Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1335:A1337
Extra
PDB:
ATOM 1 O3' G A1334 -4.140 -50.609 32.612 1.00 0.01 O
ATOM 2 P A A1335 -4.836 -49.598 33.605 1.00 0.01 P
ATOM 3 OP1 A A1335 -4.157 -49.714 34.904 1.00 0.01 O
ATOM 4 OP2 A A1335 -6.269 -49.873 33.540 1.00 0.01 O
ATOM 5 O5' A A1335 -4.514 -48.202 32.922 1.00 0.01 O
ATOM 6 C5' A A1335 -3.169 -47.777 32.752 1.00 0.01 C
ATOM 7 C4' A A1335 -3.063 -46.301 32.426 1.00 0.01 C
ATOM 8 O4' A A1335 -3.833 -46.027 31.236 1.00 0.01 O
ATOM 9 C3' A A1335 -3.586 -45.326 33.484 1.00 0.01 C
ATOM 10 O3' A A1335 -2.881 -44.092 33.363 1.00 0.01 O
ATOM 11 C2' A A1335 -5.011 -45.093 33.022 1.00 0.01 C
ATOM 12 O2' A A1335 -5.589 -43.896 33.488 1.00 0.01 O
ATOM 13 C1' A A1335 -4.812 -45.054 31.521 1.00 0.01 C
ATOM 14 N9 A A1335 -5.991 -45.384 30.747 1.00 0.01 N
ATOM 15 C8 A A1335 -6.948 -46.346 30.920 1.00 0.01 C
ATOM 16 N7 A A1335 -7.849 -46.356 29.966 1.00 0.01 N
ATOM 17 C5 A A1335 -7.427 -45.355 29.112 1.00 0.01 C
ATOM 18 C6 A A1335 -7.931 -44.852 27.930 1.00 0.01 C
ATOM 19 N6 A A1335 -9.017 -45.275 27.303 1.00 0.01 N
ATOM 20 N1 A A1335 -7.254 -43.872 27.358 1.00 0.01 N
ATOM 21 C2 A A1335 -6.149 -43.415 27.933 1.00 0.01 C
ATOM 22 N3 A A1335 -5.574 -43.781 29.052 1.00 0.01 N
ATOM 23 C4 A A1335 -6.282 -44.768 29.582 1.00 0.01 C
ATOM 24 P G A1336 -1.644 -43.736 34.316 1.00 0.01 P
ATOM 25 OP1 G A1336 -0.479 -43.403 33.418 1.00 0.01 O
ATOM 26 OP2 G A1336 -1.515 -44.856 35.280 1.00 0.01 O
ATOM 27 O5' G A1336 -2.163 -42.419 35.067 1.00 0.01 O
TER
ATOM 1 O3' G B1336 -5.470 -40.043 34.440 1.00 0.01 O
ATOM 2 P U B1337 -5.847 -40.758 33.078 1.00 0.01 P
ATOM 3 OP1 U B1337 -7.271 -41.076 33.151 1.00 0.01 O
ATOM 4 OP2 U B1337 -4.885 -41.846 32.882 1.00 0.01 O
ATOM 5 O5' U B1337 -5.601 -39.614 32.009 1.00 0.01 O
ATOM 6 C5' U B1337 -6.444 -38.469 31.975 1.00 0.01 C
ATOM 7 C4' U B1337 -5.837 -37.355 31.164 1.00 0.01 C
ATOM 8 O4' U B1337 -4.666 -36.864 31.844 1.00 0.01 O
ATOM 9 C3' U B1337 -5.312 -37.734 29.784 1.00 0.01 C
ATOM 10 O3' U B1337 -6.316 -37.889 28.766 1.00 0.01 O
ATOM 11 C2' U B1337 -4.282 -36.655 29.517 1.00 0.01 C
ATOM 12 O2' U B1337 -4.893 -35.423 29.170 1.00 0.01 O
ATOM 13 C1' U B1337 -3.681 -36.493 30.900 1.00 0.01 C
ATOM 14 N1 U B1337 -2.488 -37.337 31.082 1.00 0.20 N
ATOM 15 C2 U B1337 -1.261 -36.795 30.710 1.00 0.20 C
ATOM 16 O2 U B1337 -1.104 -35.694 30.243 1.00 0.20 O
ATOM 17 N3 U B1337 -0.165 -37.564 30.864 1.00 0.20 N
ATOM 18 C4 U B1337 -0.151 -38.827 31.369 1.00 0.20 C
ATOM 19 O4 U B1337 0.950 -39.416 31.456 1.00 0.20 O
ATOM 20 C5 U B1337 -1.465 -39.331 31.737 1.00 0.20 C
ATOM 21 C6 U B1337 -2.570 -38.595 31.578 1.00 0.20 C
ATOM 22 P C B1338 -7.451 -36.754 28.430 1.00 1.01 P
ATOM 23 OP1 C B1338 -6.859 -35.841 27.379 1.00 1.01 O
ATOM 24 OP2 C B1338 -7.970 -36.169 29.725 1.00 1.01 O
ATOM 25 O5' C B1338 -8.603 -37.606 27.766 1.00 1.01 O
TER
ATOM 2 P A A1335 -4.836 -49.598 33.605 1.00 0.01 P
ATOM 3 OP1 A A1335 -4.157 -49.714 34.904 1.00 0.01 O
ATOM 4 OP2 A A1335 -6.269 -49.873 33.540 1.00 0.01 O
ATOM 5 O5' A A1335 -4.514 -48.202 32.922 1.00 0.01 O
ATOM 6 C5' A A1335 -3.169 -47.777 32.752 1.00 0.01 C
ATOM 7 C4' A A1335 -3.063 -46.301 32.426 1.00 0.01 C
ATOM 8 O4' A A1335 -3.833 -46.027 31.236 1.00 0.01 O
ATOM 9 C3' A A1335 -3.586 -45.326 33.484 1.00 0.01 C
ATOM 10 O3' A A1335 -2.881 -44.092 33.363 1.00 0.01 O
ATOM 11 C2' A A1335 -5.011 -45.093 33.022 1.00 0.01 C
ATOM 12 O2' A A1335 -5.589 -43.896 33.488 1.00 0.01 O
ATOM 13 C1' A A1335 -4.812 -45.054 31.521 1.00 0.01 C
ATOM 14 N9 A A1335 -5.991 -45.384 30.747 1.00 0.01 N
ATOM 15 C8 A A1335 -6.948 -46.346 30.920 1.00 0.01 C
ATOM 16 N7 A A1335 -7.849 -46.356 29.966 1.00 0.01 N
ATOM 17 C5 A A1335 -7.427 -45.355 29.112 1.00 0.01 C
ATOM 18 C6 A A1335 -7.931 -44.852 27.930 1.00 0.01 C
ATOM 19 N6 A A1335 -9.017 -45.275 27.303 1.00 0.01 N
ATOM 20 N1 A A1335 -7.254 -43.872 27.358 1.00 0.01 N
ATOM 21 C2 A A1335 -6.149 -43.415 27.933 1.00 0.01 C
ATOM 22 N3 A A1335 -5.574 -43.781 29.052 1.00 0.01 N
ATOM 23 C4 A A1335 -6.282 -44.768 29.582 1.00 0.01 C
ATOM 24 P G A1336 -1.644 -43.736 34.316 1.00 0.01 P
ATOM 25 OP1 G A1336 -0.479 -43.403 33.418 1.00 0.01 O
ATOM 26 OP2 G A1336 -1.515 -44.856 35.280 1.00 0.01 O
ATOM 27 O5' G A1336 -2.163 -42.419 35.067 1.00 0.01 O
TER
ATOM 1 O3' G B1336 -5.470 -40.043 34.440 1.00 0.01 O
ATOM 2 P U B1337 -5.847 -40.758 33.078 1.00 0.01 P
ATOM 3 OP1 U B1337 -7.271 -41.076 33.151 1.00 0.01 O
ATOM 4 OP2 U B1337 -4.885 -41.846 32.882 1.00 0.01 O
ATOM 5 O5' U B1337 -5.601 -39.614 32.009 1.00 0.01 O
ATOM 6 C5' U B1337 -6.444 -38.469 31.975 1.00 0.01 C
ATOM 7 C4' U B1337 -5.837 -37.355 31.164 1.00 0.01 C
ATOM 8 O4' U B1337 -4.666 -36.864 31.844 1.00 0.01 O
ATOM 9 C3' U B1337 -5.312 -37.734 29.784 1.00 0.01 C
ATOM 10 O3' U B1337 -6.316 -37.889 28.766 1.00 0.01 O
ATOM 11 C2' U B1337 -4.282 -36.655 29.517 1.00 0.01 C
ATOM 12 O2' U B1337 -4.893 -35.423 29.170 1.00 0.01 O
ATOM 13 C1' U B1337 -3.681 -36.493 30.900 1.00 0.01 C
ATOM 14 N1 U B1337 -2.488 -37.337 31.082 1.00 0.20 N
ATOM 15 C2 U B1337 -1.261 -36.795 30.710 1.00 0.20 C
ATOM 16 O2 U B1337 -1.104 -35.694 30.243 1.00 0.20 O
ATOM 17 N3 U B1337 -0.165 -37.564 30.864 1.00 0.20 N
ATOM 18 C4 U B1337 -0.151 -38.827 31.369 1.00 0.20 C
ATOM 19 O4 U B1337 0.950 -39.416 31.456 1.00 0.20 O
ATOM 20 C5 U B1337 -1.465 -39.331 31.737 1.00 0.20 C
ATOM 21 C6 U B1337 -2.570 -38.595 31.578 1.00 0.20 C
ATOM 22 P C B1338 -7.451 -36.754 28.430 1.00 1.01 P
ATOM 23 OP1 C B1338 -6.859 -35.841 27.379 1.00 1.01 O
ATOM 24 OP2 C B1338 -7.970 -36.169 29.725 1.00 1.01 O
ATOM 25 O5' C B1338 -8.603 -37.606 27.766 1.00 1.01 O
TER
Atoms:
OP1: (-4.157,-49.714,34.904)
OP2: (-6.269,-49.873,33.540)
C3': (-3.586,-45.326,33.484)
C1': (-4.812,-45.054,31.521)
C5': (-3.169,-47.777,32.752)
O4': (-3.833,-46.027,31.236)
C8: (-6.948,-46.346,30.920)
O2': (-5.589,-43.896,33.488)
C6: (-7.931,-44.852,27.930)
C5: (-7.427,-45.355,29.112)
C4: (-6.282,-44.768,29.582)
P: (-4.836,-49.598,33.605)
C4': (-3.063,-46.301,32.426)
C2': (-5.011,-45.093,33.022)
C2: (-6.149,-43.415,27.933)
N1: (-7.254,-43.872,27.358)
N3: (-5.574,-43.781,29.052)
N6: (-9.017,-45.275,27.303)
N7: (-7.849,-46.356,29.966)
N9: (-5.991,-45.384,30.747)
O5': (-4.514,-48.202,32.922)
O3': (-2.881,-44.092,33.363)
OP2: (-6.269,-49.873,33.540)
C3': (-3.586,-45.326,33.484)
C1': (-4.812,-45.054,31.521)
C5': (-3.169,-47.777,32.752)
O4': (-3.833,-46.027,31.236)
C8: (-6.948,-46.346,30.920)
O2': (-5.589,-43.896,33.488)
C6: (-7.931,-44.852,27.930)
C5: (-7.427,-45.355,29.112)
C4: (-6.282,-44.768,29.582)
P: (-4.836,-49.598,33.605)
C4': (-3.063,-46.301,32.426)
C2': (-5.011,-45.093,33.022)
C2: (-6.149,-43.415,27.933)
N1: (-7.254,-43.872,27.358)
N3: (-5.574,-43.781,29.052)
N6: (-9.017,-45.275,27.303)
N7: (-7.849,-46.356,29.966)
N9: (-5.991,-45.384,30.747)
O5': (-4.514,-48.202,32.922)
O3': (-2.881,-44.092,33.363)
C4: (-0.151,-38.827,31.369)
N3: (-0.165,-37.564,30.864)
OP1: (-7.271,-41.076,33.151)
OP2: (-4.885,-41.846,32.882)
C2: (-1.261,-36.795,30.710)
C1': (-3.681,-36.493,30.900)
C3': (-5.312,-37.734,29.784)
O5': (-5.601,-39.614,32.009)
O4': (-4.666,-36.864,31.844)
C5': (-6.444,-38.469,31.975)
P: (-5.847,-40.758,33.078)
C4': (-5.837,-37.355,31.164)
C2': (-4.282,-36.655,29.517)
O2': (-4.893,-35.423,29.170)
N1: (-2.488,-37.337,31.082)
O4: (0.950,-39.416,31.456)
O2: (-1.104,-35.694,30.243)
C6: (-2.570,-38.595,31.578)
C5: (-1.465,-39.331,31.737)
O3': (-6.316,-37.889,28.766)
N3: (-0.165,-37.564,30.864)
OP1: (-7.271,-41.076,33.151)
OP2: (-4.885,-41.846,32.882)
C2: (-1.261,-36.795,30.710)
C1': (-3.681,-36.493,30.900)
C3': (-5.312,-37.734,29.784)
O5': (-5.601,-39.614,32.009)
O4': (-4.666,-36.864,31.844)
C5': (-6.444,-38.469,31.975)
P: (-5.847,-40.758,33.078)
C4': (-5.837,-37.355,31.164)
C2': (-4.282,-36.655,29.517)
O2': (-4.893,-35.423,29.170)
N1: (-2.488,-37.337,31.082)
O4: (0.950,-39.416,31.456)
O2: (-1.104,-35.694,30.243)
C6: (-2.570,-38.595,31.578)
C5: (-1.465,-39.331,31.737)
O3': (-6.316,-37.889,28.766)
Image (generated by PyMOL):