Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1879:A1847
Extra
PDB:
ATOM 1 O3' U A1878 -40.418 179.847 107.030 1.00 40.52 O
ATOM 2 P C A1879 -40.549 178.268 107.241 1.00 24.82 P
ATOM 3 OP1 C A1879 -40.950 177.673 105.950 1.00 24.82 O
ATOM 4 OP2 C A1879 -41.427 178.067 108.427 1.00 24.82 O
ATOM 5 O5' C A1879 -39.061 177.852 107.581 1.00 24.82 O
ATOM 6 C5' C A1879 -37.990 178.397 106.840 1.00 24.82 C
ATOM 7 C4' C A1879 -36.812 178.705 107.717 1.00 24.82 C
ATOM 8 O4' C A1879 -37.198 179.605 108.780 1.00 24.82 O
ATOM 9 C3' C A1879 -36.209 177.535 108.458 1.00 24.82 C
ATOM 10 O3' C A1879 -35.430 176.705 107.630 1.00 24.82 O
ATOM 11 C2' C A1879 -35.418 178.232 109.544 1.00 24.82 C
ATOM 12 O2' C A1879 -34.227 178.804 109.007 1.00 24.82 O
ATOM 13 C1' C A1879 -36.380 179.361 109.913 1.00 24.82 C
ATOM 14 N1 C A1879 -37.258 179.022 111.069 1.00 24.85 N
ATOM 15 C2 C A1879 -36.775 178.685 112.363 1.00 24.85 C
ATOM 16 O2 C A1879 -35.559 178.587 112.620 1.00 24.85 O
ATOM 17 N3 C A1879 -37.672 178.438 113.349 1.00 24.85 N
ATOM 18 C4 C A1879 -38.985 178.515 113.118 1.00 24.85 C
ATOM 19 N4 C A1879 -39.831 178.255 114.120 1.00 24.85 N
ATOM 20 C5 C A1879 -39.499 178.871 111.843 1.00 24.85 C
ATOM 21 C6 C A1879 -38.615 179.118 110.865 1.00 24.85 C
ATOM 22 P G A1880 -35.861 175.175 107.403 1.00 26.61 P
ATOM 23 OP1 G A1880 -35.605 174.857 105.977 1.00 26.61 O
ATOM 24 OP2 G A1880 -37.256 175.026 107.940 1.00 26.61 O
ATOM 25 O5' G A1880 -34.829 174.383 108.327 1.00 26.61 O
TER
ATOM 1 O3' A B1846 -35.454 178.494 123.648 1.00 7.01 O
ATOM 2 P U B1847 -36.118 179.867 123.120 1.00 26.77 P
ATOM 3 OP1 U B1847 -36.030 180.861 124.217 1.00 26.77 O
ATOM 4 OP2 U B1847 -37.461 179.526 122.581 1.00 26.77 O
ATOM 5 O5' U B1847 -35.131 180.279 121.943 1.00 26.77 O
ATOM 6 C5' U B1847 -33.728 180.350 122.165 1.00 26.77 C
ATOM 7 C4' U B1847 -32.971 180.392 120.868 1.00 26.77 C
ATOM 8 O4' U B1847 -33.325 179.240 120.069 1.00 26.77 O
ATOM 9 C3' U B1847 -33.274 181.577 119.960 1.00 26.77 C
ATOM 10 O3' U B1847 -32.550 182.734 120.316 1.00 26.77 O
ATOM 11 C2' U B1847 -32.917 181.039 118.586 1.00 26.77 C
ATOM 12 O2' U B1847 -31.505 181.024 118.405 1.00 26.77 O
ATOM 13 C1' U B1847 -33.398 179.598 118.703 1.00 26.77 C
ATOM 14 N1 U B1847 -34.805 179.421 118.246 1.00 26.84 N
ATOM 15 C2 U B1847 -35.037 178.858 117.006 1.00 26.84 C
ATOM 16 O2 U B1847 -34.136 178.543 116.241 1.00 26.84 O
ATOM 17 N3 U B1847 -36.360 178.694 116.671 1.00 26.84 N
ATOM 18 C4 U B1847 -37.458 179.013 117.432 1.00 26.84 C
ATOM 19 O4 U B1847 -38.596 178.811 116.996 1.00 26.84 O
ATOM 20 C5 U B1847 -37.138 179.575 118.700 1.00 26.84 C
ATOM 21 C6 U B1847 -35.861 179.746 119.052 1.00 26.84 C
ATOM 22 P U B1848 -33.306 184.133 120.466 1.00 41.28 P
ATOM 23 OP1 U B1848 -32.257 185.158 120.655 1.00 41.28 O
ATOM 24 OP2 U B1848 -34.346 183.975 121.511 1.00 41.28 O
ATOM 25 O5' U B1848 -34.000 184.306 119.049 1.00 41.28 O
TER
ATOM 2 P C A1879 -40.549 178.268 107.241 1.00 24.82 P
ATOM 3 OP1 C A1879 -40.950 177.673 105.950 1.00 24.82 O
ATOM 4 OP2 C A1879 -41.427 178.067 108.427 1.00 24.82 O
ATOM 5 O5' C A1879 -39.061 177.852 107.581 1.00 24.82 O
ATOM 6 C5' C A1879 -37.990 178.397 106.840 1.00 24.82 C
ATOM 7 C4' C A1879 -36.812 178.705 107.717 1.00 24.82 C
ATOM 8 O4' C A1879 -37.198 179.605 108.780 1.00 24.82 O
ATOM 9 C3' C A1879 -36.209 177.535 108.458 1.00 24.82 C
ATOM 10 O3' C A1879 -35.430 176.705 107.630 1.00 24.82 O
ATOM 11 C2' C A1879 -35.418 178.232 109.544 1.00 24.82 C
ATOM 12 O2' C A1879 -34.227 178.804 109.007 1.00 24.82 O
ATOM 13 C1' C A1879 -36.380 179.361 109.913 1.00 24.82 C
ATOM 14 N1 C A1879 -37.258 179.022 111.069 1.00 24.85 N
ATOM 15 C2 C A1879 -36.775 178.685 112.363 1.00 24.85 C
ATOM 16 O2 C A1879 -35.559 178.587 112.620 1.00 24.85 O
ATOM 17 N3 C A1879 -37.672 178.438 113.349 1.00 24.85 N
ATOM 18 C4 C A1879 -38.985 178.515 113.118 1.00 24.85 C
ATOM 19 N4 C A1879 -39.831 178.255 114.120 1.00 24.85 N
ATOM 20 C5 C A1879 -39.499 178.871 111.843 1.00 24.85 C
ATOM 21 C6 C A1879 -38.615 179.118 110.865 1.00 24.85 C
ATOM 22 P G A1880 -35.861 175.175 107.403 1.00 26.61 P
ATOM 23 OP1 G A1880 -35.605 174.857 105.977 1.00 26.61 O
ATOM 24 OP2 G A1880 -37.256 175.026 107.940 1.00 26.61 O
ATOM 25 O5' G A1880 -34.829 174.383 108.327 1.00 26.61 O
TER
ATOM 1 O3' A B1846 -35.454 178.494 123.648 1.00 7.01 O
ATOM 2 P U B1847 -36.118 179.867 123.120 1.00 26.77 P
ATOM 3 OP1 U B1847 -36.030 180.861 124.217 1.00 26.77 O
ATOM 4 OP2 U B1847 -37.461 179.526 122.581 1.00 26.77 O
ATOM 5 O5' U B1847 -35.131 180.279 121.943 1.00 26.77 O
ATOM 6 C5' U B1847 -33.728 180.350 122.165 1.00 26.77 C
ATOM 7 C4' U B1847 -32.971 180.392 120.868 1.00 26.77 C
ATOM 8 O4' U B1847 -33.325 179.240 120.069 1.00 26.77 O
ATOM 9 C3' U B1847 -33.274 181.577 119.960 1.00 26.77 C
ATOM 10 O3' U B1847 -32.550 182.734 120.316 1.00 26.77 O
ATOM 11 C2' U B1847 -32.917 181.039 118.586 1.00 26.77 C
ATOM 12 O2' U B1847 -31.505 181.024 118.405 1.00 26.77 O
ATOM 13 C1' U B1847 -33.398 179.598 118.703 1.00 26.77 C
ATOM 14 N1 U B1847 -34.805 179.421 118.246 1.00 26.84 N
ATOM 15 C2 U B1847 -35.037 178.858 117.006 1.00 26.84 C
ATOM 16 O2 U B1847 -34.136 178.543 116.241 1.00 26.84 O
ATOM 17 N3 U B1847 -36.360 178.694 116.671 1.00 26.84 N
ATOM 18 C4 U B1847 -37.458 179.013 117.432 1.00 26.84 C
ATOM 19 O4 U B1847 -38.596 178.811 116.996 1.00 26.84 O
ATOM 20 C5 U B1847 -37.138 179.575 118.700 1.00 26.84 C
ATOM 21 C6 U B1847 -35.861 179.746 119.052 1.00 26.84 C
ATOM 22 P U B1848 -33.306 184.133 120.466 1.00 41.28 P
ATOM 23 OP1 U B1848 -32.257 185.158 120.655 1.00 41.28 O
ATOM 24 OP2 U B1848 -34.346 183.975 121.511 1.00 41.28 O
ATOM 25 O5' U B1848 -34.000 184.306 119.049 1.00 41.28 O
TER
Atoms:
C2: (-36.775,178.685,112.363)
OP1: (-40.950,177.673,105.950)
OP2: (-41.427,178.067,108.427)
C4: (-38.985,178.515,113.118)
O5': (-39.061,177.852,107.581)
C3': (-36.209,177.535,108.458)
C1': (-36.380,179.361,109.913)
O4': (-37.198,179.605,108.780)
C5': (-37.990,178.397,106.840)
P: (-40.549,178.268,107.241)
O2: (-35.559,178.587,112.620)
C4': (-36.812,178.705,107.717)
C2': (-35.418,178.232,109.544)
O2': (-34.227,178.804,109.007)
N1: (-37.258,179.022,111.069)
N3: (-37.672,178.438,113.349)
N4: (-39.831,178.255,114.120)
C6: (-38.615,179.118,110.865)
C5: (-39.499,178.871,111.843)
O3': (-35.430,176.705,107.630)
OP1: (-40.950,177.673,105.950)
OP2: (-41.427,178.067,108.427)
C4: (-38.985,178.515,113.118)
O5': (-39.061,177.852,107.581)
C3': (-36.209,177.535,108.458)
C1': (-36.380,179.361,109.913)
O4': (-37.198,179.605,108.780)
C5': (-37.990,178.397,106.840)
P: (-40.549,178.268,107.241)
O2: (-35.559,178.587,112.620)
C4': (-36.812,178.705,107.717)
C2': (-35.418,178.232,109.544)
O2': (-34.227,178.804,109.007)
N1: (-37.258,179.022,111.069)
N3: (-37.672,178.438,113.349)
N4: (-39.831,178.255,114.120)
C6: (-38.615,179.118,110.865)
C5: (-39.499,178.871,111.843)
O3': (-35.430,176.705,107.630)
C4: (-37.458,179.013,117.432)
N3: (-36.360,178.694,116.671)
OP1: (-36.030,180.861,124.217)
OP2: (-37.461,179.526,122.581)
C2: (-35.037,178.858,117.006)
C1': (-33.398,179.598,118.703)
C3': (-33.274,181.577,119.960)
O5': (-35.131,180.279,121.943)
O4': (-33.325,179.240,120.069)
C5': (-33.728,180.350,122.165)
P: (-36.118,179.867,123.120)
C4': (-32.971,180.392,120.868)
C2': (-32.917,181.039,118.586)
O2': (-31.505,181.024,118.405)
N1: (-34.805,179.421,118.246)
O4: (-38.596,178.811,116.996)
O2: (-34.136,178.543,116.241)
C6: (-35.861,179.746,119.052)
C5: (-37.138,179.575,118.700)
O3': (-32.550,182.734,120.316)
N3: (-36.360,178.694,116.671)
OP1: (-36.030,180.861,124.217)
OP2: (-37.461,179.526,122.581)
C2: (-35.037,178.858,117.006)
C1': (-33.398,179.598,118.703)
C3': (-33.274,181.577,119.960)
O5': (-35.131,180.279,121.943)
O4': (-33.325,179.240,120.069)
C5': (-33.728,180.350,122.165)
P: (-36.118,179.867,123.120)
C4': (-32.971,180.392,120.868)
C2': (-32.917,181.039,118.586)
O2': (-31.505,181.024,118.405)
N1: (-34.805,179.421,118.246)
O4: (-38.596,178.811,116.996)
O2: (-34.136,178.543,116.241)
C6: (-35.861,179.746,119.052)
C5: (-37.138,179.575,118.700)
O3': (-32.550,182.734,120.316)
Image (generated by PyMOL):