Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G78:A58:A46
Extra
PDB:
ATOM 1 O3' U A 57 -8.108 106.972 105.126 1.00 2.00 O
ATOM 2 P A A 58 -6.615 107.346 105.515 1.00 2.00 P
ATOM 3 OP1 A A 58 -6.072 108.214 104.458 1.00 2.00 O
ATOM 4 OP2 A A 58 -5.908 106.115 105.899 1.00 2.00 O
ATOM 5 O5' A A 58 -6.794 108.206 106.844 1.00 2.00 O
ATOM 6 C5' A A 58 -7.604 109.364 106.852 1.00 2.00 C
ATOM 7 C4' A A 58 -7.498 110.070 108.191 1.00 2.00 C
ATOM 8 O4' A A 58 -8.408 109.445 109.122 1.00 2.00 O
ATOM 9 C3' A A 58 -6.143 109.969 108.853 1.00 2.00 C
ATOM 10 O3' A A 58 -5.368 111.037 108.420 1.00 2.00 O
ATOM 11 C2' A A 58 -6.516 110.132 110.316 1.00 2.00 C
ATOM 12 O2' A A 58 -6.811 111.459 110.635 1.00 2.00 O
ATOM 13 C1' A A 58 -7.817 109.358 110.400 1.00 2.00 C
ATOM 14 N9 A A 58 -7.636 107.956 110.783 1.00 2.00 N
ATOM 15 C8 A A 58 -7.344 106.895 109.979 1.00 2.00 C
ATOM 16 N7 A A 58 -7.236 105.764 110.631 1.00 2.00 N
ATOM 17 C5 A A 58 -7.469 106.101 111.949 1.00 2.00 C
ATOM 18 C6 A A 58 -7.509 105.354 113.143 1.00 2.00 C
ATOM 19 N6 A A 58 -7.299 104.035 113.214 1.00 2.00 N
ATOM 20 N1 A A 58 -7.777 106.016 114.284 1.00 2.00 N
ATOM 21 C2 A A 58 -7.994 107.331 114.237 1.00 2.00 C
ATOM 22 N3 A A 58 -7.980 108.128 113.183 1.00 2.00 N
ATOM 23 C4 A A 58 -7.714 107.447 112.061 1.00 2.00 C
ATOM 24 P A A 59 -3.772 110.997 108.424 1.00 2.00 P
ATOM 25 OP1 A A 59 -3.267 112.381 108.309 1.00 2.00 O
ATOM 26 OP2 A A 59 -3.351 110.005 107.419 1.00 2.00 O
ATOM 27 O5' A A 59 -3.382 110.523 109.896 1.00 2.00 O
TER
ATOM 1 O3' U B 45 -5.189 95.975 116.530 1.00 2.00 O
ATOM 2 P G B 46 -6.788 95.959 116.433 1.00 2.00 P
ATOM 3 OP1 G B 46 -7.303 95.681 117.794 1.00 2.00 O
ATOM 4 OP2 G B 46 -7.186 95.162 115.260 1.00 2.00 O
ATOM 5 O5' G B 46 -7.190 97.454 116.052 1.00 2.00 O
ATOM 6 C5' G B 46 -7.261 98.522 117.007 1.00 2.00 C
ATOM 7 C4' G B 46 -7.591 99.798 116.264 1.00 2.00 C
ATOM 8 O4' G B 46 -6.616 99.997 115.214 1.00 2.00 O
ATOM 9 C3' G B 46 -8.893 99.746 115.494 1.00 2.00 C
ATOM 10 O3' G B 46 -10.003 99.946 116.346 1.00 2.00 O
ATOM 11 C2' G B 46 -8.675 100.902 114.531 1.00 2.00 C
ATOM 12 O2' G B 46 -8.815 102.157 115.150 1.00 2.00 O
ATOM 13 C1' G B 46 -7.220 100.688 114.143 1.00 2.00 C
ATOM 14 N9 G B 46 -7.120 99.879 112.941 1.00 2.00 N
ATOM 15 C8 G B 46 -7.019 98.525 112.883 1.00 2.00 C
ATOM 16 N7 G B 46 -6.960 98.067 111.673 1.00 2.00 N
ATOM 17 C5 G B 46 -7.030 99.184 110.871 1.00 2.00 C
ATOM 18 C6 G B 46 -7.009 99.291 109.462 1.00 2.00 C
ATOM 19 O6 G B 46 -6.923 98.377 108.629 1.00 2.00 O
ATOM 20 N1 G B 46 -7.098 100.622 109.045 1.00 2.00 N
ATOM 21 C2 G B 46 -7.197 101.697 109.894 1.00 2.00 C
ATOM 22 N2 G B 46 -7.274 102.896 109.324 1.00 2.00 N
ATOM 23 N3 G B 46 -7.220 101.606 111.215 1.00 2.00 N
ATOM 24 C4 G B 46 -7.130 100.316 111.637 1.00 2.00 C
ATOM 25 P A B 47 -11.428 99.386 115.900 1.00 2.00 P
ATOM 26 OP1 A B 47 -12.043 98.784 117.090 1.00 2.00 O
ATOM 27 OP2 A B 47 -11.283 98.630 114.643 1.00 2.00 O
ATOM 28 O5' A B 47 -12.275 100.667 115.530 1.00 2.00 O
TER
ATOM 2 P A A 58 -6.615 107.346 105.515 1.00 2.00 P
ATOM 3 OP1 A A 58 -6.072 108.214 104.458 1.00 2.00 O
ATOM 4 OP2 A A 58 -5.908 106.115 105.899 1.00 2.00 O
ATOM 5 O5' A A 58 -6.794 108.206 106.844 1.00 2.00 O
ATOM 6 C5' A A 58 -7.604 109.364 106.852 1.00 2.00 C
ATOM 7 C4' A A 58 -7.498 110.070 108.191 1.00 2.00 C
ATOM 8 O4' A A 58 -8.408 109.445 109.122 1.00 2.00 O
ATOM 9 C3' A A 58 -6.143 109.969 108.853 1.00 2.00 C
ATOM 10 O3' A A 58 -5.368 111.037 108.420 1.00 2.00 O
ATOM 11 C2' A A 58 -6.516 110.132 110.316 1.00 2.00 C
ATOM 12 O2' A A 58 -6.811 111.459 110.635 1.00 2.00 O
ATOM 13 C1' A A 58 -7.817 109.358 110.400 1.00 2.00 C
ATOM 14 N9 A A 58 -7.636 107.956 110.783 1.00 2.00 N
ATOM 15 C8 A A 58 -7.344 106.895 109.979 1.00 2.00 C
ATOM 16 N7 A A 58 -7.236 105.764 110.631 1.00 2.00 N
ATOM 17 C5 A A 58 -7.469 106.101 111.949 1.00 2.00 C
ATOM 18 C6 A A 58 -7.509 105.354 113.143 1.00 2.00 C
ATOM 19 N6 A A 58 -7.299 104.035 113.214 1.00 2.00 N
ATOM 20 N1 A A 58 -7.777 106.016 114.284 1.00 2.00 N
ATOM 21 C2 A A 58 -7.994 107.331 114.237 1.00 2.00 C
ATOM 22 N3 A A 58 -7.980 108.128 113.183 1.00 2.00 N
ATOM 23 C4 A A 58 -7.714 107.447 112.061 1.00 2.00 C
ATOM 24 P A A 59 -3.772 110.997 108.424 1.00 2.00 P
ATOM 25 OP1 A A 59 -3.267 112.381 108.309 1.00 2.00 O
ATOM 26 OP2 A A 59 -3.351 110.005 107.419 1.00 2.00 O
ATOM 27 O5' A A 59 -3.382 110.523 109.896 1.00 2.00 O
TER
ATOM 1 O3' U B 45 -5.189 95.975 116.530 1.00 2.00 O
ATOM 2 P G B 46 -6.788 95.959 116.433 1.00 2.00 P
ATOM 3 OP1 G B 46 -7.303 95.681 117.794 1.00 2.00 O
ATOM 4 OP2 G B 46 -7.186 95.162 115.260 1.00 2.00 O
ATOM 5 O5' G B 46 -7.190 97.454 116.052 1.00 2.00 O
ATOM 6 C5' G B 46 -7.261 98.522 117.007 1.00 2.00 C
ATOM 7 C4' G B 46 -7.591 99.798 116.264 1.00 2.00 C
ATOM 8 O4' G B 46 -6.616 99.997 115.214 1.00 2.00 O
ATOM 9 C3' G B 46 -8.893 99.746 115.494 1.00 2.00 C
ATOM 10 O3' G B 46 -10.003 99.946 116.346 1.00 2.00 O
ATOM 11 C2' G B 46 -8.675 100.902 114.531 1.00 2.00 C
ATOM 12 O2' G B 46 -8.815 102.157 115.150 1.00 2.00 O
ATOM 13 C1' G B 46 -7.220 100.688 114.143 1.00 2.00 C
ATOM 14 N9 G B 46 -7.120 99.879 112.941 1.00 2.00 N
ATOM 15 C8 G B 46 -7.019 98.525 112.883 1.00 2.00 C
ATOM 16 N7 G B 46 -6.960 98.067 111.673 1.00 2.00 N
ATOM 17 C5 G B 46 -7.030 99.184 110.871 1.00 2.00 C
ATOM 18 C6 G B 46 -7.009 99.291 109.462 1.00 2.00 C
ATOM 19 O6 G B 46 -6.923 98.377 108.629 1.00 2.00 O
ATOM 20 N1 G B 46 -7.098 100.622 109.045 1.00 2.00 N
ATOM 21 C2 G B 46 -7.197 101.697 109.894 1.00 2.00 C
ATOM 22 N2 G B 46 -7.274 102.896 109.324 1.00 2.00 N
ATOM 23 N3 G B 46 -7.220 101.606 111.215 1.00 2.00 N
ATOM 24 C4 G B 46 -7.130 100.316 111.637 1.00 2.00 C
ATOM 25 P A B 47 -11.428 99.386 115.900 1.00 2.00 P
ATOM 26 OP1 A B 47 -12.043 98.784 117.090 1.00 2.00 O
ATOM 27 OP2 A B 47 -11.283 98.630 114.643 1.00 2.00 O
ATOM 28 O5' A B 47 -12.275 100.667 115.530 1.00 2.00 O
TER
Atoms:
OP1: (-6.072,108.214,104.458)
OP2: (-5.908,106.115,105.899)
C3': (-6.143,109.969,108.853)
C1': (-7.817,109.358,110.400)
C5': (-7.604,109.364,106.852)
O4': (-8.408,109.445,109.122)
C8: (-7.344,106.895,109.979)
O2': (-6.811,111.459,110.635)
C6: (-7.509,105.354,113.143)
C5: (-7.469,106.101,111.949)
C4: (-7.714,107.447,112.061)
P: (-6.615,107.346,105.515)
C4': (-7.498,110.070,108.191)
C2': (-6.516,110.132,110.316)
C2: (-7.994,107.331,114.237)
N1: (-7.777,106.016,114.284)
N3: (-7.980,108.128,113.183)
N6: (-7.299,104.035,113.214)
N7: (-7.236,105.764,110.631)
N9: (-7.636,107.956,110.783)
O5': (-6.794,108.206,106.844)
O3': (-5.368,111.037,108.420)
OP2: (-5.908,106.115,105.899)
C3': (-6.143,109.969,108.853)
C1': (-7.817,109.358,110.400)
C5': (-7.604,109.364,106.852)
O4': (-8.408,109.445,109.122)
C8: (-7.344,106.895,109.979)
O2': (-6.811,111.459,110.635)
C6: (-7.509,105.354,113.143)
C5: (-7.469,106.101,111.949)
C4: (-7.714,107.447,112.061)
P: (-6.615,107.346,105.515)
C4': (-7.498,110.070,108.191)
C2': (-6.516,110.132,110.316)
C2: (-7.994,107.331,114.237)
N1: (-7.777,106.016,114.284)
N3: (-7.980,108.128,113.183)
N6: (-7.299,104.035,113.214)
N7: (-7.236,105.764,110.631)
N9: (-7.636,107.956,110.783)
O5': (-6.794,108.206,106.844)
O3': (-5.368,111.037,108.420)
OP1: (-7.303,95.681,117.794)
OP2: (-7.186,95.162,115.260)
C3': (-8.893,99.746,115.494)
C1': (-7.220,100.688,114.143)
C5': (-7.261,98.522,117.007)
O6: (-6.923,98.377,108.629)
O4': (-6.616,99.997,115.214)
C8: (-7.019,98.525,112.883)
C2: (-7.197,101.697,109.894)
C6: (-7.009,99.291,109.462)
C5: (-7.030,99.184,110.871)
C4: (-7.130,100.316,111.637)
P: (-6.788,95.959,116.433)
C4': (-7.591,99.798,116.264)
C2': (-8.675,100.902,114.531)
O2': (-8.815,102.157,115.150)
N1: (-7.098,100.622,109.045)
N2: (-7.274,102.896,109.324)
N3: (-7.220,101.606,111.215)
N7: (-6.960,98.067,111.673)
N9: (-7.120,99.879,112.941)
O5': (-7.190,97.454,116.052)
O3': (-10.003,99.946,116.346)
OP2: (-7.186,95.162,115.260)
C3': (-8.893,99.746,115.494)
C1': (-7.220,100.688,114.143)
C5': (-7.261,98.522,117.007)
O6: (-6.923,98.377,108.629)
O4': (-6.616,99.997,115.214)
C8: (-7.019,98.525,112.883)
C2: (-7.197,101.697,109.894)
C6: (-7.009,99.291,109.462)
C5: (-7.030,99.184,110.871)
C4: (-7.130,100.316,111.637)
P: (-6.788,95.959,116.433)
C4': (-7.591,99.798,116.264)
C2': (-8.675,100.902,114.531)
O2': (-8.815,102.157,115.150)
N1: (-7.098,100.622,109.045)
N2: (-7.274,102.896,109.324)
N3: (-7.220,101.606,111.215)
N7: (-6.960,98.067,111.673)
N9: (-7.120,99.879,112.941)
O5': (-7.190,97.454,116.052)
O3': (-10.003,99.946,116.346)
Image (generated by PyMOL):