ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A443:A439

Extra

PDB:
ATOM 1 O3' G A 442 39.612 18.696 101.214 1.00146.22 O
ATOM 2 P A A 443 40.924 19.636 101.060 1.00143.36 P
ATOM 3 OP1 A A 443 41.215 19.776 99.606 1.00126.40 O
ATOM 4 OP2 A A 443 41.965 19.083 101.970 1.00137.22 O
ATOM 5 O5' A A 443 40.502 21.064 101.641 1.00136.79 O
ATOM 6 C5' A A 443 40.163 22.163 100.790 1.00126.47 C
ATOM 7 C4' A A 443 40.004 23.429 101.610 1.00124.97 C
ATOM 8 O4' A A 443 39.036 23.203 102.663 1.00128.05 O
ATOM 9 C3' A A 443 41.255 23.932 102.326 1.00129.42 C
ATOM 10 O3' A A 443 41.952 24.797 101.440 1.00129.04 O
ATOM 11 C2' A A 443 40.691 24.708 103.515 1.00130.98 C
ATOM 12 O2' A A 443 40.356 26.044 103.208 1.00130.97 O
ATOM 13 C1' A A 443 39.400 23.946 103.814 1.00130.00 C
ATOM 14 N9 A A 443 39.460 23.044 104.966 1.00131.42 N
ATOM 15 C8 A A 443 39.308 21.682 104.976 1.00136.14 C
ATOM 16 N7 A A 443 39.383 21.146 106.170 1.00142.15 N
ATOM 17 C5 A A 443 39.608 22.226 107.007 1.00136.59 C
ATOM 18 C6 A A 443 39.777 22.327 108.403 1.00136.04 C
ATOM 19 N6 A A 443 39.732 21.286 109.245 1.00135.72 N
ATOM 20 N1 A A 443 39.999 23.553 108.915 1.00134.47 N
ATOM 21 C2 A A 443 40.035 24.601 108.081 1.00131.89 C
ATOM 22 N3 A A 443 39.882 24.637 106.760 1.00131.07 N
ATOM 23 C4 A A 443 39.669 23.404 106.277 1.00132.05 C
ATOM 24 P G A 444 43.498 25.150 101.695 1.00130.92 P
ATOM 25 OP1 G A 444 43.697 26.480 101.058 1.00122.70 O
ATOM 26 OP2 G A 444 44.316 23.995 101.247 1.00127.72 O
ATOM 27 O5' G A 444 43.645 25.280 103.276 1.00131.48 O
TER

ATOM 1 O3' C B 438 40.086 16.597 117.338 1.00124.21 O
ATOM 2 P G B 439 38.655 16.681 116.614 1.00128.39 P
ATOM 3 OP1 G B 439 37.654 17.122 117.613 1.00127.10 O
ATOM 4 OP2 G B 439 38.444 15.408 115.885 1.00132.39 O
ATOM 5 O5' G B 439 38.837 17.836 115.527 1.00136.47 O
ATOM 6 C5' G B 439 38.409 19.184 115.778 1.00136.02 C
ATOM 7 C4' G B 439 38.143 19.902 114.471 1.00139.26 C
ATOM 8 O4' G B 439 39.379 19.994 113.719 1.00139.17 O
ATOM 9 C3' G B 439 37.192 19.160 113.548 1.00139.63 C
ATOM 10 O3' G B 439 35.848 19.485 113.813 1.00133.46 O
ATOM 11 C2' G B 439 37.626 19.593 112.156 1.00140.04 C
ATOM 12 O2' G B 439 37.057 20.815 111.733 1.00141.95 O
ATOM 13 C1' G B 439 39.134 19.727 112.348 1.00139.51 C
ATOM 14 N9 G B 439 39.812 18.478 112.019 1.00141.75 N
ATOM 15 C8 G B 439 40.387 17.590 112.900 1.00139.95 C
ATOM 16 N7 G B 439 40.925 16.560 112.311 1.00140.73 N
ATOM 17 C5 G B 439 40.693 16.778 110.960 1.00145.13 C
ATOM 18 C6 G B 439 41.053 16.004 109.833 1.00147.62 C
ATOM 19 O6 G B 439 41.687 14.940 109.802 1.00145.84 O
ATOM 20 N1 G B 439 40.604 16.584 108.648 1.00148.93 N
ATOM 21 C2 G B 439 39.903 17.765 108.562 1.00147.34 C
ATOM 22 N2 G B 439 39.550 18.158 107.333 1.00145.18 N
ATOM 23 N3 G B 439 39.572 18.504 109.606 1.00146.82 N
ATOM 24 C4 G B 439 39.997 17.955 110.765 1.00145.32 C
ATOM 25 P A B 440 34.705 18.411 113.499 1.00146.77 P
ATOM 26 OP1 A B 440 33.668 19.107 112.688 1.00147.83 O
ATOM 27 OP2 A B 440 34.341 17.805 114.807 1.00147.19 O
ATOM 28 O5' A B 440 35.416 17.292 112.605 1.00148.58 O
TER

Atoms:
OP1: (41.215,19.776,99.606)
OP2: (41.965,19.083,101.970)
C3': (41.255,23.932,102.326)
C1': (39.400,23.946,103.814)
C5': (40.163,22.163,100.790)
O4': (39.036,23.203,102.663)
C8: (39.308,21.682,104.976)
O2': (40.356,26.044,103.208)
C6: (39.777,22.327,108.403)
C5: (39.608,22.226,107.007)
C4: (39.669,23.404,106.277)
P: (40.924,19.636,101.060)
C4': (40.004,23.429,101.610)
C2': (40.691,24.708,103.515)
C2: (40.035,24.601,108.081)
N1: (39.999,23.553,108.915)
N3: (39.882,24.637,106.760)
N6: (39.732,21.286,109.245)
N7: (39.383,21.146,106.170)
N9: (39.460,23.044,104.966)
O5': (40.502,21.064,101.641)
O3': (41.952,24.797,101.440)
OP1: (37.654,17.122,117.613)
OP2: (38.444,15.408,115.885)
C3': (37.192,19.160,113.548)
C1': (39.134,19.727,112.348)
C5': (38.409,19.184,115.778)
O6: (41.687,14.940,109.802)
O4': (39.379,19.994,113.719)
C8: (40.387,17.590,112.900)
C2: (39.903,17.765,108.562)
C6: (41.053,16.004,109.833)
C5: (40.693,16.778,110.960)
C4: (39.997,17.955,110.765)
P: (38.655,16.681,116.614)
C4': (38.143,19.902,114.471)
C2': (37.626,19.593,112.156)
O2': (37.057,20.815,111.733)
N1: (40.604,16.584,108.648)
N2: (39.550,18.158,107.333)
N3: (39.572,18.504,109.606)
N7: (40.925,16.560,112.311)
N9: (39.812,18.478,112.019)
O5': (38.837,17.836,115.527)
O3': (35.848,19.485,113.813)
Image (generated by PyMOL):
PyMOL image
show in jmol