Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01351:01353
Extra
PDB:
ATOM 1 O3' G A1350 41.795 179.077 84.049 1.00 47.59 O
ATOM 2 P A A1351 42.807 180.047 84.855 1.00 49.50 P
ATOM 3 OP1 A A1351 42.619 179.739 86.295 1.00 47.85 O
ATOM 4 OP2 A A1351 42.657 181.453 84.382 1.00 49.48 O
ATOM 5 O5' A A1351 44.256 179.534 84.430 1.00 48.78 O
ATOM 6 C5' A A1351 44.563 178.134 84.436 1.00 45.44 C
ATOM 7 C4' A A1351 46.048 177.916 84.562 1.00 44.72 C
ATOM 8 O4' A A1351 46.700 178.264 83.308 1.00 44.09 O
ATOM 9 C3' A A1351 46.759 178.711 85.657 1.00 44.27 C
ATOM 10 O3' A A1351 47.690 177.870 86.322 1.00 47.09 O
ATOM 11 C2' A A1351 47.518 179.775 84.866 1.00 44.10 C
ATOM 12 O2' A A1351 48.713 180.182 85.498 1.00 42.69 O
ATOM 13 C1' A A1351 47.861 179.011 83.592 1.00 44.25 C
ATOM 14 N9 A A1351 48.217 179.822 82.421 1.00 44.05 N
ATOM 15 C8 A A1351 47.935 181.143 82.163 1.00 42.91 C
ATOM 16 N7 A A1351 48.411 181.573 81.020 1.00 41.99 N
ATOM 17 C5 A A1351 49.045 180.462 80.482 1.00 42.25 C
ATOM 18 C6 A A1351 49.754 180.261 79.283 1.00 41.98 C
ATOM 19 N6 A A1351 49.948 181.208 78.366 1.00 41.41 N
ATOM 20 N1 A A1351 50.269 179.034 79.055 1.00 41.80 N
ATOM 21 C2 A A1351 50.086 178.083 79.975 1.00 40.79 C
ATOM 22 N3 A A1351 49.444 178.148 81.137 1.00 41.69 N
ATOM 23 C4 A A1351 48.937 179.378 81.334 1.00 43.18 C
ATOM 24 P A A1352 47.302 177.234 87.745 1.00 49.11 P
ATOM 25 OP1 A A1352 46.729 175.888 87.496 1.00 49.25 O
ATOM 26 OP2 A A1352 46.518 178.237 88.508 1.00 48.22 O
ATOM 27 O5' A A1352 48.695 177.035 88.483 1.00 47.99 O
TER
ATOM 1 O3' A B1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 2 P C B1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 3 OP1 C B1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 4 OP2 C B1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 5 O5' C B1353 52.777 177.588 84.955 1.00 41.20 O
ATOM 6 C5' C B1353 54.118 178.089 85.047 1.00 38.89 C
ATOM 7 C4' C B1353 55.099 176.948 85.097 1.00 38.23 C
ATOM 8 O4' C B1353 54.763 176.060 86.196 1.00 37.81 O
ATOM 9 C3' C B1353 55.103 176.034 83.889 1.00 36.78 C
ATOM 10 O3' C B1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 11 C2' C B1353 55.724 174.767 84.453 1.00 36.80 C
ATOM 12 O2' C B1353 57.124 174.876 84.599 1.00 35.42 O
ATOM 13 C1' C B1353 55.076 174.720 85.835 1.00 36.69 C
ATOM 14 N1 C B1353 53.835 173.920 85.863 1.00 37.42 N
ATOM 15 C2 C B1353 53.928 172.520 85.874 1.00 37.10 C
ATOM 16 O2 C B1353 55.047 171.988 85.806 1.00 38.70 O
ATOM 17 N3 C B1353 52.798 171.786 85.955 1.00 36.32 N
ATOM 18 C4 C B1353 51.615 172.392 86.016 1.00 35.73 C
ATOM 19 N4 C B1353 50.533 171.632 86.129 1.00 36.12 N
ATOM 20 C5 C B1353 51.488 173.807 85.973 1.00 36.67 C
ATOM 21 C6 C B1353 52.610 174.526 85.896 1.00 36.37 C
ATOM 22 P C B1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 23 OP1 C B1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 24 OP2 C B1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 25 O5' C B1354 56.012 177.005 80.399 1.00 36.50 O
TER
ATOM 2 P A A1351 42.807 180.047 84.855 1.00 49.50 P
ATOM 3 OP1 A A1351 42.619 179.739 86.295 1.00 47.85 O
ATOM 4 OP2 A A1351 42.657 181.453 84.382 1.00 49.48 O
ATOM 5 O5' A A1351 44.256 179.534 84.430 1.00 48.78 O
ATOM 6 C5' A A1351 44.563 178.134 84.436 1.00 45.44 C
ATOM 7 C4' A A1351 46.048 177.916 84.562 1.00 44.72 C
ATOM 8 O4' A A1351 46.700 178.264 83.308 1.00 44.09 O
ATOM 9 C3' A A1351 46.759 178.711 85.657 1.00 44.27 C
ATOM 10 O3' A A1351 47.690 177.870 86.322 1.00 47.09 O
ATOM 11 C2' A A1351 47.518 179.775 84.866 1.00 44.10 C
ATOM 12 O2' A A1351 48.713 180.182 85.498 1.00 42.69 O
ATOM 13 C1' A A1351 47.861 179.011 83.592 1.00 44.25 C
ATOM 14 N9 A A1351 48.217 179.822 82.421 1.00 44.05 N
ATOM 15 C8 A A1351 47.935 181.143 82.163 1.00 42.91 C
ATOM 16 N7 A A1351 48.411 181.573 81.020 1.00 41.99 N
ATOM 17 C5 A A1351 49.045 180.462 80.482 1.00 42.25 C
ATOM 18 C6 A A1351 49.754 180.261 79.283 1.00 41.98 C
ATOM 19 N6 A A1351 49.948 181.208 78.366 1.00 41.41 N
ATOM 20 N1 A A1351 50.269 179.034 79.055 1.00 41.80 N
ATOM 21 C2 A A1351 50.086 178.083 79.975 1.00 40.79 C
ATOM 22 N3 A A1351 49.444 178.148 81.137 1.00 41.69 N
ATOM 23 C4 A A1351 48.937 179.378 81.334 1.00 43.18 C
ATOM 24 P A A1352 47.302 177.234 87.745 1.00 49.11 P
ATOM 25 OP1 A A1352 46.729 175.888 87.496 1.00 49.25 O
ATOM 26 OP2 A A1352 46.518 178.237 88.508 1.00 48.22 O
ATOM 27 O5' A A1352 48.695 177.035 88.483 1.00 47.99 O
TER
ATOM 1 O3' A B1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 2 P C B1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 3 OP1 C B1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 4 OP2 C B1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 5 O5' C B1353 52.777 177.588 84.955 1.00 41.20 O
ATOM 6 C5' C B1353 54.118 178.089 85.047 1.00 38.89 C
ATOM 7 C4' C B1353 55.099 176.948 85.097 1.00 38.23 C
ATOM 8 O4' C B1353 54.763 176.060 86.196 1.00 37.81 O
ATOM 9 C3' C B1353 55.103 176.034 83.889 1.00 36.78 C
ATOM 10 O3' C B1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 11 C2' C B1353 55.724 174.767 84.453 1.00 36.80 C
ATOM 12 O2' C B1353 57.124 174.876 84.599 1.00 35.42 O
ATOM 13 C1' C B1353 55.076 174.720 85.835 1.00 36.69 C
ATOM 14 N1 C B1353 53.835 173.920 85.863 1.00 37.42 N
ATOM 15 C2 C B1353 53.928 172.520 85.874 1.00 37.10 C
ATOM 16 O2 C B1353 55.047 171.988 85.806 1.00 38.70 O
ATOM 17 N3 C B1353 52.798 171.786 85.955 1.00 36.32 N
ATOM 18 C4 C B1353 51.615 172.392 86.016 1.00 35.73 C
ATOM 19 N4 C B1353 50.533 171.632 86.129 1.00 36.12 N
ATOM 20 C5 C B1353 51.488 173.807 85.973 1.00 36.67 C
ATOM 21 C6 C B1353 52.610 174.526 85.896 1.00 36.37 C
ATOM 22 P C B1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 23 OP1 C B1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 24 OP2 C B1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 25 O5' C B1354 56.012 177.005 80.399 1.00 36.50 O
TER
Atoms:
OP1: (42.619,179.739,86.295)
OP2: (42.657,181.453,84.382)
C3': (46.759,178.711,85.657)
C1': (47.861,179.011,83.592)
C5': (44.563,178.134,84.436)
O4': (46.700,178.264,83.308)
C8: (47.935,181.143,82.163)
O2': (48.713,180.182,85.498)
C6: (49.754,180.261,79.283)
C5: (49.045,180.462,80.482)
C4: (48.937,179.378,81.334)
P: (42.807,180.047,84.855)
C4': (46.048,177.916,84.562)
C2': (47.518,179.775,84.866)
C2: (50.086,178.083,79.975)
N1: (50.269,179.034,79.055)
N3: (49.444,178.148,81.137)
N6: (49.948,181.208,78.366)
N7: (48.411,181.573,81.020)
N9: (48.217,179.822,82.421)
O5': (44.256,179.534,84.430)
O3': (47.690,177.870,86.322)
OP2: (42.657,181.453,84.382)
C3': (46.759,178.711,85.657)
C1': (47.861,179.011,83.592)
C5': (44.563,178.134,84.436)
O4': (46.700,178.264,83.308)
C8: (47.935,181.143,82.163)
O2': (48.713,180.182,85.498)
C6: (49.754,180.261,79.283)
C5: (49.045,180.462,80.482)
C4: (48.937,179.378,81.334)
P: (42.807,180.047,84.855)
C4': (46.048,177.916,84.562)
C2': (47.518,179.775,84.866)
C2: (50.086,178.083,79.975)
N1: (50.269,179.034,79.055)
N3: (49.444,178.148,81.137)
N6: (49.948,181.208,78.366)
N7: (48.411,181.573,81.020)
N9: (48.217,179.822,82.421)
O5': (44.256,179.534,84.430)
O3': (47.690,177.870,86.322)
C2: (53.928,172.520,85.874)
OP1: (51.672,179.780,85.208)
OP2: (50.304,177.624,85.437)
C4: (51.615,172.392,86.016)
O5': (52.777,177.588,84.955)
C3': (55.103,176.034,83.889)
C1': (55.076,174.720,85.835)
O4': (54.763,176.060,86.196)
C5': (54.118,178.089,85.047)
P: (51.577,178.372,85.643)
O2: (55.047,171.988,85.806)
C4': (55.099,176.948,85.097)
C2': (55.724,174.767,84.453)
O2': (57.124,174.876,84.599)
N1: (53.835,173.920,85.863)
N3: (52.798,171.786,85.955)
N4: (50.533,171.632,86.129)
C6: (52.610,174.526,85.896)
C5: (51.488,173.807,85.973)
O3': (55.892,176.581,82.859)
OP1: (51.672,179.780,85.208)
OP2: (50.304,177.624,85.437)
C4: (51.615,172.392,86.016)
O5': (52.777,177.588,84.955)
C3': (55.103,176.034,83.889)
C1': (55.076,174.720,85.835)
O4': (54.763,176.060,86.196)
C5': (54.118,178.089,85.047)
P: (51.577,178.372,85.643)
O2: (55.047,171.988,85.806)
C4': (55.099,176.948,85.097)
C2': (55.724,174.767,84.453)
O2': (57.124,174.876,84.599)
N1: (53.835,173.920,85.863)
N3: (52.798,171.786,85.955)
N4: (50.533,171.632,86.129)
C6: (52.610,174.526,85.896)
C5: (51.488,173.807,85.973)
O3': (55.892,176.581,82.859)
Image (generated by PyMOL):