Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01261:01312
Extra
PDB:
ATOM 1 O3' C A1260 19.746 113.865 66.129 1.00 34.92 O
ATOM 2 P G A1261 19.804 114.605 64.708 1.00 34.74 P
ATOM 3 OP1 G A1261 18.622 115.475 64.606 1.00 34.59 O
ATOM 4 OP2 G A1261 20.086 113.609 63.654 1.00 34.40 O
ATOM 5 O5' G A1261 21.057 115.566 64.817 1.00 37.42 O
ATOM 6 C5' G A1261 21.042 116.673 65.716 1.00 36.72 C
ATOM 7 C4' G A1261 22.399 117.321 65.749 1.00 38.85 C
ATOM 8 O4' G A1261 23.383 116.384 66.272 1.00 38.66 O
ATOM 9 C3' G A1261 23.000 117.698 64.407 1.00 38.21 C
ATOM 10 O3' G A1261 22.442 118.878 63.857 1.00 37.85 O
ATOM 11 C2' G A1261 24.463 117.882 64.783 1.00 39.02 C
ATOM 12 O2' G A1261 24.691 119.102 65.469 1.00 39.80 O
ATOM 13 C1' G A1261 24.663 116.705 65.742 1.00 37.99 C
ATOM 14 N9 G A1261 25.211 115.537 65.057 1.00 36.49 N
ATOM 15 C8 G A1261 24.579 114.350 64.764 1.00 35.56 C
ATOM 16 N7 G A1261 25.345 113.509 64.120 1.00 34.85 N
ATOM 17 C5 G A1261 26.555 114.179 63.982 1.00 35.93 C
ATOM 18 C6 G A1261 27.774 113.782 63.351 1.00 36.35 C
ATOM 19 O6 G A1261 28.037 112.724 62.769 1.00 38.73 O
ATOM 20 N1 G A1261 28.741 114.773 63.439 1.00 35.17 N
ATOM 21 C2 G A1261 28.571 115.987 64.045 1.00 35.75 C
ATOM 22 N2 G A1261 29.624 116.805 64.018 1.00 35.35 N
ATOM 23 N3 G A1261 27.450 116.374 64.632 1.00 36.23 N
ATOM 24 C4 G A1261 26.490 115.427 64.561 1.00 36.09 C
ATOM 25 P C A1262 22.638 119.191 62.294 1.00 37.77 P
ATOM 26 OP1 C A1262 21.839 120.411 61.997 1.00 37.93 O
ATOM 27 OP2 C A1262 22.405 117.952 61.524 1.00 37.53 O
ATOM 28 O5' C A1262 24.182 119.548 62.164 1.00 39.04 O
TER
ATOM 1 O3' A B1311 37.469 118.635 58.738 1.00 54.02 O
ATOM 2 P C B1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 3 OP1 C B1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 4 OP2 C B1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 5 O5' C B1312 36.346 117.480 60.609 1.00 51.22 O
ATOM 6 C5' C B1312 35.552 118.670 60.777 1.00 45.07 C
ATOM 7 C4' C B1312 34.316 118.362 61.567 1.00 40.67 C
ATOM 8 O4' C B1312 33.358 117.674 60.738 1.00 38.77 O
ATOM 9 C3' C B1312 34.539 117.442 62.750 1.00 39.71 C
ATOM 10 O3' C B1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 11 C2' C B1312 33.151 116.856 62.962 1.00 39.39 C
ATOM 12 O2' C B1312 32.298 117.747 63.642 1.00 43.69 O
ATOM 13 C1' C B1312 32.650 116.733 61.521 1.00 38.71 C
ATOM 14 N1 C B1312 32.815 115.400 60.920 1.00 36.89 N
ATOM 15 C2 C B1312 31.982 114.367 61.342 1.00 35.62 C
ATOM 16 O2 C B1312 31.160 114.591 62.240 1.00 35.70 O
ATOM 17 N3 C B1312 32.094 113.149 60.767 1.00 36.54 N
ATOM 18 C4 C B1312 33.001 112.943 59.810 1.00 37.33 C
ATOM 19 N4 C B1312 33.055 111.734 59.243 1.00 35.26 N
ATOM 20 C5 C B1312 33.886 113.972 59.380 1.00 38.47 C
ATOM 21 C6 C B1312 33.758 115.174 59.955 1.00 37.96 C
ATOM 22 P G B1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 23 OP1 G B1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 24 OP2 G B1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 25 O5' G B1313 34.457 117.923 66.259 1.00 34.72 O
TER
ATOM 2 P G A1261 19.804 114.605 64.708 1.00 34.74 P
ATOM 3 OP1 G A1261 18.622 115.475 64.606 1.00 34.59 O
ATOM 4 OP2 G A1261 20.086 113.609 63.654 1.00 34.40 O
ATOM 5 O5' G A1261 21.057 115.566 64.817 1.00 37.42 O
ATOM 6 C5' G A1261 21.042 116.673 65.716 1.00 36.72 C
ATOM 7 C4' G A1261 22.399 117.321 65.749 1.00 38.85 C
ATOM 8 O4' G A1261 23.383 116.384 66.272 1.00 38.66 O
ATOM 9 C3' G A1261 23.000 117.698 64.407 1.00 38.21 C
ATOM 10 O3' G A1261 22.442 118.878 63.857 1.00 37.85 O
ATOM 11 C2' G A1261 24.463 117.882 64.783 1.00 39.02 C
ATOM 12 O2' G A1261 24.691 119.102 65.469 1.00 39.80 O
ATOM 13 C1' G A1261 24.663 116.705 65.742 1.00 37.99 C
ATOM 14 N9 G A1261 25.211 115.537 65.057 1.00 36.49 N
ATOM 15 C8 G A1261 24.579 114.350 64.764 1.00 35.56 C
ATOM 16 N7 G A1261 25.345 113.509 64.120 1.00 34.85 N
ATOM 17 C5 G A1261 26.555 114.179 63.982 1.00 35.93 C
ATOM 18 C6 G A1261 27.774 113.782 63.351 1.00 36.35 C
ATOM 19 O6 G A1261 28.037 112.724 62.769 1.00 38.73 O
ATOM 20 N1 G A1261 28.741 114.773 63.439 1.00 35.17 N
ATOM 21 C2 G A1261 28.571 115.987 64.045 1.00 35.75 C
ATOM 22 N2 G A1261 29.624 116.805 64.018 1.00 35.35 N
ATOM 23 N3 G A1261 27.450 116.374 64.632 1.00 36.23 N
ATOM 24 C4 G A1261 26.490 115.427 64.561 1.00 36.09 C
ATOM 25 P C A1262 22.638 119.191 62.294 1.00 37.77 P
ATOM 26 OP1 C A1262 21.839 120.411 61.997 1.00 37.93 O
ATOM 27 OP2 C A1262 22.405 117.952 61.524 1.00 37.53 O
ATOM 28 O5' C A1262 24.182 119.548 62.164 1.00 39.04 O
TER
ATOM 1 O3' A B1311 37.469 118.635 58.738 1.00 54.02 O
ATOM 2 P C B1312 37.776 117.579 59.923 1.00 55.67 P
ATOM 3 OP1 C B1312 38.686 118.212 60.923 1.00 53.13 O
ATOM 4 OP2 C B1312 38.114 116.241 59.363 1.00 55.18 O
ATOM 5 O5' C B1312 36.346 117.480 60.609 1.00 51.22 O
ATOM 6 C5' C B1312 35.552 118.670 60.777 1.00 45.07 C
ATOM 7 C4' C B1312 34.316 118.362 61.567 1.00 40.67 C
ATOM 8 O4' C B1312 33.358 117.674 60.738 1.00 38.77 O
ATOM 9 C3' C B1312 34.539 117.442 62.750 1.00 39.71 C
ATOM 10 O3' C B1312 35.016 118.204 63.855 1.00 37.34 O
ATOM 11 C2' C B1312 33.151 116.856 62.962 1.00 39.39 C
ATOM 12 O2' C B1312 32.298 117.747 63.642 1.00 43.69 O
ATOM 13 C1' C B1312 32.650 116.733 61.521 1.00 38.71 C
ATOM 14 N1 C B1312 32.815 115.400 60.920 1.00 36.89 N
ATOM 15 C2 C B1312 31.982 114.367 61.342 1.00 35.62 C
ATOM 16 O2 C B1312 31.160 114.591 62.240 1.00 35.70 O
ATOM 17 N3 C B1312 32.094 113.149 60.767 1.00 36.54 N
ATOM 18 C4 C B1312 33.001 112.943 59.810 1.00 37.33 C
ATOM 19 N4 C B1312 33.055 111.734 59.243 1.00 35.26 N
ATOM 20 C5 C B1312 33.886 113.972 59.380 1.00 38.47 C
ATOM 21 C6 C B1312 33.758 115.174 59.955 1.00 37.96 C
ATOM 22 P G B1313 35.536 117.472 65.181 1.00 36.02 P
ATOM 23 OP1 G B1313 36.827 118.106 65.545 1.00 33.86 O
ATOM 24 OP2 G B1313 35.468 115.998 65.006 1.00 33.86 O
ATOM 25 O5' G B1313 34.457 117.923 66.259 1.00 34.72 O
TER
Atoms:
OP1: (18.622,115.475,64.606)
OP2: (20.086,113.609,63.654)
C3': (23.000,117.698,64.407)
C1': (24.663,116.705,65.742)
C5': (21.042,116.673,65.716)
O6: (28.037,112.724,62.769)
O4': (23.383,116.384,66.272)
C8: (24.579,114.350,64.764)
C2: (28.571,115.987,64.045)
C6: (27.774,113.782,63.351)
C5: (26.555,114.179,63.982)
C4: (26.490,115.427,64.561)
P: (19.804,114.605,64.708)
C4': (22.399,117.321,65.749)
C2': (24.463,117.882,64.783)
O2': (24.691,119.102,65.469)
N1: (28.741,114.773,63.439)
N2: (29.624,116.805,64.018)
N3: (27.450,116.374,64.632)
N7: (25.345,113.509,64.120)
N9: (25.211,115.537,65.057)
O5': (21.057,115.566,64.817)
O3': (22.442,118.878,63.857)
OP2: (20.086,113.609,63.654)
C3': (23.000,117.698,64.407)
C1': (24.663,116.705,65.742)
C5': (21.042,116.673,65.716)
O6: (28.037,112.724,62.769)
O4': (23.383,116.384,66.272)
C8: (24.579,114.350,64.764)
C2: (28.571,115.987,64.045)
C6: (27.774,113.782,63.351)
C5: (26.555,114.179,63.982)
C4: (26.490,115.427,64.561)
P: (19.804,114.605,64.708)
C4': (22.399,117.321,65.749)
C2': (24.463,117.882,64.783)
O2': (24.691,119.102,65.469)
N1: (28.741,114.773,63.439)
N2: (29.624,116.805,64.018)
N3: (27.450,116.374,64.632)
N7: (25.345,113.509,64.120)
N9: (25.211,115.537,65.057)
O5': (21.057,115.566,64.817)
O3': (22.442,118.878,63.857)
C2: (31.982,114.367,61.342)
OP1: (38.686,118.212,60.923)
OP2: (38.114,116.241,59.363)
C4: (33.001,112.943,59.810)
O5': (36.346,117.480,60.609)
C3': (34.539,117.442,62.750)
C1': (32.650,116.733,61.521)
O4': (33.358,117.674,60.738)
C5': (35.552,118.670,60.777)
P: (37.776,117.579,59.923)
O2: (31.160,114.591,62.240)
C4': (34.316,118.362,61.567)
C2': (33.151,116.856,62.962)
O2': (32.298,117.747,63.642)
N1: (32.815,115.400,60.920)
N3: (32.094,113.149,60.767)
N4: (33.055,111.734,59.243)
C6: (33.758,115.174,59.955)
C5: (33.886,113.972,59.380)
O3': (35.016,118.204,63.855)
OP1: (38.686,118.212,60.923)
OP2: (38.114,116.241,59.363)
C4: (33.001,112.943,59.810)
O5': (36.346,117.480,60.609)
C3': (34.539,117.442,62.750)
C1': (32.650,116.733,61.521)
O4': (33.358,117.674,60.738)
C5': (35.552,118.670,60.777)
P: (37.776,117.579,59.923)
O2: (31.160,114.591,62.240)
C4': (34.316,118.362,61.567)
C2': (33.151,116.856,62.962)
O2': (32.298,117.747,63.642)
N1: (32.815,115.400,60.920)
N3: (32.094,113.149,60.767)
N4: (33.055,111.734,59.243)
C6: (33.758,115.174,59.955)
C5: (33.886,113.972,59.380)
O3': (35.016,118.204,63.855)
Image (generated by PyMOL):