ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:B2:B3

Extra

PDB:
ATOM 1 O3' A A 1 -27.733 -44.526 52.981 1.00191.77 O
ATOM 2 P A A 2 -28.941 -43.474 52.823 1.00190.73 P
ATOM 3 OP1 A A 2 -29.338 -43.429 51.393 1.00190.36 O
ATOM 4 OP2 A A 2 -28.535 -42.221 53.511 1.00190.66 O
ATOM 5 O5' A A 2 -30.143 -44.131 53.635 1.00190.21 O
ATOM 6 C5' A A 2 -31.271 -43.355 54.033 1.00188.91 C
ATOM 7 C4' A A 2 -32.144 -43.077 52.839 1.00188.12 C
ATOM 8 O4' A A 2 -32.422 -44.333 52.164 1.00187.82 O
ATOM 9 C3' A A 2 -33.519 -42.488 53.122 1.00187.80 C
ATOM 10 O3' A A 2 -33.494 -41.071 53.304 1.00187.30 O
ATOM 11 C2' A A 2 -34.287 -42.903 51.874 1.00187.95 C
ATOM 12 O2' A A 2 -33.976 -42.100 50.752 1.00188.21 O
ATOM 13 C1' A A 2 -33.739 -44.311 51.643 1.00187.66 C
ATOM 14 N9 A A 2 -34.538 -45.303 52.360 1.00186.70 N
ATOM 15 C8 A A 2 -34.112 -46.325 53.172 1.00186.51 C
ATOM 16 N7 A A 2 -35.089 -47.035 53.680 1.00185.85 N
ATOM 17 C5 A A 2 -36.238 -46.442 53.165 1.00185.85 C
ATOM 18 C6 A A 2 -37.610 -46.726 53.322 1.00185.54 C
ATOM 19 N6 A A 2 -38.079 -47.726 54.073 1.00185.66 N
ATOM 20 N1 A A 2 -38.493 -45.938 52.670 1.00185.00 N
ATOM 21 C2 A A 2 -38.026 -44.942 51.918 1.00184.65 C
ATOM 22 N3 A A 2 -36.769 -44.577 51.691 1.00185.21 N
ATOM 23 C4 A A 2 -35.912 -45.376 52.352 1.00185.94 C
ATOM 24 P U A 3 -34.857 -40.278 53.674 1.00186.77 P
ATOM 25 OP1 U A 3 -35.859 -40.483 52.591 1.00187.05 O
ATOM 26 OP2 U A 3 -34.494 -38.893 54.080 1.00187.09 O
ATOM 27 O5' U A 3 -35.422 -41.010 54.969 1.00184.72 O
TER

ATOM 1 O3' A B 2 -33.494 -41.071 53.304 1.00187.30 O
ATOM 2 P U B 3 -34.857 -40.278 53.674 1.00186.77 P
ATOM 3 OP1 U B 3 -35.859 -40.483 52.591 1.00187.05 O
ATOM 4 OP2 U B 3 -34.494 -38.893 54.080 1.00187.09 O
ATOM 5 O5' U B 3 -35.422 -41.010 54.969 1.00184.72 O
ATOM 6 C5' U B 3 -36.806 -41.324 55.056 1.00182.01 C
ATOM 7 C4' U B 3 -37.565 -40.195 55.715 1.00179.85 C
ATOM 8 O4' U B 3 -37.124 -38.929 55.159 1.00179.80 O
ATOM 9 C3' U B 3 -39.067 -40.212 55.466 1.00177.98 C
ATOM 10 O3' U B 3 -39.732 -41.043 56.412 1.00174.96 O
ATOM 11 C2' U B 3 -39.440 -38.748 55.669 1.00178.84 C
ATOM 12 O2' U B 3 -39.584 -38.403 57.032 1.00178.46 O
ATOM 13 C1' U B 3 -38.220 -38.033 55.083 1.00179.84 C
ATOM 14 N1 U B 3 -38.384 -37.618 53.683 1.00181.32 N
ATOM 15 C2 U B 3 -39.011 -36.410 53.443 1.00182.33 C
ATOM 16 O2 U B 3 -39.428 -35.692 54.337 1.00183.48 O
ATOM 17 N3 U B 3 -39.132 -36.073 52.118 1.00183.26 N
ATOM 18 C4 U B 3 -38.699 -36.805 51.032 1.00183.36 C
ATOM 19 O4 U B 3 -38.879 -36.367 49.895 1.00184.50 O
ATOM 20 C5 U B 3 -38.062 -38.043 51.363 1.00182.68 C
ATOM 21 C6 U B 3 -37.931 -38.398 52.646 1.00181.93 C
ATOM 22 P U B 4 -39.690 -42.641 56.241 1.00172.69 P
ATOM 23 OP1 U B 4 -39.269 -43.206 57.559 1.00172.03 O
ATOM 24 OP2 U B 4 -38.896 -42.950 55.014 1.00171.78 O
ATOM 25 O5' U B 4 -41.205 -43.067 55.971 1.00169.65 O
TER

Atoms:
OP1: (-29.338,-43.429,51.393)
OP2: (-28.535,-42.221,53.511)
C3': (-33.519,-42.488,53.122)
C1': (-33.739,-44.311,51.643)
C5': (-31.271,-43.355,54.033)
O4': (-32.422,-44.333,52.164)
C8: (-34.112,-46.325,53.172)
O2': (-33.976,-42.100,50.752)
C6: (-37.610,-46.726,53.322)
C5: (-36.238,-46.442,53.165)
C4: (-35.912,-45.376,52.352)
P: (-28.941,-43.474,52.823)
C4': (-32.144,-43.077,52.839)
C2': (-34.287,-42.903,51.874)
C2: (-38.026,-44.942,51.918)
N1: (-38.493,-45.938,52.670)
N3: (-36.769,-44.577,51.691)
N6: (-38.079,-47.726,54.073)
N7: (-35.089,-47.035,53.680)
N9: (-34.538,-45.303,52.360)
O5': (-30.143,-44.131,53.635)
O3': (-33.494,-41.071,53.304)
C4: (-38.699,-36.805,51.032)
N3: (-39.132,-36.073,52.118)
OP1: (-35.859,-40.483,52.591)
OP2: (-34.494,-38.893,54.080)
C2: (-39.011,-36.410,53.443)
C1': (-38.220,-38.033,55.083)
C3': (-39.067,-40.212,55.466)
O5': (-35.422,-41.010,54.969)
O4': (-37.124,-38.929,55.159)
C5': (-36.806,-41.324,55.056)
P: (-34.857,-40.278,53.674)
C4': (-37.565,-40.195,55.715)
C2': (-39.440,-38.748,55.669)
O2': (-39.584,-38.403,57.032)
N1: (-38.384,-37.618,53.683)
O4: (-38.879,-36.367,49.895)
O2: (-39.428,-35.692,54.337)
C6: (-37.931,-38.398,52.646)
C5: (-38.062,-38.043,51.363)
O3': (-39.732,-41.043,56.412)
Image (generated by PyMOL):
PyMOL image
show in jmol