ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC4:0273:0355

Extra

PDB:
ATOM 1 O3' C A 272 61.498 107.709 -4.716 1.00127.40 O
ATOM 2 P A A 273 61.562 107.745 -3.116 1.00124.88 P
ATOM 3 OP1 A A 273 60.309 107.119 -2.613 1.00124.87 O
ATOM 4 OP2 A A 273 61.909 109.128 -2.698 1.00125.61 O
ATOM 5 O5' A A 273 62.797 106.793 -2.775 1.00120.71 O
ATOM 6 C5' A A 273 62.592 105.489 -2.195 1.00113.59 C
ATOM 7 C4' A A 273 63.873 104.980 -1.575 1.00108.38 C
ATOM 8 O4' A A 273 64.821 104.624 -2.616 1.00106.49 O
ATOM 9 C3' A A 273 64.639 105.966 -0.706 1.00105.36 C
ATOM 10 O3' A A 273 64.089 106.088 0.603 1.00101.70 O
ATOM 11 C2' A A 273 66.038 105.365 -0.709 1.00104.53 C
ATOM 12 O2' A A 273 66.164 104.276 0.184 1.00103.51 O
ATOM 13 C1' A A 273 66.145 104.859 -2.153 1.00104.44 C
ATOM 14 N9 A A 273 66.798 105.812 -3.058 1.00102.46 N
ATOM 15 C8 A A 273 66.235 106.546 -4.077 1.00101.70 C
ATOM 16 N7 A A 273 67.084 107.330 -4.697 1.00100.38 N
ATOM 17 C5 A A 273 68.289 107.095 -4.048 1.00 99.52 C
ATOM 18 C6 A A 273 69.580 107.625 -4.228 1.00 98.55 C
ATOM 19 N6 A A 273 69.888 108.542 -5.148 1.00 97.11 N
ATOM 20 N1 A A 273 70.559 107.175 -3.415 1.00 98.59 N
ATOM 21 C2 A A 273 70.252 106.260 -2.486 1.00 98.70 C
ATOM 22 N3 A A 273 69.081 105.691 -2.218 1.00 99.08 N
ATOM 23 C4 A A 273 68.129 106.157 -3.042 1.00100.25 C
ATOM 24 P U A 274 63.907 107.548 1.261 1.00 99.58 P
ATOM 25 OP1 U A 274 63.244 107.355 2.576 1.00 99.09 O
ATOM 26 OP2 U A 274 63.292 108.460 0.257 1.00 98.40 O
ATOM 27 O5' U A 274 65.396 108.047 1.531 1.00 96.10 O
TER

ATOM 1 O3' U B 354 73.120 112.287 -9.616 1.00 90.49 O
ATOM 2 P G B 355 73.272 111.138 -10.734 1.00 91.14 P
ATOM 3 OP1 G B 355 74.688 111.173 -11.182 1.00 91.30 O
ATOM 4 OP2 G B 355 72.180 111.281 -11.735 1.00 90.68 O
ATOM 5 O5' G B 355 73.050 109.779 -9.934 1.00 91.29 O
ATOM 6 C5' G B 355 73.683 109.564 -8.658 1.00 92.69 C
ATOM 7 C4' G B 355 72.838 108.646 -7.809 1.00 93.83 C
ATOM 8 O4' G B 355 71.488 109.184 -7.767 1.00 93.49 O
ATOM 9 C3' G B 355 72.702 107.212 -8.313 1.00 95.14 C
ATOM 10 O3' G B 355 72.516 106.347 -7.196 1.00 97.35 O
ATOM 11 C2' G B 355 71.432 107.277 -9.156 1.00 94.64 C
ATOM 12 O2' G B 355 70.776 106.028 -9.287 1.00 94.66 O
ATOM 13 C1' G B 355 70.586 108.268 -8.357 1.00 93.42 C
ATOM 14 N9 G B 355 69.654 109.026 -9.186 1.00 92.58 N
ATOM 15 C8 G B 355 69.946 109.725 -10.335 1.00 92.71 C
ATOM 16 N7 G B 355 68.900 110.293 -10.869 1.00 92.85 N
ATOM 17 C5 G B 355 67.854 109.952 -10.023 1.00 92.40 C
ATOM 18 C6 G B 355 66.476 110.276 -10.093 1.00 92.71 C
ATOM 19 O6 G B 355 65.883 110.948 -10.949 1.00 93.17 O
ATOM 20 N1 G B 355 65.769 109.728 -9.026 1.00 92.34 N
ATOM 21 C2 G B 355 66.317 108.968 -8.022 1.00 91.38 C
ATOM 22 N2 G B 355 65.472 108.537 -7.078 1.00 91.39 N
ATOM 23 N3 G B 355 67.599 108.656 -7.949 1.00 90.96 N
ATOM 24 C4 G B 355 68.304 109.176 -8.975 1.00 91.91 C
ATOM 25 P C B 356 73.183 104.882 -7.187 1.00 98.72 P
ATOM 26 OP1 C B 356 74.434 104.960 -6.381 1.00 98.26 O
ATOM 27 OP2 C B 356 73.239 104.369 -8.581 1.00 98.28 O
ATOM 28 O5' C B 356 72.126 104.013 -6.372 1.00 99.02 O
TER

Atoms:
OP1: (60.309,107.119,-2.613)
OP2: (61.909,109.128,-2.698)
C3': (64.639,105.966,-0.706)
C1': (66.145,104.859,-2.153)
C5': (62.592,105.489,-2.195)
O4': (64.821,104.624,-2.616)
C8: (66.235,106.546,-4.077)
O2': (66.164,104.276,0.184)
C6: (69.580,107.625,-4.228)
C5: (68.289,107.095,-4.048)
C4: (68.129,106.157,-3.042)
P: (61.562,107.745,-3.116)
C4': (63.873,104.980,-1.575)
C2': (66.038,105.365,-0.709)
C2: (70.252,106.260,-2.486)
N1: (70.559,107.175,-3.415)
N3: (69.081,105.691,-2.218)
N6: (69.888,108.542,-5.148)
N7: (67.084,107.330,-4.697)
N9: (66.798,105.812,-3.058)
O5': (62.797,106.793,-2.775)
O3': (64.089,106.088,0.603)
OP1: (74.688,111.173,-11.182)
OP2: (72.180,111.281,-11.735)
C3': (72.702,107.212,-8.313)
C1': (70.586,108.268,-8.357)
C5': (73.683,109.564,-8.658)
O6: (65.883,110.948,-10.949)
O4': (71.488,109.184,-7.767)
C8: (69.946,109.725,-10.335)
C2: (66.317,108.968,-8.022)
C6: (66.476,110.276,-10.093)
C5: (67.854,109.952,-10.023)
C4: (68.304,109.176,-8.975)
P: (73.272,111.138,-10.734)
C4': (72.838,108.646,-7.809)
C2': (71.432,107.277,-9.156)
O2': (70.776,106.028,-9.287)
N1: (65.769,109.728,-9.026)
N2: (65.472,108.537,-7.078)
N3: (67.599,108.656,-7.949)
N7: (68.900,110.293,-10.869)
N9: (69.654,109.026,-9.186)
O5': (73.050,109.779,-9.934)
O3': (72.516,106.347,-7.196)
Image (generated by PyMOL):
PyMOL image
show in jmol