Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A28:A63
Extra
PDB:
ATOM 1 O3' U A 27 9.085 56.079 21.422 1.00 29.76 O
ATOM 2 P A A 28 7.608 56.519 20.980 1.00 30.35 P
ATOM 3 OP1 A A 28 7.655 56.830 19.535 1.00 30.84 O
ATOM 4 OP2 A A 28 7.115 57.562 21.911 1.00 29.77 O
ATOM 5 O5' A A 28 6.763 55.171 21.200 1.00 31.55 O
ATOM 6 C5' A A 28 6.595 54.216 20.145 1.00 33.12 C
ATOM 7 C4' A A 28 5.788 53.008 20.595 1.00 34.22 C
ATOM 8 O4' A A 28 6.283 52.544 21.875 1.00 34.32 O
ATOM 9 C3' A A 28 4.310 53.262 20.849 1.00 35.15 C
ATOM 10 O3' A A 28 3.536 53.154 19.663 1.00 36.72 O
ATOM 11 C2' A A 28 3.943 52.164 21.837 1.00 34.73 C
ATOM 12 O2' A A 28 3.700 50.916 21.212 1.00 35.05 O
ATOM 13 C1' A A 28 5.203 52.103 22.686 1.00 34.07 C
ATOM 14 N9 A A 28 5.158 52.889 23.925 1.00 33.49 N
ATOM 15 C8 A A 28 5.884 54.012 24.216 1.00 33.06 C
ATOM 16 N7 A A 28 5.660 54.500 25.413 1.00 32.73 N
ATOM 17 C5 A A 28 4.724 53.636 25.951 1.00 32.42 C
ATOM 18 C6 A A 28 4.074 53.603 27.198 1.00 32.14 C
ATOM 19 N6 A A 28 4.298 54.510 28.149 1.00 33.18 N
ATOM 20 N1 A A 28 3.188 52.611 27.435 1.00 31.88 N
ATOM 21 C2 A A 28 2.971 51.705 26.473 1.00 32.30 C
ATOM 22 N3 A A 28 3.527 51.629 25.260 1.00 32.71 N
ATOM 23 C4 A A 28 4.402 52.634 25.054 1.00 32.88 C
ATOM 24 P G A 29 2.367 54.222 19.425 1.00 38.27 P
ATOM 25 OP1 G A 29 1.617 53.843 18.203 1.00 38.19 O
ATOM 26 OP2 G A 29 2.980 55.568 19.526 1.00 37.91 O
ATOM 27 O5' G A 29 1.420 54.029 20.704 1.00 38.89 O
TER
ATOM 1 O3' U B 62 2.574 60.326 35.151 1.00 41.17 O
ATOM 2 P G B 63 3.702 59.284 35.595 1.00 40.45 P
ATOM 3 OP1 G B 63 3.257 58.659 36.860 1.00 40.83 O
ATOM 4 OP2 G B 63 5.013 59.974 35.531 1.00 40.30 O
ATOM 5 O5' G B 63 3.698 58.187 34.432 1.00 39.33 O
ATOM 6 C5' G B 63 2.830 57.062 34.435 1.00 37.43 C
ATOM 7 C4' G B 63 3.060 56.243 33.176 1.00 36.03 C
ATOM 8 O4' G B 63 2.967 57.106 32.009 1.00 35.14 O
ATOM 9 C3' G B 63 4.444 55.611 33.039 1.00 35.13 C
ATOM 10 O3' G B 63 4.608 54.402 33.770 1.00 34.65 O
ATOM 11 C2' G B 63 4.548 55.422 31.528 1.00 34.58 C
ATOM 12 O2' G B 63 3.799 54.331 31.029 1.00 34.54 O
ATOM 13 C1' G B 63 3.964 56.751 31.062 1.00 34.03 C
ATOM 14 N9 G B 63 4.998 57.784 31.004 1.00 32.99 N
ATOM 15 C8 G B 63 5.357 58.653 32.005 1.00 32.61 C
ATOM 16 N7 G B 63 6.324 59.461 31.687 1.00 32.77 N
ATOM 17 C5 G B 63 6.633 59.104 30.388 1.00 32.45 C
ATOM 18 C6 G B 63 7.609 59.641 29.524 1.00 32.43 C
ATOM 19 O6 G B 63 8.397 60.563 29.770 1.00 33.11 O
ATOM 20 N1 G B 63 7.614 59.008 28.279 1.00 31.96 N
ATOM 21 C2 G B 63 6.772 57.978 27.924 1.00 31.51 C
ATOM 22 N2 G B 63 6.918 57.486 26.687 1.00 31.45 N
ATOM 23 N3 G B 63 5.851 57.465 28.733 1.00 31.79 N
ATOM 24 C4 G B 63 5.834 58.073 29.947 1.00 32.40 C
ATOM 25 P A B 64 6.054 54.094 34.399 1.00 35.15 P
ATOM 26 OP1 A B 64 5.829 53.304 35.634 1.00 35.73 O
ATOM 27 OP2 A B 64 6.849 55.344 34.477 1.00 35.06 O
ATOM 28 O5' A B 64 6.745 53.186 33.273 1.00 33.80 O
TER
ATOM 2 P A A 28 7.608 56.519 20.980 1.00 30.35 P
ATOM 3 OP1 A A 28 7.655 56.830 19.535 1.00 30.84 O
ATOM 4 OP2 A A 28 7.115 57.562 21.911 1.00 29.77 O
ATOM 5 O5' A A 28 6.763 55.171 21.200 1.00 31.55 O
ATOM 6 C5' A A 28 6.595 54.216 20.145 1.00 33.12 C
ATOM 7 C4' A A 28 5.788 53.008 20.595 1.00 34.22 C
ATOM 8 O4' A A 28 6.283 52.544 21.875 1.00 34.32 O
ATOM 9 C3' A A 28 4.310 53.262 20.849 1.00 35.15 C
ATOM 10 O3' A A 28 3.536 53.154 19.663 1.00 36.72 O
ATOM 11 C2' A A 28 3.943 52.164 21.837 1.00 34.73 C
ATOM 12 O2' A A 28 3.700 50.916 21.212 1.00 35.05 O
ATOM 13 C1' A A 28 5.203 52.103 22.686 1.00 34.07 C
ATOM 14 N9 A A 28 5.158 52.889 23.925 1.00 33.49 N
ATOM 15 C8 A A 28 5.884 54.012 24.216 1.00 33.06 C
ATOM 16 N7 A A 28 5.660 54.500 25.413 1.00 32.73 N
ATOM 17 C5 A A 28 4.724 53.636 25.951 1.00 32.42 C
ATOM 18 C6 A A 28 4.074 53.603 27.198 1.00 32.14 C
ATOM 19 N6 A A 28 4.298 54.510 28.149 1.00 33.18 N
ATOM 20 N1 A A 28 3.188 52.611 27.435 1.00 31.88 N
ATOM 21 C2 A A 28 2.971 51.705 26.473 1.00 32.30 C
ATOM 22 N3 A A 28 3.527 51.629 25.260 1.00 32.71 N
ATOM 23 C4 A A 28 4.402 52.634 25.054 1.00 32.88 C
ATOM 24 P G A 29 2.367 54.222 19.425 1.00 38.27 P
ATOM 25 OP1 G A 29 1.617 53.843 18.203 1.00 38.19 O
ATOM 26 OP2 G A 29 2.980 55.568 19.526 1.00 37.91 O
ATOM 27 O5' G A 29 1.420 54.029 20.704 1.00 38.89 O
TER
ATOM 1 O3' U B 62 2.574 60.326 35.151 1.00 41.17 O
ATOM 2 P G B 63 3.702 59.284 35.595 1.00 40.45 P
ATOM 3 OP1 G B 63 3.257 58.659 36.860 1.00 40.83 O
ATOM 4 OP2 G B 63 5.013 59.974 35.531 1.00 40.30 O
ATOM 5 O5' G B 63 3.698 58.187 34.432 1.00 39.33 O
ATOM 6 C5' G B 63 2.830 57.062 34.435 1.00 37.43 C
ATOM 7 C4' G B 63 3.060 56.243 33.176 1.00 36.03 C
ATOM 8 O4' G B 63 2.967 57.106 32.009 1.00 35.14 O
ATOM 9 C3' G B 63 4.444 55.611 33.039 1.00 35.13 C
ATOM 10 O3' G B 63 4.608 54.402 33.770 1.00 34.65 O
ATOM 11 C2' G B 63 4.548 55.422 31.528 1.00 34.58 C
ATOM 12 O2' G B 63 3.799 54.331 31.029 1.00 34.54 O
ATOM 13 C1' G B 63 3.964 56.751 31.062 1.00 34.03 C
ATOM 14 N9 G B 63 4.998 57.784 31.004 1.00 32.99 N
ATOM 15 C8 G B 63 5.357 58.653 32.005 1.00 32.61 C
ATOM 16 N7 G B 63 6.324 59.461 31.687 1.00 32.77 N
ATOM 17 C5 G B 63 6.633 59.104 30.388 1.00 32.45 C
ATOM 18 C6 G B 63 7.609 59.641 29.524 1.00 32.43 C
ATOM 19 O6 G B 63 8.397 60.563 29.770 1.00 33.11 O
ATOM 20 N1 G B 63 7.614 59.008 28.279 1.00 31.96 N
ATOM 21 C2 G B 63 6.772 57.978 27.924 1.00 31.51 C
ATOM 22 N2 G B 63 6.918 57.486 26.687 1.00 31.45 N
ATOM 23 N3 G B 63 5.851 57.465 28.733 1.00 31.79 N
ATOM 24 C4 G B 63 5.834 58.073 29.947 1.00 32.40 C
ATOM 25 P A B 64 6.054 54.094 34.399 1.00 35.15 P
ATOM 26 OP1 A B 64 5.829 53.304 35.634 1.00 35.73 O
ATOM 27 OP2 A B 64 6.849 55.344 34.477 1.00 35.06 O
ATOM 28 O5' A B 64 6.745 53.186 33.273 1.00 33.80 O
TER
Atoms:
OP1: (7.655,56.830,19.535)
OP2: (7.115,57.562,21.911)
C3': (4.310,53.262,20.849)
C1': (5.203,52.103,22.686)
C5': (6.595,54.216,20.145)
O4': (6.283,52.544,21.875)
C8: (5.884,54.012,24.216)
O2': (3.700,50.916,21.212)
C6: (4.074,53.603,27.198)
C5: (4.724,53.636,25.951)
C4: (4.402,52.634,25.054)
P: (7.608,56.519,20.980)
C4': (5.788,53.008,20.595)
C2': (3.943,52.164,21.837)
C2: (2.971,51.705,26.473)
N1: (3.188,52.611,27.435)
N3: (3.527,51.629,25.260)
N6: (4.298,54.510,28.149)
N7: (5.660,54.500,25.413)
N9: (5.158,52.889,23.925)
O5': (6.763,55.171,21.200)
O3': (3.536,53.154,19.663)
OP2: (7.115,57.562,21.911)
C3': (4.310,53.262,20.849)
C1': (5.203,52.103,22.686)
C5': (6.595,54.216,20.145)
O4': (6.283,52.544,21.875)
C8: (5.884,54.012,24.216)
O2': (3.700,50.916,21.212)
C6: (4.074,53.603,27.198)
C5: (4.724,53.636,25.951)
C4: (4.402,52.634,25.054)
P: (7.608,56.519,20.980)
C4': (5.788,53.008,20.595)
C2': (3.943,52.164,21.837)
C2: (2.971,51.705,26.473)
N1: (3.188,52.611,27.435)
N3: (3.527,51.629,25.260)
N6: (4.298,54.510,28.149)
N7: (5.660,54.500,25.413)
N9: (5.158,52.889,23.925)
O5': (6.763,55.171,21.200)
O3': (3.536,53.154,19.663)
OP1: (3.257,58.659,36.860)
OP2: (5.013,59.974,35.531)
C3': (4.444,55.611,33.039)
C1': (3.964,56.751,31.062)
C5': (2.830,57.062,34.435)
O6: (8.397,60.563,29.770)
O4': (2.967,57.106,32.009)
C8: (5.357,58.653,32.005)
C2: (6.772,57.978,27.924)
C6: (7.609,59.641,29.524)
C5: (6.633,59.104,30.388)
C4: (5.834,58.073,29.947)
P: (3.702,59.284,35.595)
C4': (3.060,56.243,33.176)
C2': (4.548,55.422,31.528)
O2': (3.799,54.331,31.029)
N1: (7.614,59.008,28.279)
N2: (6.918,57.486,26.687)
N3: (5.851,57.465,28.733)
N7: (6.324,59.461,31.687)
N9: (4.998,57.784,31.004)
O5': (3.698,58.187,34.432)
O3': (4.608,54.402,33.770)
OP2: (5.013,59.974,35.531)
C3': (4.444,55.611,33.039)
C1': (3.964,56.751,31.062)
C5': (2.830,57.062,34.435)
O6: (8.397,60.563,29.770)
O4': (2.967,57.106,32.009)
C8: (5.357,58.653,32.005)
C2: (6.772,57.978,27.924)
C6: (7.609,59.641,29.524)
C5: (6.633,59.104,30.388)
C4: (5.834,58.073,29.947)
P: (3.702,59.284,35.595)
C4': (3.060,56.243,33.176)
C2': (4.548,55.422,31.528)
O2': (3.799,54.331,31.029)
N1: (7.614,59.008,28.279)
N2: (6.918,57.486,26.687)
N3: (5.851,57.465,28.733)
N7: (6.324,59.461,31.687)
N9: (4.998,57.784,31.004)
O5': (3.698,58.187,34.432)
O3': (4.608,54.402,33.770)
Image (generated by PyMOL):