ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F2Q:X39:X41

Extra

PDB:
ATOM 1 O3' U A 38 14.283 51.706 9.969 1.00 62.53 O
ATOM 2 P A A 39 15.061 50.616 10.837 1.00 61.47 P
ATOM 3 OP1 A A 39 15.870 49.848 9.873 1.00 62.16 O
ATOM 4 OP2 A A 39 14.128 49.916 11.756 1.00 60.80 O
ATOM 5 O5' A A 39 16.020 51.512 11.733 1.00 61.89 O
ATOM 6 C5' A A 39 17.242 51.974 11.214 1.00 63.28 C
ATOM 7 C4' A A 39 18.241 52.063 12.346 1.00 64.03 C
ATOM 8 O4' A A 39 17.754 53.022 13.324 1.00 64.59 O
ATOM 9 C3' A A 39 18.426 50.743 13.083 1.00 64.64 C
ATOM 10 O3' A A 39 19.799 50.492 13.367 1.00 65.19 O
ATOM 11 C2' A A 39 17.652 50.944 14.376 1.00 64.92 C
ATOM 12 O2' A A 39 18.262 50.258 15.447 1.00 67.83 O
ATOM 13 C1' A A 39 17.770 52.440 14.605 1.00 64.10 C
ATOM 14 N9 A A 39 16.681 52.963 15.424 1.00 63.71 N
ATOM 15 C8 A A 39 15.359 52.628 15.348 1.00 63.93 C
ATOM 16 N7 A A 39 14.606 53.236 16.232 1.00 63.29 N
ATOM 17 C5 A A 39 15.494 54.025 16.937 1.00 62.80 C
ATOM 18 C6 A A 39 15.325 54.918 18.013 1.00 63.06 C
ATOM 19 N6 A A 39 14.144 55.171 18.582 1.00 63.06 N
ATOM 20 N1 A A 39 16.421 55.547 18.489 1.00 63.23 N
ATOM 21 C2 A A 39 17.603 55.300 17.917 1.00 62.61 C
ATOM 22 N3 A A 39 17.881 54.479 16.905 1.00 63.63 N
ATOM 23 C4 A A 39 16.776 53.863 16.459 1.00 63.20 C
ATOM 24 P G A 40 20.859 50.217 12.206 1.00 64.54 P
ATOM 25 OP1 G A 40 21.562 51.497 11.958 1.00 65.34 O
ATOM 26 OP2 G A 40 20.190 49.506 11.104 1.00 65.90 O
ATOM 27 O5' G A 40 21.848 49.161 12.873 1.00 65.04 O
TER

ATOM 1 O3' G B 40 21.320 49.192 16.690 1.00 64.96 O
ATOM 2 P U B 41 20.842 50.610 17.277 1.00 66.16 P
ATOM 3 OP1 U B 41 19.661 50.359 18.135 1.00 65.53 O
ATOM 4 OP2 U B 41 20.746 51.571 16.153 1.00 65.38 O
ATOM 5 O5' U B 41 22.075 51.065 18.205 1.00 67.62 O
ATOM 6 C5' U B 41 22.005 50.967 19.631 1.00 69.40 C
ATOM 7 C4' U B 41 23.024 51.882 20.279 1.00 70.84 C
ATOM 8 O4' U B 41 24.284 51.687 19.608 1.00 70.97 O
ATOM 9 C3' U B 41 22.716 53.374 20.152 1.00 73.52 C
ATOM 10 O3' U B 41 21.964 53.891 21.274 1.00 75.63 O
ATOM 11 C2' U B 41 24.094 54.013 20.087 1.00 73.70 C
ATOM 12 O2' U B 41 24.571 54.403 21.360 1.00 76.52 O
ATOM 13 C1' U B 41 24.975 52.912 19.492 1.00 71.98 C
ATOM 14 N1 U B 41 25.312 53.196 18.061 1.00 71.17 N
ATOM 15 C2 U B 41 26.420 53.977 17.788 1.00 71.34 C
ATOM 16 O2 U B 41 27.156 54.417 18.653 1.00 71.88 O
ATOM 17 N3 U B 41 26.648 54.221 16.456 1.00 71.22 N
ATOM 18 C4 U B 41 25.884 53.784 15.392 1.00 70.95 C
ATOM 19 O4 U B 41 26.213 54.087 14.252 1.00 71.41 O
ATOM 20 C5 U B 41 24.738 52.985 15.751 1.00 70.78 C
ATOM 21 C6 U B 41 24.496 52.734 17.045 1.00 70.77 C
ATOM 22 P C B 42 21.883 53.116 22.690 1.00 77.50 P
ATOM 23 OP1 C B 42 23.263 52.737 23.106 1.00 76.99 O
ATOM 24 OP2 C B 42 20.848 52.048 22.605 1.00 77.48 O
ATOM 25 O5' C B 42 21.316 54.272 23.660 1.00 73.89 O
TER

Atoms:
OP1: (15.870,49.848,9.873)
OP2: (14.128,49.916,11.756)
C3': (18.426,50.743,13.083)
C1': (17.770,52.440,14.605)
C5': (17.242,51.974,11.214)
O4': (17.754,53.022,13.324)
C8: (15.359,52.628,15.348)
O2': (18.262,50.258,15.447)
C6: (15.325,54.918,18.013)
C5: (15.494,54.025,16.937)
C4: (16.776,53.863,16.459)
P: (15.061,50.616,10.837)
C4': (18.241,52.063,12.346)
C2': (17.652,50.944,14.376)
C2: (17.603,55.300,17.917)
N1: (16.421,55.547,18.489)
N3: (17.881,54.479,16.905)
N6: (14.144,55.171,18.582)
N7: (14.606,53.236,16.232)
N9: (16.681,52.963,15.424)
O5': (16.020,51.512,11.733)
O3': (19.799,50.492,13.367)
C4: (25.884,53.784,15.392)
N3: (26.648,54.221,16.456)
OP1: (19.661,50.359,18.135)
OP2: (20.746,51.571,16.153)
C2: (26.420,53.977,17.788)
C1': (24.975,52.912,19.492)
C3': (22.716,53.374,20.152)
O5': (22.075,51.065,18.205)
O4': (24.284,51.687,19.608)
C5': (22.005,50.967,19.631)
P: (20.842,50.610,17.277)
C4': (23.024,51.882,20.279)
C2': (24.094,54.013,20.087)
O2': (24.571,54.403,21.360)
N1: (25.312,53.196,18.061)
O4: (26.213,54.087,14.252)
O2: (27.156,54.417,18.653)
C6: (24.496,52.734,17.045)
C5: (24.738,52.985,15.751)
O3': (21.964,53.891,21.274)
Image (generated by PyMOL):
PyMOL image
show in jmol