ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0180:0191

Extra

PDB:
ATOM 1 O3' A A 179 71.656 102.032 13.753 1.00 51.89 O
ATOM 2 P A A 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 3 OP1 A A 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 4 OP2 A A 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 5 O5' A A 180 73.183 100.602 15.108 1.00 53.19 O
ATOM 6 C5' A A 180 74.378 99.883 15.459 1.00 52.20 C
ATOM 7 C4' A A 180 74.447 99.676 16.955 1.00 49.71 C
ATOM 8 O4' A A 180 73.185 99.146 17.438 1.00 47.94 O
ATOM 9 C3' A A 180 75.511 98.687 17.409 1.00 48.35 C
ATOM 10 O3' A A 180 75.912 99.027 18.737 1.00 48.92 O
ATOM 11 C2' A A 180 74.723 97.388 17.445 1.00 46.23 C
ATOM 12 O2' A A 180 75.332 96.425 18.270 1.00 47.49 O
ATOM 13 C1' A A 180 73.398 97.884 18.023 1.00 46.55 C
ATOM 14 N9 A A 180 72.209 97.072 17.768 1.00 47.88 N
ATOM 15 C8 A A 180 72.047 96.000 16.928 1.00 48.72 C
ATOM 16 N7 A A 180 70.836 95.502 16.935 1.00 48.17 N
ATOM 17 C5 A A 180 70.155 96.299 17.838 1.00 48.39 C
ATOM 18 C6 A A 180 68.827 96.294 18.280 1.00 50.37 C
ATOM 19 N6 A A 180 67.907 95.424 17.849 1.00 51.31 N
ATOM 20 N1 A A 180 68.464 97.227 19.187 1.00 51.91 N
ATOM 21 C2 A A 180 69.386 98.104 19.608 1.00 50.99 C
ATOM 22 N3 A A 180 70.661 98.212 19.261 1.00 49.86 N
ATOM 23 C4 A A 180 70.987 97.268 18.361 1.00 48.45 C
ATOM 24 P A A 181 77.116 100.064 18.978 1.00 48.74 P
ATOM 25 OP1 A A 181 76.845 100.712 20.281 1.00 48.60 O
ATOM 26 OP2 A A 181 77.289 100.900 17.765 1.00 49.07 O
ATOM 27 O5' A A 181 78.403 99.143 19.131 1.00 47.20 O
TER

ATOM 1 O3' U B 190 60.867 92.443 16.435 1.00 52.01 O
ATOM 2 P G B 191 60.713 93.392 15.149 1.00 52.22 P
ATOM 3 OP1 G B 191 59.399 94.086 15.280 1.00 49.38 O
ATOM 4 OP2 G B 191 61.006 92.591 13.928 1.00 50.89 O
ATOM 5 O5' G B 191 61.862 94.477 15.343 1.00 51.22 O
ATOM 6 C5' G B 191 61.966 95.219 16.569 1.00 50.04 C
ATOM 7 C4' G B 191 63.353 95.796 16.726 1.00 49.69 C
ATOM 8 O4' G B 191 64.324 94.714 16.659 1.00 47.08 O
ATOM 9 C3' G B 191 63.781 96.819 15.677 1.00 50.19 C
ATOM 10 O3' G B 191 64.628 97.793 16.292 1.00 52.83 O
ATOM 11 C2' G B 191 64.566 95.962 14.688 1.00 49.00 C
ATOM 12 O2' G B 191 65.526 96.675 13.938 1.00 49.51 O
ATOM 13 C1' G B 191 65.247 94.965 15.621 1.00 46.65 C
ATOM 14 N9 G B 191 65.538 93.699 14.959 1.00 45.68 N
ATOM 15 C8 G B 191 64.630 92.827 14.405 1.00 46.04 C
ATOM 16 N7 G B 191 65.190 91.784 13.857 1.00 45.59 N
ATOM 17 C5 G B 191 66.550 91.974 14.065 1.00 43.69 C
ATOM 18 C6 G B 191 67.659 91.172 13.687 1.00 42.79 C
ATOM 19 O6 G B 191 67.662 90.096 13.061 1.00 40.77 O
ATOM 20 N1 G B 191 68.859 91.735 14.112 1.00 42.51 N
ATOM 21 C2 G B 191 68.980 92.911 14.808 1.00 42.22 C
ATOM 22 N2 G B 191 70.223 93.277 15.137 1.00 42.65 N
ATOM 23 N3 G B 191 67.958 93.670 15.158 1.00 42.86 N
ATOM 24 C4 G B 191 66.781 93.146 14.756 1.00 44.41 C
ATOM 25 P A B 192 64.202 99.348 16.293 1.00 52.87 P
ATOM 26 OP1 A B 192 62.901 99.482 16.996 1.00 54.04 O
ATOM 27 OP2 A B 192 64.358 99.914 14.925 1.00 55.18 O
ATOM 28 O5' A B 192 65.298 100.029 17.214 1.00 51.11 O
TER

Atoms:
OP1: (74.086,101.849,13.159)
OP2: (72.483,99.864,12.800)
C3': (75.511,98.687,17.409)
C1': (73.398,97.884,18.023)
C5': (74.378,99.883,15.459)
O4': (73.185,99.146,17.438)
C8: (72.047,96.000,16.928)
O2': (75.332,96.425,18.270)
C6: (68.827,96.294,18.280)
C5: (70.155,96.299,17.838)
C4: (70.987,97.268,18.361)
P: (72.910,101.046,13.603)
C4': (74.447,99.676,16.955)
C2': (74.723,97.388,17.445)
C2: (69.386,98.104,19.608)
N1: (68.464,97.227,19.187)
N3: (70.661,98.212,19.261)
N6: (67.907,95.424,17.849)
N7: (70.836,95.502,16.935)
N9: (72.209,97.072,17.768)
O5': (73.183,100.602,15.108)
O3': (75.912,99.027,18.737)
OP1: (59.399,94.086,15.280)
OP2: (61.006,92.591,13.928)
C3': (63.781,96.819,15.677)
C1': (65.247,94.965,15.621)
C5': (61.966,95.219,16.569)
O6: (67.662,90.096,13.061)
O4': (64.324,94.714,16.659)
C8: (64.630,92.827,14.405)
C2: (68.980,92.911,14.808)
C6: (67.659,91.172,13.687)
C5: (66.550,91.974,14.065)
C4: (66.781,93.146,14.756)
P: (60.713,93.392,15.149)
C4': (63.353,95.796,16.726)
C2': (64.566,95.962,14.688)
O2': (65.526,96.675,13.938)
N1: (68.859,91.735,14.112)
N2: (70.223,93.277,15.137)
N3: (67.958,93.670,15.158)
N7: (65.190,91.784,13.857)
N9: (65.538,93.699,14.959)
O5': (61.862,94.477,15.343)
O3': (64.628,97.793,16.292)
Image (generated by PyMOL):
PyMOL image
show in jmol