ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:A2:A3

Extra

PDB:
ATOM 1 O3' A A 1 -18.690 -43.094 91.156 1.00196.17 O
ATOM 2 P A A 2 -17.818 -41.746 91.299 1.00195.87 P
ATOM 3 OP1 A A 2 -17.477 -41.563 92.737 1.00195.35 O
ATOM 4 OP2 A A 2 -18.530 -40.662 90.571 1.00196.31 O
ATOM 5 O5' A A 2 -16.471 -42.073 90.507 1.00195.20 O
ATOM 6 C5' A A 2 -15.580 -41.033 90.098 1.00194.20 C
ATOM 7 C4' A A 2 -14.820 -40.506 91.292 1.00193.18 C
ATOM 8 O4' A A 2 -14.221 -41.628 91.999 1.00192.84 O
ATOM 9 C3' A A 2 -13.649 -39.576 91.005 1.00192.58 C
ATOM 10 O3' A A 2 -14.050 -38.222 90.796 1.00191.98 O
ATOM 11 C2' A A 2 -12.811 -39.743 92.265 1.00192.58 C
ATOM 12 O2' A A 2 -13.341 -39.027 93.363 1.00192.71 O
ATOM 13 C1' A A 2 -12.965 -41.241 92.529 1.00192.36 C
ATOM 14 N9 A A 2 -11.923 -42.007 91.851 1.00191.51 N
ATOM 15 C8 A A 2 -12.049 -43.128 91.070 1.00191.27 C
ATOM 16 N7 A A 2 -10.912 -43.558 90.580 1.00190.94 N
ATOM 17 C5 A A 2 -9.973 -42.663 91.078 1.00190.85 C
ATOM 18 C6 A A 2 -8.577 -42.566 90.924 1.00190.39 C
ATOM 19 N6 A A 2 -7.849 -43.414 90.194 1.00190.19 N
ATOM 20 N1 A A 2 -7.945 -41.552 91.554 1.00190.10 N
ATOM 21 C2 A A 2 -8.670 -40.703 92.285 1.00190.32 C
ATOM 22 N3 A A 2 -9.980 -40.690 92.506 1.00190.85 N
ATOM 23 C4 A A 2 -10.581 -41.708 91.866 1.00191.07 C
ATOM 24 P U A 3 -12.945 -37.103 90.411 1.00191.30 P
ATOM 25 OP1 U A 3 -11.943 -37.008 91.506 1.00191.02 O
ATOM 26 OP2 U A 3 -13.652 -35.874 89.961 1.00190.90 O
ATOM 27 O5' U A 3 -12.192 -37.684 89.135 1.00189.78 O
TER

ATOM 1 O3' A B 2 -14.050 -38.222 90.796 1.00191.98 O
ATOM 2 P U B 3 -12.945 -37.103 90.411 1.00191.30 P
ATOM 3 OP1 U B 3 -11.943 -37.008 91.506 1.00191.02 O
ATOM 4 OP2 U B 3 -13.652 -35.874 89.961 1.00190.90 O
ATOM 5 O5' U B 3 -12.192 -37.684 89.135 1.00189.78 O
ATOM 6 C5' U B 3 -10.774 -37.616 89.059 1.00187.57 C
ATOM 7 C4' U B 3 -10.340 -36.338 88.378 1.00186.03 C
ATOM 8 O4' U B 3 -11.113 -35.226 88.901 1.00185.60 O
ATOM 9 C3' U B 3 -8.893 -35.945 88.637 1.00184.97 C
ATOM 10 O3' U B 3 -8.018 -36.584 87.716 1.00183.90 O
ATOM 11 C2' U B 3 -8.924 -34.439 88.403 1.00185.08 C
ATOM 12 O2' U B 3 -8.860 -34.097 87.033 1.00184.81 O
ATOM 13 C1' U B 3 -10.298 -34.067 88.963 1.00185.27 C
ATOM 14 N1 U B 3 -10.268 -33.593 90.354 1.00185.08 N
ATOM 15 C2 U B 3 -9.990 -32.257 90.570 1.00185.36 C
ATOM 16 O2 U B 3 -9.770 -31.473 89.663 1.00185.92 O
ATOM 17 N3 U B 3 -9.981 -31.873 91.888 1.00185.33 N
ATOM 18 C4 U B 3 -10.215 -32.672 92.988 1.00184.99 C
ATOM 19 O4 U B 3 -10.173 -32.178 94.116 1.00185.77 O
ATOM 20 C5 U B 3 -10.492 -34.042 92.681 1.00184.66 C
ATOM 21 C6 U B 3 -10.508 -34.445 91.406 1.00184.91 C
ATOM 22 P U B 4 -7.637 -38.131 87.921 1.00183.36 P
ATOM 23 OP1 U B 4 -7.884 -38.805 86.617 1.00183.04 O
ATOM 24 OP2 U B 4 -8.323 -38.622 89.150 1.00183.19 O
ATOM 25 O5' U B 4 -6.066 -38.135 88.211 1.00181.71 O
TER

Atoms:
OP1: (-17.477,-41.563,92.737)
OP2: (-18.530,-40.662,90.571)
C3': (-13.649,-39.576,91.005)
C1': (-12.965,-41.241,92.529)
C5': (-15.580,-41.033,90.098)
O4': (-14.221,-41.628,91.999)
C8: (-12.049,-43.128,91.070)
O2': (-13.341,-39.027,93.363)
C6: (-8.577,-42.566,90.924)
C5: (-9.973,-42.663,91.078)
C4: (-10.581,-41.708,91.866)
P: (-17.818,-41.746,91.299)
C4': (-14.820,-40.506,91.292)
C2': (-12.811,-39.743,92.265)
C2: (-8.670,-40.703,92.285)
N1: (-7.945,-41.552,91.554)
N3: (-9.980,-40.690,92.506)
N6: (-7.849,-43.414,90.194)
N7: (-10.912,-43.558,90.580)
N9: (-11.923,-42.007,91.851)
O5': (-16.471,-42.073,90.507)
O3': (-14.050,-38.222,90.796)
C4: (-10.215,-32.672,92.988)
N3: (-9.981,-31.873,91.888)
OP1: (-11.943,-37.008,91.506)
OP2: (-13.652,-35.874,89.961)
C2: (-9.990,-32.257,90.570)
C1': (-10.298,-34.067,88.963)
C3': (-8.893,-35.945,88.637)
O5': (-12.192,-37.684,89.135)
O4': (-11.113,-35.226,88.901)
C5': (-10.774,-37.616,89.059)
P: (-12.945,-37.103,90.411)
C4': (-10.340,-36.338,88.378)
C2': (-8.924,-34.439,88.403)
O2': (-8.860,-34.097,87.033)
N1: (-10.268,-33.593,90.354)
O4: (-10.173,-32.178,94.116)
O2: (-9.770,-31.473,89.663)
C6: (-10.508,-34.445,91.406)
C5: (-10.492,-34.042,92.681)
O3': (-8.018,-36.584,87.716)
Image (generated by PyMOL):
PyMOL image
show in jmol