ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:92:924

Extra

PDB:
ATOM 1 O3' U A 1 54.081 12.189 103.276 1.00115.72 O
ATOM 2 P A A 2 54.280 13.096 101.950 1.00110.01 P
ATOM 3 OP1 A A 2 52.995 13.748 101.622 1.00109.56 O
ATOM 4 OP2 A A 2 54.946 12.258 100.920 1.00110.49 O
ATOM 5 O5' A A 2 55.325 14.218 102.393 1.00101.58 O
ATOM 6 C5' A A 2 54.894 15.504 102.874 1.00 88.39 C
ATOM 7 C4' A A 2 56.092 16.338 103.261 1.00 80.12 C
ATOM 8 O4' A A 2 56.795 15.695 104.350 1.00 78.62 O
ATOM 9 C3' A A 2 57.146 16.549 102.184 1.00 75.43 C
ATOM 10 O3' A A 2 57.863 17.754 102.419 1.00 67.81 O
ATOM 11 C2' A A 2 58.052 15.336 102.361 1.00 76.02 C
ATOM 12 O2' A A 2 59.387 15.588 101.968 1.00 76.74 O
ATOM 13 C1' A A 2 57.961 15.059 103.866 1.00 77.40 C
ATOM 14 N9 A A 2 57.832 13.630 104.171 1.00 78.53 N
ATOM 15 C8 A A 2 57.671 12.584 103.290 1.00 78.22 C
ATOM 16 N7 A A 2 57.570 11.413 103.867 1.00 78.16 N
ATOM 17 C5 A A 2 57.674 11.699 105.220 1.00 79.01 C
ATOM 18 C6 A A 2 57.646 10.880 106.363 1.00 79.06 C
ATOM 19 N6 A A 2 57.514 9.552 106.320 1.00 79.30 N
ATOM 20 N1 A A 2 57.766 11.480 107.567 1.00 78.87 N
ATOM 21 C2 A A 2 57.914 12.809 107.608 1.00 78.74 C
ATOM 22 N3 A A 2 57.964 13.686 106.606 1.00 79.14 N
ATOM 23 C4 A A 2 57.835 13.060 105.423 1.00 78.88 C
ATOM 24 P G A 3 57.680 19.007 101.427 1.00 61.40 P
ATOM 25 OP1 G A 3 58.876 19.854 101.633 1.00 62.02 O
ATOM 26 OP2 G A 3 56.325 19.578 101.655 1.00 60.55 O
ATOM 27 O5' G A 3 57.725 18.404 99.949 1.00 55.17 O
TER

ATOM 1 O3' U B 23 61.564 1.860 99.963 1.00115.64 O
ATOM 2 P G B 24 61.524 3.193 99.068 1.00109.88 P
ATOM 3 OP1 G B 24 62.235 2.897 97.794 1.00109.42 O
ATOM 4 OP2 G B 24 61.968 4.333 99.907 1.00110.15 O
ATOM 5 O5' G B 24 59.975 3.388 98.761 1.00105.48 O
ATOM 6 C5' G B 24 59.453 3.263 97.424 1.00 97.99 C
ATOM 7 C4' G B 24 58.512 4.408 97.132 1.00 91.58 C
ATOM 8 O4' G B 24 57.461 4.410 98.136 1.00 89.91 O
ATOM 9 C3' G B 24 59.137 5.790 97.242 1.00 87.93 C
ATOM 10 O3' G B 24 59.798 6.178 96.043 1.00 83.10 O
ATOM 11 C2' G B 24 57.937 6.658 97.584 1.00 87.20 C
ATOM 12 O2' G B 24 57.110 6.922 96.470 1.00 86.29 O
ATOM 13 C1' G B 24 57.194 5.738 98.551 1.00 87.47 C
ATOM 14 N9 G B 24 57.650 5.883 99.933 1.00 86.46 N
ATOM 15 C8 G B 24 58.272 4.936 100.716 1.00 85.87 C
ATOM 16 N7 G B 24 58.539 5.361 101.922 1.00 85.23 N
ATOM 17 C5 G B 24 58.067 6.666 101.937 1.00 85.24 C
ATOM 18 C6 G B 24 58.062 7.632 102.976 1.00 84.46 C
ATOM 19 O6 G B 24 58.464 7.520 104.132 1.00 83.45 O
ATOM 20 N1 G B 24 57.505 8.833 102.554 1.00 85.19 N
ATOM 21 C2 G B 24 57.007 9.075 101.298 1.00 86.19 C
ATOM 22 N2 G B 24 56.533 10.302 101.079 1.00 86.27 N
ATOM 23 N3 G B 24 56.984 8.180 100.328 1.00 86.63 N
ATOM 24 C4 G B 24 57.527 7.007 100.713 1.00 86.28 C
ATOM 25 P C B 25 61.095 7.127 96.118 1.00 78.10 P
ATOM 26 OP1 C B 25 61.563 7.298 94.723 1.00 77.84 O
ATOM 27 OP2 C B 25 62.034 6.617 97.148 1.00 78.00 O
ATOM 28 O5' C B 25 60.518 8.513 96.640 1.00 74.44 O
TER

Atoms:
OP1: (52.995,13.748,101.622)
OP2: (54.946,12.258,100.920)
C3': (57.146,16.549,102.184)
C1': (57.961,15.059,103.866)
C5': (54.894,15.504,102.874)
O4': (56.795,15.695,104.350)
C8: (57.671,12.584,103.290)
O2': (59.387,15.588,101.968)
C6: (57.646,10.880,106.363)
C5: (57.674,11.699,105.220)
C4: (57.835,13.060,105.423)
P: (54.280,13.096,101.950)
C4': (56.092,16.338,103.261)
C2': (58.052,15.336,102.361)
C2: (57.914,12.809,107.608)
N1: (57.766,11.480,107.567)
N3: (57.964,13.686,106.606)
N6: (57.514,9.552,106.320)
N7: (57.570,11.413,103.867)
N9: (57.832,13.630,104.171)
O5': (55.325,14.218,102.393)
O3': (57.863,17.754,102.419)
OP1: (62.235,2.897,97.794)
OP2: (61.968,4.333,99.907)
C3': (59.137,5.790,97.242)
C1': (57.194,5.738,98.551)
C5': (59.453,3.263,97.424)
O6: (58.464,7.520,104.132)
O4': (57.461,4.410,98.136)
C8: (58.272,4.936,100.716)
C2: (57.007,9.075,101.298)
C6: (58.062,7.632,102.976)
C5: (58.067,6.666,101.937)
C4: (57.527,7.007,100.713)
P: (61.524,3.193,99.068)
C4': (58.512,4.408,97.132)
C2': (57.937,6.658,97.584)
O2': (57.110,6.922,96.470)
N1: (57.505,8.833,102.554)
N2: (56.533,10.302,101.079)
N3: (56.984,8.180,100.328)
N7: (58.539,5.361,101.922)
N9: (57.650,5.883,99.933)
O5': (59.975,3.388,98.761)
O3': (59.798,6.178,96.043)
Image (generated by PyMOL):
PyMOL image
show in jmol