Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11081:11065
Extra
PDB:
ATOM 1 O3' A A1080 41.431 -32.244 40.931 1.00 35.14 O
ATOM 2 P C A1081 42.816 -31.971 41.650 1.00 37.22 P
ATOM 3 OP1 C A1081 43.173 -33.243 42.339 1.00 37.31 O
ATOM 4 OP2 C A1081 42.650 -30.740 42.443 1.00 36.92 O
ATOM 5 O5' C A1081 43.830 -31.660 40.460 1.00 37.36 O
ATOM 6 C5' C A1081 44.236 -32.636 39.547 1.00 37.66 C
ATOM 7 C4' C A1081 44.693 -32.017 38.249 1.00 37.79 C
ATOM 8 O4' C A1081 43.646 -31.185 37.649 1.00 37.78 O
ATOM 9 C3' C A1081 45.857 -31.063 38.326 1.00 37.63 C
ATOM 10 O3' C A1081 47.083 -31.707 38.559 1.00 37.70 O
ATOM 11 C2' C A1081 45.786 -30.390 36.972 1.00 37.78 C
ATOM 12 O2' C A1081 46.301 -31.254 35.991 1.00 38.09 O
ATOM 13 C1' C A1081 44.264 -30.242 36.769 1.00 37.80 C
ATOM 14 N1 C A1081 43.835 -28.871 37.125 1.00 37.54 N
ATOM 15 C2 C A1081 44.087 -27.811 36.247 1.00 37.56 C
ATOM 16 O2 C A1081 44.576 -28.119 35.194 1.00 37.80 O
ATOM 17 N3 C A1081 43.825 -26.520 36.531 1.00 37.35 N
ATOM 18 C4 C A1081 43.327 -26.302 37.750 1.00 37.10 C
ATOM 19 N4 C A1081 43.042 -25.080 38.151 1.00 36.89 N
ATOM 20 C5 C A1081 43.055 -27.317 38.689 1.00 37.06 C
ATOM 21 C6 C A1081 43.326 -28.586 38.349 1.00 37.28 C
ATOM 22 P U A1082 48.127 -31.078 39.607 1.00 34.12 P
ATOM 23 OP1 U A1082 49.056 -32.155 39.924 1.00 34.25 O
ATOM 24 OP2 U A1082 47.376 -30.454 40.698 1.00 33.84 O
ATOM 25 O5' U A1082 48.842 -29.941 38.751 1.00 34.11 O
TER
ATOM 1 O3' A B1064 42.485 -15.271 33.910 1.00 39.61 O
ATOM 2 P U B1065 41.408 -16.073 33.053 1.00 45.53 P
ATOM 3 OP1 U B1065 40.891 -15.075 32.069 1.00 45.70 O
ATOM 4 OP2 U B1065 40.463 -16.726 34.029 1.00 45.40 O
ATOM 5 O5' U B1065 42.247 -17.206 32.306 1.00 45.74 O
ATOM 6 C5' U B1065 42.578 -17.092 30.935 1.00 46.02 C
ATOM 7 C4' U B1065 43.135 -18.382 30.413 1.00 46.21 C
ATOM 8 O4' U B1065 44.085 -18.918 31.353 1.00 46.03 O
ATOM 9 C3' U B1065 42.145 -19.484 30.268 1.00 46.35 C
ATOM 10 O3' U B1065 41.376 -19.325 29.117 1.00 46.62 O
ATOM 11 C2' U B1065 43.030 -20.728 30.281 1.00 46.43 C
ATOM 12 O2' U B1065 43.681 -20.903 29.035 1.00 46.72 O
ATOM 13 C1' U B1065 44.080 -20.320 31.303 1.00 46.15 C
ATOM 14 N1 U B1065 43.784 -20.825 32.651 1.00 45.91 N
ATOM 15 C2 U B1065 44.108 -22.107 32.929 1.00 45.96 C
ATOM 16 O2 U B1065 44.601 -22.823 32.085 1.00 46.21 O
ATOM 17 N3 U B1065 43.842 -22.543 34.195 1.00 45.75 N
ATOM 18 C4 U B1065 43.258 -21.817 35.188 1.00 45.49 C
ATOM 19 O4 U B1065 43.030 -22.353 36.273 1.00 45.34 O
ATOM 20 C5 U B1065 42.950 -20.480 34.812 1.00 45.45 C
ATOM 21 C6 U B1065 43.228 -20.035 33.597 1.00 45.65 C
ATOM 22 P U B1066 39.881 -19.871 29.053 1.00 43.76 P
ATOM 23 OP1 U B1066 39.413 -19.590 27.696 1.00 44.08 O
ATOM 24 OP2 U B1066 39.109 -19.299 30.206 1.00 43.48 O
ATOM 25 O5' U B1066 40.087 -21.439 29.273 1.00 43.84 O
TER
ATOM 2 P C A1081 42.816 -31.971 41.650 1.00 37.22 P
ATOM 3 OP1 C A1081 43.173 -33.243 42.339 1.00 37.31 O
ATOM 4 OP2 C A1081 42.650 -30.740 42.443 1.00 36.92 O
ATOM 5 O5' C A1081 43.830 -31.660 40.460 1.00 37.36 O
ATOM 6 C5' C A1081 44.236 -32.636 39.547 1.00 37.66 C
ATOM 7 C4' C A1081 44.693 -32.017 38.249 1.00 37.79 C
ATOM 8 O4' C A1081 43.646 -31.185 37.649 1.00 37.78 O
ATOM 9 C3' C A1081 45.857 -31.063 38.326 1.00 37.63 C
ATOM 10 O3' C A1081 47.083 -31.707 38.559 1.00 37.70 O
ATOM 11 C2' C A1081 45.786 -30.390 36.972 1.00 37.78 C
ATOM 12 O2' C A1081 46.301 -31.254 35.991 1.00 38.09 O
ATOM 13 C1' C A1081 44.264 -30.242 36.769 1.00 37.80 C
ATOM 14 N1 C A1081 43.835 -28.871 37.125 1.00 37.54 N
ATOM 15 C2 C A1081 44.087 -27.811 36.247 1.00 37.56 C
ATOM 16 O2 C A1081 44.576 -28.119 35.194 1.00 37.80 O
ATOM 17 N3 C A1081 43.825 -26.520 36.531 1.00 37.35 N
ATOM 18 C4 C A1081 43.327 -26.302 37.750 1.00 37.10 C
ATOM 19 N4 C A1081 43.042 -25.080 38.151 1.00 36.89 N
ATOM 20 C5 C A1081 43.055 -27.317 38.689 1.00 37.06 C
ATOM 21 C6 C A1081 43.326 -28.586 38.349 1.00 37.28 C
ATOM 22 P U A1082 48.127 -31.078 39.607 1.00 34.12 P
ATOM 23 OP1 U A1082 49.056 -32.155 39.924 1.00 34.25 O
ATOM 24 OP2 U A1082 47.376 -30.454 40.698 1.00 33.84 O
ATOM 25 O5' U A1082 48.842 -29.941 38.751 1.00 34.11 O
TER
ATOM 1 O3' A B1064 42.485 -15.271 33.910 1.00 39.61 O
ATOM 2 P U B1065 41.408 -16.073 33.053 1.00 45.53 P
ATOM 3 OP1 U B1065 40.891 -15.075 32.069 1.00 45.70 O
ATOM 4 OP2 U B1065 40.463 -16.726 34.029 1.00 45.40 O
ATOM 5 O5' U B1065 42.247 -17.206 32.306 1.00 45.74 O
ATOM 6 C5' U B1065 42.578 -17.092 30.935 1.00 46.02 C
ATOM 7 C4' U B1065 43.135 -18.382 30.413 1.00 46.21 C
ATOM 8 O4' U B1065 44.085 -18.918 31.353 1.00 46.03 O
ATOM 9 C3' U B1065 42.145 -19.484 30.268 1.00 46.35 C
ATOM 10 O3' U B1065 41.376 -19.325 29.117 1.00 46.62 O
ATOM 11 C2' U B1065 43.030 -20.728 30.281 1.00 46.43 C
ATOM 12 O2' U B1065 43.681 -20.903 29.035 1.00 46.72 O
ATOM 13 C1' U B1065 44.080 -20.320 31.303 1.00 46.15 C
ATOM 14 N1 U B1065 43.784 -20.825 32.651 1.00 45.91 N
ATOM 15 C2 U B1065 44.108 -22.107 32.929 1.00 45.96 C
ATOM 16 O2 U B1065 44.601 -22.823 32.085 1.00 46.21 O
ATOM 17 N3 U B1065 43.842 -22.543 34.195 1.00 45.75 N
ATOM 18 C4 U B1065 43.258 -21.817 35.188 1.00 45.49 C
ATOM 19 O4 U B1065 43.030 -22.353 36.273 1.00 45.34 O
ATOM 20 C5 U B1065 42.950 -20.480 34.812 1.00 45.45 C
ATOM 21 C6 U B1065 43.228 -20.035 33.597 1.00 45.65 C
ATOM 22 P U B1066 39.881 -19.871 29.053 1.00 43.76 P
ATOM 23 OP1 U B1066 39.413 -19.590 27.696 1.00 44.08 O
ATOM 24 OP2 U B1066 39.109 -19.299 30.206 1.00 43.48 O
ATOM 25 O5' U B1066 40.087 -21.439 29.273 1.00 43.84 O
TER
Atoms:
C2: (44.087,-27.811,36.247)
OP1: (43.173,-33.243,42.339)
OP2: (42.650,-30.740,42.443)
C4: (43.327,-26.302,37.750)
O5': (43.830,-31.660,40.460)
C3': (45.857,-31.063,38.326)
C1': (44.264,-30.242,36.769)
O4': (43.646,-31.185,37.649)
C5': (44.236,-32.636,39.547)
P: (42.816,-31.971,41.650)
O2: (44.576,-28.119,35.194)
C4': (44.693,-32.017,38.249)
C2': (45.786,-30.390,36.972)
O2': (46.301,-31.254,35.991)
N1: (43.835,-28.871,37.125)
N3: (43.825,-26.520,36.531)
N4: (43.042,-25.080,38.151)
C6: (43.326,-28.586,38.349)
C5: (43.055,-27.317,38.689)
O3': (47.083,-31.707,38.559)
OP1: (43.173,-33.243,42.339)
OP2: (42.650,-30.740,42.443)
C4: (43.327,-26.302,37.750)
O5': (43.830,-31.660,40.460)
C3': (45.857,-31.063,38.326)
C1': (44.264,-30.242,36.769)
O4': (43.646,-31.185,37.649)
C5': (44.236,-32.636,39.547)
P: (42.816,-31.971,41.650)
O2: (44.576,-28.119,35.194)
C4': (44.693,-32.017,38.249)
C2': (45.786,-30.390,36.972)
O2': (46.301,-31.254,35.991)
N1: (43.835,-28.871,37.125)
N3: (43.825,-26.520,36.531)
N4: (43.042,-25.080,38.151)
C6: (43.326,-28.586,38.349)
C5: (43.055,-27.317,38.689)
O3': (47.083,-31.707,38.559)
C4: (43.258,-21.817,35.188)
N3: (43.842,-22.543,34.195)
OP1: (40.891,-15.075,32.069)
OP2: (40.463,-16.726,34.029)
C2: (44.108,-22.107,32.929)
C1': (44.080,-20.320,31.303)
C3': (42.145,-19.484,30.268)
O5': (42.247,-17.206,32.306)
O4': (44.085,-18.918,31.353)
C5': (42.578,-17.092,30.935)
P: (41.408,-16.073,33.053)
C4': (43.135,-18.382,30.413)
C2': (43.030,-20.728,30.281)
O2': (43.681,-20.903,29.035)
N1: (43.784,-20.825,32.651)
O4: (43.030,-22.353,36.273)
O2: (44.601,-22.823,32.085)
C6: (43.228,-20.035,33.597)
C5: (42.950,-20.480,34.812)
O3': (41.376,-19.325,29.117)
N3: (43.842,-22.543,34.195)
OP1: (40.891,-15.075,32.069)
OP2: (40.463,-16.726,34.029)
C2: (44.108,-22.107,32.929)
C1': (44.080,-20.320,31.303)
C3': (42.145,-19.484,30.268)
O5': (42.247,-17.206,32.306)
O4': (44.085,-18.918,31.353)
C5': (42.578,-17.092,30.935)
P: (41.408,-16.073,33.053)
C4': (43.135,-18.382,30.413)
C2': (43.030,-20.728,30.281)
O2': (43.681,-20.903,29.035)
N1: (43.784,-20.825,32.651)
O4: (43.030,-22.353,36.273)
O2: (44.601,-22.823,32.085)
C6: (43.228,-20.035,33.597)
C5: (42.950,-20.480,34.812)
O3': (41.376,-19.325,29.117)
Image (generated by PyMOL):