Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1880:A1848
Extra
PDB:
ATOM 1 O3' U A1879 -95.543 -8.897 60.330 1.00 23.24 O
ATOM 2 P C A1880 -94.845 -8.828 58.899 1.00 21.79 P
ATOM 3 OP1 C A1880 -94.948 -7.424 58.437 1.00 21.79 O
ATOM 4 OP2 C A1880 -95.449 -9.897 58.063 1.00 21.79 O
ATOM 5 O5' C A1880 -93.333 -9.177 59.241 1.00 21.79 O
ATOM 6 C5' C A1880 -92.565 -8.291 60.025 1.00 21.79 C
ATOM 7 C4' C A1880 -91.274 -8.909 60.473 1.00 21.79 C
ATOM 8 O4' C A1880 -91.521 -10.171 61.130 1.00 21.79 O
ATOM 9 C3' C A1880 -90.293 -9.268 59.387 1.00 21.79 C
ATOM 10 O3' C A1880 -89.614 -8.153 58.875 1.00 21.79 O
ATOM 11 C2' C A1880 -89.387 -10.281 60.080 1.00 21.79 C
ATOM 12 O2' C A1880 -88.396 -9.635 60.867 1.00 21.79 O
ATOM 13 C1' C A1880 -90.369 -10.987 61.012 1.00 21.79 C
ATOM 14 N1 C A1880 -90.767 -12.289 60.499 1.00 22.29 N
ATOM 15 C2 C A1880 -89.978 -13.400 60.793 1.00 22.29 C
ATOM 16 O2 C A1880 -88.945 -13.231 61.475 1.00 22.29 O
ATOM 17 N3 C A1880 -90.378 -14.615 60.318 1.00 22.29 N
ATOM 18 C4 C A1880 -91.495 -14.714 59.590 1.00 22.29 C
ATOM 19 N4 C A1880 -91.882 -15.893 59.113 1.00 22.29 N
ATOM 20 C5 C A1880 -92.295 -13.588 59.295 1.00 22.29 C
ATOM 21 C6 C A1880 -91.900 -12.405 59.767 1.00 22.29 C
ATOM 22 P G A1881 -89.848 -7.737 57.353 1.00 21.41 P
ATOM 23 OP1 G A1881 -89.377 -6.343 57.201 1.00 21.41 O
ATOM 24 OP2 G A1881 -91.262 -8.059 57.030 1.00 21.41 O
ATOM 25 O5' G A1881 -88.873 -8.718 56.566 1.00 21.41 O
TER
ATOM 1 O3' A B1847 -85.213 -23.225 59.869 1.00 0.92 O
ATOM 2 P U B1848 -86.316 -23.215 61.013 1.00 8.48 P
ATOM 3 OP1 U B1848 -86.194 -24.475 61.756 1.00 8.48 O
ATOM 4 OP2 U B1848 -87.593 -22.908 60.367 1.00 8.48 O
ATOM 5 O5' U B1848 -85.859 -21.995 61.924 1.00 8.48 O
ATOM 6 C5' U B1848 -84.574 -21.429 61.773 1.00 8.48 C
ATOM 7 C4' U B1848 -84.505 -20.067 62.389 1.00 8.48 C
ATOM 8 O4' U B1848 -84.770 -19.049 61.389 1.00 8.48 O
ATOM 9 C3' U B1848 -85.511 -19.815 63.492 1.00 8.48 C
ATOM 10 O3' U B1848 -85.042 -20.271 64.750 1.00 8.48 O
ATOM 11 C2' U B1848 -85.731 -18.307 63.425 1.00 8.48 C
ATOM 12 O2' U B1848 -84.702 -17.614 64.119 1.00 8.48 O
ATOM 13 C1' U B1848 -85.584 -18.034 61.928 1.00 8.48 C
ATOM 14 N1 U B1848 -86.871 -18.079 61.222 1.00 9.09 N
ATOM 15 C2 U B1848 -87.557 -16.955 60.836 1.00 9.09 C
ATOM 16 O2 U B1848 -87.191 -15.828 61.089 1.00 9.09 O
ATOM 17 N3 U B1848 -88.717 -17.197 60.140 1.00 9.09 N
ATOM 18 C4 U B1848 -89.250 -18.429 59.778 1.00 9.09 C
ATOM 19 O4 U B1848 -90.316 -18.559 59.136 1.00 9.09 O
ATOM 20 C5 U B1848 -88.457 -19.527 60.212 1.00 9.09 C
ATOM 21 C6 U B1848 -87.329 -19.312 60.885 1.00 9.09 C
ATOM 22 P U B1849 -86.065 -20.535 65.951 1.00 19.43 P
ATOM 23 OP1 U B1849 -85.251 -20.761 67.167 1.00 19.43 O
ATOM 24 OP2 U B1849 -87.023 -21.599 65.512 1.00 19.43 O
ATOM 25 O5' U B1849 -86.837 -19.149 66.049 1.00 19.43 O
TER
ATOM 2 P C A1880 -94.845 -8.828 58.899 1.00 21.79 P
ATOM 3 OP1 C A1880 -94.948 -7.424 58.437 1.00 21.79 O
ATOM 4 OP2 C A1880 -95.449 -9.897 58.063 1.00 21.79 O
ATOM 5 O5' C A1880 -93.333 -9.177 59.241 1.00 21.79 O
ATOM 6 C5' C A1880 -92.565 -8.291 60.025 1.00 21.79 C
ATOM 7 C4' C A1880 -91.274 -8.909 60.473 1.00 21.79 C
ATOM 8 O4' C A1880 -91.521 -10.171 61.130 1.00 21.79 O
ATOM 9 C3' C A1880 -90.293 -9.268 59.387 1.00 21.79 C
ATOM 10 O3' C A1880 -89.614 -8.153 58.875 1.00 21.79 O
ATOM 11 C2' C A1880 -89.387 -10.281 60.080 1.00 21.79 C
ATOM 12 O2' C A1880 -88.396 -9.635 60.867 1.00 21.79 O
ATOM 13 C1' C A1880 -90.369 -10.987 61.012 1.00 21.79 C
ATOM 14 N1 C A1880 -90.767 -12.289 60.499 1.00 22.29 N
ATOM 15 C2 C A1880 -89.978 -13.400 60.793 1.00 22.29 C
ATOM 16 O2 C A1880 -88.945 -13.231 61.475 1.00 22.29 O
ATOM 17 N3 C A1880 -90.378 -14.615 60.318 1.00 22.29 N
ATOM 18 C4 C A1880 -91.495 -14.714 59.590 1.00 22.29 C
ATOM 19 N4 C A1880 -91.882 -15.893 59.113 1.00 22.29 N
ATOM 20 C5 C A1880 -92.295 -13.588 59.295 1.00 22.29 C
ATOM 21 C6 C A1880 -91.900 -12.405 59.767 1.00 22.29 C
ATOM 22 P G A1881 -89.848 -7.737 57.353 1.00 21.41 P
ATOM 23 OP1 G A1881 -89.377 -6.343 57.201 1.00 21.41 O
ATOM 24 OP2 G A1881 -91.262 -8.059 57.030 1.00 21.41 O
ATOM 25 O5' G A1881 -88.873 -8.718 56.566 1.00 21.41 O
TER
ATOM 1 O3' A B1847 -85.213 -23.225 59.869 1.00 0.92 O
ATOM 2 P U B1848 -86.316 -23.215 61.013 1.00 8.48 P
ATOM 3 OP1 U B1848 -86.194 -24.475 61.756 1.00 8.48 O
ATOM 4 OP2 U B1848 -87.593 -22.908 60.367 1.00 8.48 O
ATOM 5 O5' U B1848 -85.859 -21.995 61.924 1.00 8.48 O
ATOM 6 C5' U B1848 -84.574 -21.429 61.773 1.00 8.48 C
ATOM 7 C4' U B1848 -84.505 -20.067 62.389 1.00 8.48 C
ATOM 8 O4' U B1848 -84.770 -19.049 61.389 1.00 8.48 O
ATOM 9 C3' U B1848 -85.511 -19.815 63.492 1.00 8.48 C
ATOM 10 O3' U B1848 -85.042 -20.271 64.750 1.00 8.48 O
ATOM 11 C2' U B1848 -85.731 -18.307 63.425 1.00 8.48 C
ATOM 12 O2' U B1848 -84.702 -17.614 64.119 1.00 8.48 O
ATOM 13 C1' U B1848 -85.584 -18.034 61.928 1.00 8.48 C
ATOM 14 N1 U B1848 -86.871 -18.079 61.222 1.00 9.09 N
ATOM 15 C2 U B1848 -87.557 -16.955 60.836 1.00 9.09 C
ATOM 16 O2 U B1848 -87.191 -15.828 61.089 1.00 9.09 O
ATOM 17 N3 U B1848 -88.717 -17.197 60.140 1.00 9.09 N
ATOM 18 C4 U B1848 -89.250 -18.429 59.778 1.00 9.09 C
ATOM 19 O4 U B1848 -90.316 -18.559 59.136 1.00 9.09 O
ATOM 20 C5 U B1848 -88.457 -19.527 60.212 1.00 9.09 C
ATOM 21 C6 U B1848 -87.329 -19.312 60.885 1.00 9.09 C
ATOM 22 P U B1849 -86.065 -20.535 65.951 1.00 19.43 P
ATOM 23 OP1 U B1849 -85.251 -20.761 67.167 1.00 19.43 O
ATOM 24 OP2 U B1849 -87.023 -21.599 65.512 1.00 19.43 O
ATOM 25 O5' U B1849 -86.837 -19.149 66.049 1.00 19.43 O
TER
Atoms:
C2: (-89.978,-13.400,60.793)
OP1: (-94.948,-7.424,58.437)
OP2: (-95.449,-9.897,58.063)
C4: (-91.495,-14.714,59.590)
O5': (-93.333,-9.177,59.241)
C3': (-90.293,-9.268,59.387)
C1': (-90.369,-10.987,61.012)
O4': (-91.521,-10.171,61.130)
C5': (-92.565,-8.291,60.025)
P: (-94.845,-8.828,58.899)
O2: (-88.945,-13.231,61.475)
C4': (-91.274,-8.909,60.473)
C2': (-89.387,-10.281,60.080)
O2': (-88.396,-9.635,60.867)
N1: (-90.767,-12.289,60.499)
N3: (-90.378,-14.615,60.318)
N4: (-91.882,-15.893,59.113)
C6: (-91.900,-12.405,59.767)
C5: (-92.295,-13.588,59.295)
O3': (-89.614,-8.153,58.875)
OP1: (-94.948,-7.424,58.437)
OP2: (-95.449,-9.897,58.063)
C4: (-91.495,-14.714,59.590)
O5': (-93.333,-9.177,59.241)
C3': (-90.293,-9.268,59.387)
C1': (-90.369,-10.987,61.012)
O4': (-91.521,-10.171,61.130)
C5': (-92.565,-8.291,60.025)
P: (-94.845,-8.828,58.899)
O2: (-88.945,-13.231,61.475)
C4': (-91.274,-8.909,60.473)
C2': (-89.387,-10.281,60.080)
O2': (-88.396,-9.635,60.867)
N1: (-90.767,-12.289,60.499)
N3: (-90.378,-14.615,60.318)
N4: (-91.882,-15.893,59.113)
C6: (-91.900,-12.405,59.767)
C5: (-92.295,-13.588,59.295)
O3': (-89.614,-8.153,58.875)
C4: (-89.250,-18.429,59.778)
N3: (-88.717,-17.197,60.140)
OP1: (-86.194,-24.475,61.756)
OP2: (-87.593,-22.908,60.367)
C2: (-87.557,-16.955,60.836)
C1': (-85.584,-18.034,61.928)
C3': (-85.511,-19.815,63.492)
O5': (-85.859,-21.995,61.924)
O4': (-84.770,-19.049,61.389)
C5': (-84.574,-21.429,61.773)
P: (-86.316,-23.215,61.013)
C4': (-84.505,-20.067,62.389)
C2': (-85.731,-18.307,63.425)
O2': (-84.702,-17.614,64.119)
N1: (-86.871,-18.079,61.222)
O4: (-90.316,-18.559,59.136)
O2: (-87.191,-15.828,61.089)
C6: (-87.329,-19.312,60.885)
C5: (-88.457,-19.527,60.212)
O3': (-85.042,-20.271,64.750)
N3: (-88.717,-17.197,60.140)
OP1: (-86.194,-24.475,61.756)
OP2: (-87.593,-22.908,60.367)
C2: (-87.557,-16.955,60.836)
C1': (-85.584,-18.034,61.928)
C3': (-85.511,-19.815,63.492)
O5': (-85.859,-21.995,61.924)
O4': (-84.770,-19.049,61.389)
C5': (-84.574,-21.429,61.773)
P: (-86.316,-23.215,61.013)
C4': (-84.505,-20.067,62.389)
C2': (-85.731,-18.307,63.425)
O2': (-84.702,-17.614,64.119)
N1: (-86.871,-18.079,61.222)
O4: (-90.316,-18.559,59.136)
O2: (-87.191,-15.828,61.089)
C6: (-87.329,-19.312,60.885)
C5: (-88.457,-19.527,60.212)
O3': (-85.042,-20.271,64.750)
Image (generated by PyMOL):