ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2090:A2103

Extra

PDB:
ATOM 1 O3' C A2089 118.943 116.868 29.967 1.00 78.45 O
ATOM 2 P A A2090 118.474 118.204 30.717 1.00 77.12 P
ATOM 3 OP1 A A2090 118.603 119.328 29.748 1.00 76.78 O
ATOM 4 OP2 A A2090 119.208 118.253 32.008 1.00 76.29 O
ATOM 5 O5' A A2090 116.921 117.958 30.986 1.00 75.32 O
ATOM 6 C5' A A2090 116.028 117.592 29.912 1.00 72.38 C
ATOM 7 C4' A A2090 115.085 116.511 30.376 1.00 70.52 C
ATOM 8 O4' A A2090 115.854 115.344 30.783 1.00 70.23 O
ATOM 9 C3' A A2090 114.294 116.860 31.623 1.00 69.65 C
ATOM 10 O3' A A2090 113.167 117.646 31.303 1.00 68.48 O
ATOM 11 C2' A A2090 113.933 115.489 32.166 1.00 69.21 C
ATOM 12 O2' A A2090 112.889 114.906 31.409 1.00 68.20 O
ATOM 13 C1' A A2090 115.236 114.733 31.912 1.00 69.63 C
ATOM 14 N9 A A2090 116.183 114.760 33.033 1.00 70.11 N
ATOM 15 C8 A A2090 117.502 115.146 32.978 1.00 70.30 C
ATOM 16 N7 A A2090 118.156 114.965 34.101 1.00 70.50 N
ATOM 17 C5 A A2090 117.202 114.444 34.963 1.00 70.52 C
ATOM 18 C6 A A2090 117.278 113.998 36.299 1.00 70.48 C
ATOM 19 N6 A A2090 118.409 113.957 37.006 1.00 70.31 N
ATOM 20 N1 A A2090 116.145 113.568 36.881 1.00 70.40 N
ATOM 21 C2 A A2090 115.022 113.556 36.158 1.00 70.47 C
ATOM 22 N3 A A2090 114.828 113.914 34.883 1.00 70.78 N
ATOM 23 C4 A A2090 115.972 114.353 34.333 1.00 70.36 C
ATOM 24 P C A2091 112.960 119.060 32.033 1.00 67.08 P
ATOM 25 OP1 C A2091 111.618 119.528 31.649 1.00 67.29 O
ATOM 26 OP2 C A2091 114.146 119.914 31.754 1.00 68.11 O
ATOM 27 O5' C A2091 112.917 118.681 33.574 1.00 65.56 O
TER

ATOM 1 O3' G B2102 124.268 115.670 44.363 1.00 87.93 O
ATOM 2 P G B2103 124.362 114.167 43.789 1.00 89.03 P
ATOM 3 OP1 G B2103 123.850 113.233 44.833 1.00 88.55 O
ATOM 4 OP2 G B2103 125.726 113.965 43.231 1.00 89.06 O
ATOM 5 O5' G B2103 123.306 114.123 42.593 1.00 86.84 O
ATOM 6 C5' G B2103 121.902 114.089 42.873 1.00 83.81 C
ATOM 7 C4' G B2103 121.118 113.747 41.636 1.00 81.97 C
ATOM 8 O4' G B2103 121.174 114.817 40.662 1.00 81.71 O
ATOM 9 C3' G B2103 121.583 112.520 40.888 1.00 80.71 C
ATOM 10 O3' G B2103 121.055 111.354 41.497 1.00 79.90 O
ATOM 11 C2' G B2103 120.982 112.747 39.512 1.00 81.78 C
ATOM 12 O2' G B2103 119.604 112.438 39.476 1.00 82.06 O
ATOM 13 C1' G B2103 121.144 114.263 39.360 1.00 82.11 C
ATOM 14 N9 G B2103 122.372 114.654 38.675 1.00 82.83 N
ATOM 15 C8 G B2103 123.621 114.775 39.235 1.00 83.49 C
ATOM 16 N7 G B2103 124.527 115.172 38.386 1.00 84.50 N
ATOM 17 C5 G B2103 123.838 115.316 37.188 1.00 84.10 C
ATOM 18 C6 G B2103 124.300 115.726 35.915 1.00 84.47 C
ATOM 19 O6 G B2103 125.443 116.062 35.592 1.00 85.82 O
ATOM 20 N1 G B2103 123.278 115.726 34.970 1.00 83.11 N
ATOM 21 C2 G B2103 121.978 115.380 35.222 1.00 81.88 C
ATOM 22 N2 G B2103 121.150 115.448 34.181 1.00 81.45 N
ATOM 23 N3 G B2103 121.528 114.998 36.410 1.00 82.15 N
ATOM 24 C4 G B2103 122.509 114.991 37.343 1.00 83.08 C
ATOM 25 P A B2104 121.818 109.957 41.324 1.00 79.97 P
ATOM 26 OP1 A B2104 121.320 108.993 42.346 1.00 79.25 O
ATOM 27 OP2 A B2104 123.265 110.272 41.252 1.00 81.89 O
ATOM 28 O5' A B2104 121.386 109.443 39.884 1.00 78.28 O
TER

Atoms:
OP1: (118.603,119.328,29.748)
OP2: (119.208,118.253,32.008)
C3': (114.294,116.860,31.623)
C1': (115.236,114.733,31.912)
C5': (116.028,117.592,29.912)
O4': (115.854,115.344,30.783)
C8: (117.502,115.146,32.978)
O2': (112.889,114.906,31.409)
C6: (117.278,113.998,36.299)
C5: (117.202,114.444,34.963)
C4: (115.972,114.353,34.333)
P: (118.474,118.204,30.717)
C4': (115.085,116.511,30.376)
C2': (113.933,115.489,32.166)
C2: (115.022,113.556,36.158)
N1: (116.145,113.568,36.881)
N3: (114.828,113.914,34.883)
N6: (118.409,113.957,37.006)
N7: (118.156,114.965,34.101)
N9: (116.183,114.760,33.033)
O5': (116.921,117.958,30.986)
O3': (113.167,117.646,31.303)
OP1: (123.850,113.233,44.833)
OP2: (125.726,113.965,43.231)
C3': (121.583,112.520,40.888)
C1': (121.144,114.263,39.360)
C5': (121.902,114.089,42.873)
O6: (125.443,116.062,35.592)
O4': (121.174,114.817,40.662)
C8: (123.621,114.775,39.235)
C2: (121.978,115.380,35.222)
C6: (124.300,115.726,35.915)
C5: (123.838,115.316,37.188)
C4: (122.509,114.991,37.343)
P: (124.362,114.167,43.789)
C4': (121.118,113.747,41.636)
C2': (120.982,112.747,39.512)
O2': (119.604,112.438,39.476)
N1: (123.278,115.726,34.970)
N2: (121.150,115.448,34.181)
N3: (121.528,114.998,36.410)
N7: (124.527,115.172,38.386)
N9: (122.372,114.654,38.675)
O5': (123.306,114.123,42.593)
O3': (121.055,111.354,41.497)
Image (generated by PyMOL):
PyMOL image
show in jmol