Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1984:A1988
Extra
PDB:
ATOM 1 O3' U A1983 -18.826 89.070 158.441 1.00 0.01 O
ATOM 2 P G A1984 -19.995 88.830 159.509 1.00 0.01 P
ATOM 3 OP1 G A1984 -19.405 88.136 160.660 1.00 0.01 O
ATOM 4 OP2 G A1984 -21.109 88.198 158.802 1.00 0.01 O
ATOM 5 O5' G A1984 -20.387 90.302 159.919 1.00 0.01 O
ATOM 6 C5' G A1984 -21.169 91.125 159.064 1.00 0.01 C
ATOM 7 C4' G A1984 -22.110 91.968 159.863 1.00 0.01 C
ATOM 8 O4' G A1984 -23.029 91.086 160.549 1.00 0.01 O
ATOM 9 C3' G A1984 -21.448 92.814 160.930 1.00 0.01 C
ATOM 10 O3' G A1984 -22.173 94.020 161.095 1.00 0.01 O
ATOM 11 C2' G A1984 -21.558 91.944 162.182 1.00 0.01 C
ATOM 12 O2' G A1984 -21.608 92.649 163.403 1.00 0.01 O
ATOM 13 C1' G A1984 -22.842 91.156 161.941 1.00 0.01 C
ATOM 14 N9 G A1984 -22.781 89.784 162.435 1.00 0.01 N
ATOM 15 C8 G A1984 -21.701 88.942 162.388 1.00 0.01 C
ATOM 16 N7 G A1984 -21.948 87.781 162.909 1.00 0.01 N
ATOM 17 C5 G A1984 -23.267 87.869 163.315 1.00 0.01 C
ATOM 18 C6 G A1984 -24.091 86.921 163.929 1.00 0.01 C
ATOM 19 O6 G A1984 -23.788 85.778 164.238 1.00 0.01 O
ATOM 20 N1 G A1984 -25.359 87.415 164.167 1.00 0.01 N
ATOM 21 C2 G A1984 -25.769 88.673 163.850 1.00 0.01 C
ATOM 22 N2 G A1984 -27.024 88.997 164.140 1.00 0.01 N
ATOM 23 N3 G A1984 -25.024 89.577 163.272 1.00 0.01 N
ATOM 24 C4 G A1984 -23.796 89.097 163.033 1.00 0.01 C
ATOM 25 P U A1985 -22.084 95.184 159.983 1.00 0.48 P
ATOM 26 OP1 U A1985 -21.170 94.721 158.920 1.00 0.48 O
ATOM 27 OP2 U A1985 -21.749 96.424 160.694 1.00 0.48 O
ATOM 28 O5' U A1985 -23.587 95.255 159.422 1.00 0.48 O
TER
ATOM 1 O3' U B1987 -34.921 87.202 162.546 1.00 4.39 O
ATOM 2 P C B1988 -35.017 86.826 164.120 1.00 7.46 P
ATOM 3 OP1 C B1988 -34.764 85.363 164.247 1.00 7.46 O
ATOM 4 OP2 C B1988 -36.302 87.379 164.625 1.00 7.46 O
ATOM 5 O5' C B1988 -33.809 87.621 164.753 1.00 7.46 O
ATOM 6 C5' C B1988 -33.830 88.044 166.104 1.00 7.46 C
ATOM 7 C4' C B1988 -32.433 88.283 166.603 1.00 7.46 C
ATOM 8 O4' C B1988 -31.675 87.049 166.461 1.00 7.46 O
ATOM 9 C3' C B1988 -31.638 89.328 165.830 1.00 7.46 C
ATOM 10 O3' C B1988 -30.649 89.885 166.691 1.00 7.46 O
ATOM 11 C2' C B1988 -30.941 88.469 164.789 1.00 7.46 C
ATOM 12 O2' C B1988 -29.829 89.072 164.171 1.00 7.46 O
ATOM 13 C1' C B1988 -30.543 87.295 165.664 1.00 7.46 C
ATOM 14 N1 C B1988 -30.217 86.073 164.951 1.00 7.40 N
ATOM 15 C2 C B1988 -28.875 85.692 164.892 1.00 7.40 C
ATOM 16 O2 C B1988 -28.004 86.405 165.397 1.00 7.40 O
ATOM 17 N3 C B1988 -28.555 84.541 164.270 1.00 7.40 N
ATOM 18 C4 C B1988 -29.529 83.806 163.720 1.00 7.40 C
ATOM 19 N4 C B1988 -29.140 82.688 163.105 1.00 7.40 N
ATOM 20 C5 C B1988 -30.916 84.183 163.783 1.00 7.40 C
ATOM 21 C6 C B1988 -31.215 85.316 164.423 1.00 7.40 C
ATOM 22 P C B1989 -30.931 91.232 167.509 1.00 0.18 P
ATOM 23 OP1 C B1989 -32.388 91.254 167.797 1.00 0.18 O
ATOM 24 OP2 C B1989 -30.319 92.364 166.726 1.00 0.18 O
ATOM 25 O5' C B1989 -30.089 91.006 168.852 1.00 0.18 O
TER
ATOM 2 P G A1984 -19.995 88.830 159.509 1.00 0.01 P
ATOM 3 OP1 G A1984 -19.405 88.136 160.660 1.00 0.01 O
ATOM 4 OP2 G A1984 -21.109 88.198 158.802 1.00 0.01 O
ATOM 5 O5' G A1984 -20.387 90.302 159.919 1.00 0.01 O
ATOM 6 C5' G A1984 -21.169 91.125 159.064 1.00 0.01 C
ATOM 7 C4' G A1984 -22.110 91.968 159.863 1.00 0.01 C
ATOM 8 O4' G A1984 -23.029 91.086 160.549 1.00 0.01 O
ATOM 9 C3' G A1984 -21.448 92.814 160.930 1.00 0.01 C
ATOM 10 O3' G A1984 -22.173 94.020 161.095 1.00 0.01 O
ATOM 11 C2' G A1984 -21.558 91.944 162.182 1.00 0.01 C
ATOM 12 O2' G A1984 -21.608 92.649 163.403 1.00 0.01 O
ATOM 13 C1' G A1984 -22.842 91.156 161.941 1.00 0.01 C
ATOM 14 N9 G A1984 -22.781 89.784 162.435 1.00 0.01 N
ATOM 15 C8 G A1984 -21.701 88.942 162.388 1.00 0.01 C
ATOM 16 N7 G A1984 -21.948 87.781 162.909 1.00 0.01 N
ATOM 17 C5 G A1984 -23.267 87.869 163.315 1.00 0.01 C
ATOM 18 C6 G A1984 -24.091 86.921 163.929 1.00 0.01 C
ATOM 19 O6 G A1984 -23.788 85.778 164.238 1.00 0.01 O
ATOM 20 N1 G A1984 -25.359 87.415 164.167 1.00 0.01 N
ATOM 21 C2 G A1984 -25.769 88.673 163.850 1.00 0.01 C
ATOM 22 N2 G A1984 -27.024 88.997 164.140 1.00 0.01 N
ATOM 23 N3 G A1984 -25.024 89.577 163.272 1.00 0.01 N
ATOM 24 C4 G A1984 -23.796 89.097 163.033 1.00 0.01 C
ATOM 25 P U A1985 -22.084 95.184 159.983 1.00 0.48 P
ATOM 26 OP1 U A1985 -21.170 94.721 158.920 1.00 0.48 O
ATOM 27 OP2 U A1985 -21.749 96.424 160.694 1.00 0.48 O
ATOM 28 O5' U A1985 -23.587 95.255 159.422 1.00 0.48 O
TER
ATOM 1 O3' U B1987 -34.921 87.202 162.546 1.00 4.39 O
ATOM 2 P C B1988 -35.017 86.826 164.120 1.00 7.46 P
ATOM 3 OP1 C B1988 -34.764 85.363 164.247 1.00 7.46 O
ATOM 4 OP2 C B1988 -36.302 87.379 164.625 1.00 7.46 O
ATOM 5 O5' C B1988 -33.809 87.621 164.753 1.00 7.46 O
ATOM 6 C5' C B1988 -33.830 88.044 166.104 1.00 7.46 C
ATOM 7 C4' C B1988 -32.433 88.283 166.603 1.00 7.46 C
ATOM 8 O4' C B1988 -31.675 87.049 166.461 1.00 7.46 O
ATOM 9 C3' C B1988 -31.638 89.328 165.830 1.00 7.46 C
ATOM 10 O3' C B1988 -30.649 89.885 166.691 1.00 7.46 O
ATOM 11 C2' C B1988 -30.941 88.469 164.789 1.00 7.46 C
ATOM 12 O2' C B1988 -29.829 89.072 164.171 1.00 7.46 O
ATOM 13 C1' C B1988 -30.543 87.295 165.664 1.00 7.46 C
ATOM 14 N1 C B1988 -30.217 86.073 164.951 1.00 7.40 N
ATOM 15 C2 C B1988 -28.875 85.692 164.892 1.00 7.40 C
ATOM 16 O2 C B1988 -28.004 86.405 165.397 1.00 7.40 O
ATOM 17 N3 C B1988 -28.555 84.541 164.270 1.00 7.40 N
ATOM 18 C4 C B1988 -29.529 83.806 163.720 1.00 7.40 C
ATOM 19 N4 C B1988 -29.140 82.688 163.105 1.00 7.40 N
ATOM 20 C5 C B1988 -30.916 84.183 163.783 1.00 7.40 C
ATOM 21 C6 C B1988 -31.215 85.316 164.423 1.00 7.40 C
ATOM 22 P C B1989 -30.931 91.232 167.509 1.00 0.18 P
ATOM 23 OP1 C B1989 -32.388 91.254 167.797 1.00 0.18 O
ATOM 24 OP2 C B1989 -30.319 92.364 166.726 1.00 0.18 O
ATOM 25 O5' C B1989 -30.089 91.006 168.852 1.00 0.18 O
TER
Atoms:
OP1: (-19.405,88.136,160.660)
OP2: (-21.109,88.198,158.802)
C3': (-21.448,92.814,160.930)
C1': (-22.842,91.156,161.941)
C5': (-21.169,91.125,159.064)
O6: (-23.788,85.778,164.238)
O4': (-23.029,91.086,160.549)
C8: (-21.701,88.942,162.388)
C2: (-25.769,88.673,163.850)
C6: (-24.091,86.921,163.929)
C5: (-23.267,87.869,163.315)
C4: (-23.796,89.097,163.033)
P: (-19.995,88.830,159.509)
C4': (-22.110,91.968,159.863)
C2': (-21.558,91.944,162.182)
O2': (-21.608,92.649,163.403)
N1: (-25.359,87.415,164.167)
N2: (-27.024,88.997,164.140)
N3: (-25.024,89.577,163.272)
N7: (-21.948,87.781,162.909)
N9: (-22.781,89.784,162.435)
O5': (-20.387,90.302,159.919)
O3': (-22.173,94.020,161.095)
OP2: (-21.109,88.198,158.802)
C3': (-21.448,92.814,160.930)
C1': (-22.842,91.156,161.941)
C5': (-21.169,91.125,159.064)
O6: (-23.788,85.778,164.238)
O4': (-23.029,91.086,160.549)
C8: (-21.701,88.942,162.388)
C2: (-25.769,88.673,163.850)
C6: (-24.091,86.921,163.929)
C5: (-23.267,87.869,163.315)
C4: (-23.796,89.097,163.033)
P: (-19.995,88.830,159.509)
C4': (-22.110,91.968,159.863)
C2': (-21.558,91.944,162.182)
O2': (-21.608,92.649,163.403)
N1: (-25.359,87.415,164.167)
N2: (-27.024,88.997,164.140)
N3: (-25.024,89.577,163.272)
N7: (-21.948,87.781,162.909)
N9: (-22.781,89.784,162.435)
O5': (-20.387,90.302,159.919)
O3': (-22.173,94.020,161.095)
C2: (-28.875,85.692,164.892)
OP1: (-34.764,85.363,164.247)
OP2: (-36.302,87.379,164.625)
C4: (-29.529,83.806,163.720)
O5': (-33.809,87.621,164.753)
C3': (-31.638,89.328,165.830)
C1': (-30.543,87.295,165.664)
O4': (-31.675,87.049,166.461)
C5': (-33.830,88.044,166.104)
P: (-35.017,86.826,164.120)
O2: (-28.004,86.405,165.397)
C4': (-32.433,88.283,166.603)
C2': (-30.941,88.469,164.789)
O2': (-29.829,89.072,164.171)
N1: (-30.217,86.073,164.951)
N3: (-28.555,84.541,164.270)
N4: (-29.140,82.688,163.105)
C6: (-31.215,85.316,164.423)
C5: (-30.916,84.183,163.783)
O3': (-30.649,89.885,166.691)
OP1: (-34.764,85.363,164.247)
OP2: (-36.302,87.379,164.625)
C4: (-29.529,83.806,163.720)
O5': (-33.809,87.621,164.753)
C3': (-31.638,89.328,165.830)
C1': (-30.543,87.295,165.664)
O4': (-31.675,87.049,166.461)
C5': (-33.830,88.044,166.104)
P: (-35.017,86.826,164.120)
O2: (-28.004,86.405,165.397)
C4': (-32.433,88.283,166.603)
C2': (-30.941,88.469,164.789)
O2': (-29.829,89.072,164.171)
N1: (-30.217,86.073,164.951)
N3: (-28.555,84.541,164.270)
N4: (-29.140,82.688,163.105)
C6: (-31.215,85.316,164.423)
C5: (-30.916,84.183,163.783)
O3': (-30.649,89.885,166.691)
Image (generated by PyMOL):