ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:21139:21141

Extra

PDB:
ATOM 1 O3' C A1138 -80.083 -42.352 83.350 1.00100.19 O
ATOM 2 P A A1139 -79.879 -43.829 83.943 1.00 94.35 P
ATOM 3 OP1 A A1139 -81.203 -44.297 84.426 1.00 95.17 O
ATOM 4 OP2 A A1139 -78.748 -43.780 84.903 1.00 94.15 O
ATOM 5 O5' A A1139 -79.455 -44.636 82.657 1.00 94.05 O
ATOM 6 C5' A A1139 -79.219 -43.956 81.439 1.00 93.44 C
ATOM 7 C4' A A1139 -78.186 -44.656 80.600 1.00 93.00 C
ATOM 8 O4' A A1139 -77.195 -43.691 80.118 1.00 92.23 O
ATOM 9 C3' A A1139 -77.306 -45.662 81.305 1.00 93.13 C
ATOM 10 O3' A A1139 -77.952 -46.852 81.774 1.00 93.86 O
ATOM 11 C2' A A1139 -76.201 -45.816 80.276 1.00 92.50 C
ATOM 12 O2' A A1139 -76.708 -46.349 79.064 1.00 92.53 O
ATOM 13 C1' A A1139 -75.924 -44.333 80.044 1.00 91.92 C
ATOM 14 N9 A A1139 -75.039 -43.806 81.119 1.00 91.72 N
ATOM 15 C8 A A1139 -75.317 -43.650 82.457 1.00 92.13 C
ATOM 16 N7 A A1139 -74.317 -43.261 83.195 1.00 91.86 N
ATOM 17 C5 A A1139 -73.289 -43.189 82.299 1.00 91.24 C
ATOM 18 C6 A A1139 -71.969 -42.831 82.497 1.00 90.74 C
ATOM 19 N6 A A1139 -71.506 -42.480 83.693 1.00 90.82 N
ATOM 20 N1 A A1139 -71.157 -42.838 81.440 1.00 90.21 N
ATOM 21 C2 A A1139 -71.699 -43.195 80.277 1.00 90.19 C
ATOM 22 N3 A A1139 -72.932 -43.560 79.961 1.00 90.62 N
ATOM 23 C4 A A1139 -73.695 -43.532 81.039 1.00 91.15 C
ATOM 24 P C A1140 -78.151 -48.135 80.862 1.00 88.88 P
ATOM 25 OP1 C A1140 -78.681 -47.666 79.570 1.00 88.60 O
ATOM 26 OP2 C A1140 -78.947 -49.096 81.648 1.00 89.70 O
ATOM 27 O5' C A1140 -76.683 -48.701 80.667 1.00 88.44 O
TER

ATOM 1 O3' C B1140 -73.462 -48.837 77.477 1.00 86.53 O
ATOM 2 P C B1141 -73.856 -47.539 76.611 1.00 93.02 P
ATOM 3 OP1 C B1141 -73.979 -46.403 77.559 1.00 92.96 O
ATOM 4 OP2 C B1141 -75.025 -47.894 75.794 1.00 93.34 O
ATOM 5 O5' C B1141 -72.590 -47.341 75.675 1.00 92.33 O
ATOM 6 C5' C B1141 -71.850 -48.459 75.215 1.00 92.31 C
ATOM 7 C4' C B1141 -71.010 -48.107 74.017 1.00 91.68 C
ATOM 8 O4' C B1141 -71.869 -47.673 72.943 1.00 91.61 O
ATOM 9 C3' C B1141 -70.036 -46.959 74.206 1.00 91.10 C
ATOM 10 O3' C B1141 -68.825 -47.374 74.801 1.00 90.98 O
ATOM 11 C2' C B1141 -69.864 -46.430 72.793 1.00 90.61 C
ATOM 12 O2' C B1141 -68.967 -47.250 72.064 1.00 90.43 O
ATOM 13 C1' C B1141 -71.266 -46.628 72.227 1.00 90.99 C
ATOM 14 N1 C B1141 -72.104 -45.422 72.377 1.00 90.97 N
ATOM 15 C2 C B1141 -72.041 -44.450 71.380 1.00 90.53 C
ATOM 16 O2 C B1141 -71.274 -44.648 70.418 1.00 90.16 O
ATOM 17 N3 C B1141 -72.811 -43.329 71.501 1.00 90.53 N
ATOM 18 C4 C B1141 -73.614 -43.151 72.559 1.00 90.94 C
ATOM 19 N4 C B1141 -74.337 -42.026 72.626 1.00 90.94 N
ATOM 20 C5 C B1141 -73.710 -44.139 73.583 1.00 91.41 C
ATOM 21 C6 C B1141 -72.947 -45.241 73.449 1.00 91.41 C
ATOM 22 P A B1142 -67.951 -46.347 75.651 1.00 78.55 P
ATOM 23 OP1 A B1142 -68.593 -45.025 75.528 1.00 78.33 O
ATOM 24 OP2 A B1142 -66.540 -46.526 75.199 1.00 78.11 O
ATOM 25 O5' A B1142 -68.098 -46.887 77.132 1.00 79.08 O
TER

Atoms:
OP1: (-81.203,-44.297,84.426)
OP2: (-78.748,-43.780,84.903)
C3': (-77.306,-45.662,81.305)
C1': (-75.924,-44.333,80.044)
C5': (-79.219,-43.956,81.439)
O4': (-77.195,-43.691,80.118)
C8: (-75.317,-43.650,82.457)
O2': (-76.708,-46.349,79.064)
C6: (-71.969,-42.831,82.497)
C5: (-73.289,-43.189,82.299)
C4: (-73.695,-43.532,81.039)
P: (-79.879,-43.829,83.943)
C4': (-78.186,-44.656,80.600)
C2': (-76.201,-45.816,80.276)
C2: (-71.699,-43.195,80.277)
N1: (-71.157,-42.838,81.440)
N3: (-72.932,-43.560,79.961)
N6: (-71.506,-42.480,83.693)
N7: (-74.317,-43.261,83.195)
N9: (-75.039,-43.806,81.119)
O5': (-79.455,-44.636,82.657)
O3': (-77.952,-46.852,81.774)
C2: (-72.041,-44.450,71.380)
OP1: (-73.979,-46.403,77.559)
OP2: (-75.025,-47.894,75.794)
C4: (-73.614,-43.151,72.559)
O5': (-72.590,-47.341,75.675)
C3': (-70.036,-46.959,74.206)
C1': (-71.266,-46.628,72.227)
O4': (-71.869,-47.673,72.943)
C5': (-71.850,-48.459,75.215)
P: (-73.856,-47.539,76.611)
O2: (-71.274,-44.648,70.418)
C4': (-71.010,-48.107,74.017)
C2': (-69.864,-46.430,72.793)
O2': (-68.967,-47.250,72.064)
N1: (-72.104,-45.422,72.377)
N3: (-72.811,-43.329,71.501)
N4: (-74.337,-42.026,72.626)
C6: (-72.947,-45.241,73.449)
C5: (-73.710,-44.139,73.583)
O3': (-68.825,-47.374,74.801)
Image (generated by PyMOL):
PyMOL image
show in jmol