.149)
OP2: (38.217,116.325,59.695)
C4: (33.324,113.092,60.229)
O5': (36.540,117.658,60.975)
C3': (34.712,117.634,63.074)
C1': (32.859,116.923,61.804)
O4': (33.590,117.856,61.034)
C5': (35.773,118.857,61.136)
P: (37.931,117.702,60.214)
O2: (31.342,114.808,62.499)
C4': (34.513,118.558,61.888)
C2': (33.321,117.050,63.258)
O2': (32.465,117.947,63.926)
N1: (33.049,115.584,61.231)
N3: (32.374,113.314,61.139)
N4: (33.453,111.859,59.742)
C6: (34.017,115.346,60.300)
C5: (34.187,114.128,59.776)
O3': (35.163,118.387,64.196)
Image (generated by PyMOL):