Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A504:A499
Extra
PDB:
ATOM 1 O3' A A 503 -40.167-107.481 26.509 1.00 27.93 O
ATOM 2 P A A 504 -39.424-106.755 27.718 1.00 0.01 P
ATOM 3 OP1 A A 504 -38.113-107.439 27.857 1.00 0.01 O
ATOM 4 OP2 A A 504 -40.367-106.755 28.882 1.00 0.01 O
ATOM 5 O5' A A 504 -39.207-105.261 27.187 1.00 0.01 O
ATOM 6 C5' A A 504 -37.920-104.659 27.205 1.00 0.01 C
ATOM 7 C4' A A 504 -37.796-103.633 28.302 1.00 0.01 C
ATOM 8 O4' A A 504 -37.697-104.293 29.572 1.00 0.01 O
ATOM 9 C3' A A 504 -36.559-102.747 28.248 1.00 0.01 C
ATOM 10 O3' A A 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 11 C2' A A 504 -36.361-102.346 29.700 1.00 0.01 C
ATOM 12 O2' A A 504 -37.220-101.283 30.040 1.00 0.01 O
ATOM 13 C1' A A 504 -36.833-103.578 30.431 1.00 0.01 C
ATOM 14 N9 A A 504 -35.728-104.467 30.845 1.00 0.01 N
ATOM 15 C8 A A 504 -35.621-105.776 30.484 1.00 0.01 C
ATOM 16 N7 A A 504 -34.614-106.399 31.019 1.00 0.01 N
ATOM 17 C5 A A 504 -33.998-105.459 31.798 1.00 0.01 C
ATOM 18 C6 A A 504 -32.870-105.539 32.606 1.00 0.01 C
ATOM 19 N6 A A 504 -32.138-106.633 32.764 1.00 0.01 N
ATOM 20 N1 A A 504 -32.510-104.439 33.259 1.00 0.01 N
ATOM 21 C2 A A 504 -33.237-103.344 33.096 1.00 0.01 C
ATOM 22 N3 A A 504 -34.326-103.147 32.363 1.00 0.01 N
ATOM 23 C4 A A 504 -34.672-104.263 31.715 1.00 0.01 C
ATOM 24 P G A 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 25 OP1 G A 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 26 OP2 G A 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 27 O5' G A 505 -34.511-101.122 26.483 1.00 0.01 O
TER
ATOM 1 O3' U B 498 -25.178-110.658 34.244 1.00 0.01 O
ATOM 2 P G B 499 -25.912-111.976 34.700 1.00 0.01 P
ATOM 3 OP1 G B 499 -25.373-112.349 36.035 1.00 0.01 O
ATOM 4 OP2 G B 499 -25.774-112.923 33.573 1.00 0.01 O
ATOM 5 O5' G B 499 -27.427-111.510 34.836 1.00 0.01 O
ATOM 6 C5' G B 499 -27.811-110.471 35.724 1.00 0.01 C
ATOM 7 C4' G B 499 -29.192-109.980 35.396 1.00 0.01 C
ATOM 8 O4' G B 499 -29.170-109.332 34.106 1.00 0.01 O
ATOM 9 C3' G B 499 -30.240-111.055 35.226 1.00 0.01 C
ATOM 10 O3' G B 499 -30.770-111.492 36.446 1.00 0.01 O
ATOM 11 C2' G B 499 -31.263-110.394 34.335 1.00 0.01 C
ATOM 12 O2' G B 499 -32.099-109.553 35.086 1.00 0.01 O
ATOM 13 C1' G B 499 -30.389-109.536 33.441 1.00 0.01 C
ATOM 14 N9 G B 499 -30.125-110.196 32.168 1.00 0.01 N
ATOM 15 C8 G B 499 -29.152-111.109 31.884 1.00 0.01 C
ATOM 16 N7 G B 499 -29.215-111.548 30.647 1.00 0.01 N
ATOM 17 C5 G B 499 -30.300-110.898 30.121 1.00 0.01 C
ATOM 18 C6 G B 499 -30.839-110.982 28.855 1.00 0.01 C
ATOM 19 O6 G B 499 -30.434-111.685 27.931 1.00 0.01 O
ATOM 20 N1 G B 499 -31.935-110.151 28.724 1.00 0.01 N
ATOM 21 C2 G B 499 -32.444-109.355 29.700 1.00 0.01 C
ATOM 22 N2 G B 499 -33.516-108.632 29.405 1.00 0.01 N
ATOM 23 N3 G B 499 -31.948-109.267 30.898 1.00 0.01 N
ATOM 24 C4 G B 499 -30.879-110.061 31.032 1.00 0.01 C
ATOM 25 P A B 500 -30.972-113.045 36.697 1.00 0.01 P
ATOM 26 OP1 A B 500 -31.278-113.223 38.117 1.00 0.01 O
ATOM 27 OP2 A B 500 -29.799-113.727 36.129 1.00 0.01 O
ATOM 28 O5' A B 500 -32.244-113.357 35.832 1.00 0.01 O
TER
ATOM 2 P A A 504 -39.424-106.755 27.718 1.00 0.01 P
ATOM 3 OP1 A A 504 -38.113-107.439 27.857 1.00 0.01 O
ATOM 4 OP2 A A 504 -40.367-106.755 28.882 1.00 0.01 O
ATOM 5 O5' A A 504 -39.207-105.261 27.187 1.00 0.01 O
ATOM 6 C5' A A 504 -37.920-104.659 27.205 1.00 0.01 C
ATOM 7 C4' A A 504 -37.796-103.633 28.302 1.00 0.01 C
ATOM 8 O4' A A 504 -37.697-104.293 29.572 1.00 0.01 O
ATOM 9 C3' A A 504 -36.559-102.747 28.248 1.00 0.01 C
ATOM 10 O3' A A 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 11 C2' A A 504 -36.361-102.346 29.700 1.00 0.01 C
ATOM 12 O2' A A 504 -37.220-101.283 30.040 1.00 0.01 O
ATOM 13 C1' A A 504 -36.833-103.578 30.431 1.00 0.01 C
ATOM 14 N9 A A 504 -35.728-104.467 30.845 1.00 0.01 N
ATOM 15 C8 A A 504 -35.621-105.776 30.484 1.00 0.01 C
ATOM 16 N7 A A 504 -34.614-106.399 31.019 1.00 0.01 N
ATOM 17 C5 A A 504 -33.998-105.459 31.798 1.00 0.01 C
ATOM 18 C6 A A 504 -32.870-105.539 32.606 1.00 0.01 C
ATOM 19 N6 A A 504 -32.138-106.633 32.764 1.00 0.01 N
ATOM 20 N1 A A 504 -32.510-104.439 33.259 1.00 0.01 N
ATOM 21 C2 A A 504 -33.237-103.344 33.096 1.00 0.01 C
ATOM 22 N3 A A 504 -34.326-103.147 32.363 1.00 0.01 N
ATOM 23 C4 A A 504 -34.672-104.263 31.715 1.00 0.01 C
ATOM 24 P G A 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 25 OP1 G A 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 26 OP2 G A 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 27 O5' G A 505 -34.511-101.122 26.483 1.00 0.01 O
TER
ATOM 1 O3' U B 498 -25.178-110.658 34.244 1.00 0.01 O
ATOM 2 P G B 499 -25.912-111.976 34.700 1.00 0.01 P
ATOM 3 OP1 G B 499 -25.373-112.349 36.035 1.00 0.01 O
ATOM 4 OP2 G B 499 -25.774-112.923 33.573 1.00 0.01 O
ATOM 5 O5' G B 499 -27.427-111.510 34.836 1.00 0.01 O
ATOM 6 C5' G B 499 -27.811-110.471 35.724 1.00 0.01 C
ATOM 7 C4' G B 499 -29.192-109.980 35.396 1.00 0.01 C
ATOM 8 O4' G B 499 -29.170-109.332 34.106 1.00 0.01 O
ATOM 9 C3' G B 499 -30.240-111.055 35.226 1.00 0.01 C
ATOM 10 O3' G B 499 -30.770-111.492 36.446 1.00 0.01 O
ATOM 11 C2' G B 499 -31.263-110.394 34.335 1.00 0.01 C
ATOM 12 O2' G B 499 -32.099-109.553 35.086 1.00 0.01 O
ATOM 13 C1' G B 499 -30.389-109.536 33.441 1.00 0.01 C
ATOM 14 N9 G B 499 -30.125-110.196 32.168 1.00 0.01 N
ATOM 15 C8 G B 499 -29.152-111.109 31.884 1.00 0.01 C
ATOM 16 N7 G B 499 -29.215-111.548 30.647 1.00 0.01 N
ATOM 17 C5 G B 499 -30.300-110.898 30.121 1.00 0.01 C
ATOM 18 C6 G B 499 -30.839-110.982 28.855 1.00 0.01 C
ATOM 19 O6 G B 499 -30.434-111.685 27.931 1.00 0.01 O
ATOM 20 N1 G B 499 -31.935-110.151 28.724 1.00 0.01 N
ATOM 21 C2 G B 499 -32.444-109.355 29.700 1.00 0.01 C
ATOM 22 N2 G B 499 -33.516-108.632 29.405 1.00 0.01 N
ATOM 23 N3 G B 499 -31.948-109.267 30.898 1.00 0.01 N
ATOM 24 C4 G B 499 -30.879-110.061 31.032 1.00 0.01 C
ATOM 25 P A B 500 -30.972-113.045 36.697 1.00 0.01 P
ATOM 26 OP1 A B 500 -31.278-113.223 38.117 1.00 0.01 O
ATOM 27 OP2 A B 500 -29.799-113.727 36.129 1.00 0.01 O
ATOM 28 O5' A B 500 -32.244-113.357 35.832 1.00 0.01 O
TER
Atoms:
OP1: (-38.113,-107.439,27.857)
OP2: (-40.367,-106.755,28.882)
C3': (-36.559,-102.747,28.248)
C1': (-36.833,-103.578,30.431)
C5': (-37.920,-104.659,27.205)
O4': (-37.697,-104.293,29.572)
C8: (-35.621,-105.776,30.484)
O2': (-37.220,-101.283,30.040)
C6: (-32.870,-105.539,32.606)
C5: (-33.998,-105.459,31.798)
C4: (-34.672,-104.263,31.715)
P: (-39.424,-106.755,27.718)
C4': (-37.796,-103.633,28.302)
C2': (-36.361,-102.346,29.700)
C2: (-33.237,-103.344,33.096)
N1: (-32.510,-104.439,33.259)
N3: (-34.326,-103.147,32.363)
N6: (-32.138,-106.633,32.764)
N7: (-34.614,-106.399,31.019)
N9: (-35.728,-104.467,30.845)
O5': (-39.207,-105.261,27.187)
O3': (-36.730,-101.639,27.395)
OP2: (-40.367,-106.755,28.882)
C3': (-36.559,-102.747,28.248)
C1': (-36.833,-103.578,30.431)
C5': (-37.920,-104.659,27.205)
O4': (-37.697,-104.293,29.572)
C8: (-35.621,-105.776,30.484)
O2': (-37.220,-101.283,30.040)
C6: (-32.870,-105.539,32.606)
C5: (-33.998,-105.459,31.798)
C4: (-34.672,-104.263,31.715)
P: (-39.424,-106.755,27.718)
C4': (-37.796,-103.633,28.302)
C2': (-36.361,-102.346,29.700)
C2: (-33.237,-103.344,33.096)
N1: (-32.510,-104.439,33.259)
N3: (-34.326,-103.147,32.363)
N6: (-32.138,-106.633,32.764)
N7: (-34.614,-106.399,31.019)
N9: (-35.728,-104.467,30.845)
O5': (-39.207,-105.261,27.187)
O3': (-36.730,-101.639,27.395)
OP1: (-25.373,-112.349,36.035)
OP2: (-25.774,-112.923,33.573)
C3': (-30.240,-111.055,35.226)
C1': (-30.389,-109.536,33.441)
C5': (-27.811,-110.471,35.724)
O6: (-30.434,-111.685,27.931)
O4': (-29.170,-109.332,34.106)
C8: (-29.152,-111.109,31.884)
C2: (-32.444,-109.355,29.700)
C6: (-30.839,-110.982,28.855)
C5: (-30.300,-110.898,30.121)
C4: (-30.879,-110.061,31.032)
P: (-25.912,-111.976,34.700)
C4': (-29.192,-109.980,35.396)
C2': (-31.263,-110.394,34.335)
O2': (-32.099,-109.553,35.086)
N1: (-31.935,-110.151,28.724)
N2: (-33.516,-108.632,29.405)
N3: (-31.948,-109.267,30.898)
N7: (-29.215,-111.548,30.647)
N9: (-30.125,-110.196,32.168)
O5': (-27.427,-111.510,34.836)
O3': (-30.770,-111.492,36.446)
OP2: (-25.774,-112.923,33.573)
C3': (-30.240,-111.055,35.226)
C1': (-30.389,-109.536,33.441)
C5': (-27.811,-110.471,35.724)
O6: (-30.434,-111.685,27.931)
O4': (-29.170,-109.332,34.106)
C8: (-29.152,-111.109,31.884)
C2: (-32.444,-109.355,29.700)
C6: (-30.839,-110.982,28.855)
C5: (-30.300,-110.898,30.121)
C4: (-30.879,-110.061,31.032)
P: (-25.912,-111.976,34.700)
C4': (-29.192,-109.980,35.396)
C2': (-31.263,-110.394,34.335)
O2': (-32.099,-109.553,35.086)
N1: (-31.935,-110.151,28.724)
N2: (-33.516,-108.632,29.405)
N3: (-31.948,-109.267,30.898)
N7: (-29.215,-111.548,30.647)
N9: (-30.125,-110.196,32.168)
O5': (-27.427,-111.510,34.836)
O3': (-30.770,-111.492,36.446)
Image (generated by PyMOL):