ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A474:A470

Extra

PDB:
ATOM 1 O3' A A 473 24.703 162.074 48.996 1.00 54.34 O
ATOM 2 P A A 474 23.967 162.985 47.891 1.00 54.74 P
ATOM 3 OP1 A A 474 23.881 162.257 46.605 1.00 53.78 O
ATOM 4 OP2 A A 474 24.557 164.353 47.930 1.00 54.83 O
ATOM 5 O5' A A 474 22.499 163.109 48.479 1.00 53.08 O
ATOM 6 C5' A A 474 21.736 161.943 48.806 1.00 51.73 C
ATOM 7 C4' A A 474 20.603 162.330 49.715 1.00 53.02 C
ATOM 8 O4' A A 474 19.500 161.395 49.612 1.00 54.14 O
ATOM 9 C3' A A 474 20.962 162.420 51.186 1.00 52.83 C
ATOM 10 O3' A A 474 21.450 163.730 51.477 1.00 53.66 O
ATOM 11 C2' A A 474 19.633 162.099 51.864 1.00 53.11 C
ATOM 12 O2' A A 474 18.743 163.190 51.941 1.00 54.79 O
ATOM 13 C1' A A 474 19.044 161.059 50.905 1.00 53.61 C
ATOM 14 N9 A A 474 19.574 159.741 51.211 1.00 54.18 N
ATOM 15 C8 A A 474 20.523 159.028 50.513 1.00 54.46 C
ATOM 16 N7 A A 474 20.887 157.922 51.099 1.00 53.21 N
ATOM 17 C5 A A 474 20.107 157.889 52.244 1.00 54.21 C
ATOM 18 C6 A A 474 20.044 156.991 53.297 1.00 54.53 C
ATOM 19 N6 A A 474 20.836 155.926 53.392 1.00 54.45 N
ATOM 20 N1 A A 474 19.144 157.232 54.281 1.00 54.84 N
ATOM 21 C2 A A 474 18.383 158.332 54.203 1.00 54.53 C
ATOM 22 N3 A A 474 18.369 159.270 53.272 1.00 54.05 N
ATOM 23 C4 A A 474 19.268 158.985 52.307 1.00 54.17 C
ATOM 24 P G A 475 22.158 164.043 52.890 1.00 55.21 P
ATOM 25 OP1 G A 475 21.729 163.015 53.878 1.00 54.53 O
ATOM 26 OP2 G A 475 21.990 165.471 53.212 1.00 55.37 O
ATOM 27 O5' G A 475 23.699 163.802 52.601 1.00 54.86 O
TER

ATOM 1 O3' U B 469 24.754 148.940 56.386 1.00 42.72 O
ATOM 2 P G B 470 24.054 148.014 55.301 1.00 44.33 P
ATOM 3 OP1 G B 470 23.182 147.070 56.027 1.00 42.87 O
ATOM 4 OP2 G B 470 25.105 147.496 54.374 1.00 42.76 O
ATOM 5 O5' G B 470 23.159 149.065 54.513 1.00 45.93 O
ATOM 6 C5' G B 470 22.035 149.673 55.150 1.00 47.90 C
ATOM 7 C4' G B 470 21.432 150.721 54.261 1.00 49.46 C
ATOM 8 O4' G B 470 22.372 151.806 54.098 1.00 49.92 O
ATOM 9 C3' G B 470 21.168 150.293 52.827 1.00 49.72 C
ATOM 10 O3' G B 470 20.019 149.485 52.676 1.00 48.77 O
ATOM 11 C2' G B 470 21.038 151.633 52.133 1.00 50.42 C
ATOM 12 O2' G B 470 19.805 152.296 52.345 1.00 52.80 O
ATOM 13 C1' G B 470 22.143 152.411 52.840 1.00 52.06 C
ATOM 14 N9 G B 470 23.349 152.345 52.029 1.00 54.30 N
ATOM 15 C8 G B 470 24.327 151.379 51.980 1.00 53.17 C
ATOM 16 N7 G B 470 25.241 151.629 51.083 1.00 53.88 N
ATOM 17 C5 G B 470 24.848 152.837 50.526 1.00 55.75 C
ATOM 18 C6 G B 470 25.437 153.621 49.512 1.00 56.71 C
ATOM 19 O6 G B 470 26.460 153.394 48.860 1.00 57.37 O
ATOM 20 N1 G B 470 24.703 154.785 49.276 1.00 58.12 N
ATOM 21 C2 G B 470 23.544 155.138 49.926 1.00 58.81 C
ATOM 22 N2 G B 470 22.988 156.300 49.599 1.00 58.87 N
ATOM 23 N3 G B 470 22.978 154.405 50.846 1.00 58.69 N
ATOM 24 C4 G B 470 23.684 153.283 51.104 1.00 56.47 C
ATOM 25 P C B 471 20.037 148.275 51.613 1.00 50.51 P
ATOM 26 OP1 C B 471 18.952 147.394 52.121 1.00 50.12 O
ATOM 27 OP2 C B 471 21.420 147.724 51.465 1.00 48.35 O
ATOM 28 O5' C B 471 19.605 148.994 50.251 1.00 51.32 O
TER

Atoms:
OP1: (23.881,162.257,46.605)
OP2: (24.557,164.353,47.930)
C3': (20.962,162.420,51.186)
C1': (19.044,161.059,50.905)
C5': (21.736,161.943,48.806)
O4': (19.500,161.395,49.612)
C8: (20.523,159.028,50.513)
O2': (18.743,163.190,51.941)
C6: (20.044,156.991,53.297)
C5: (20.107,157.889,52.244)
C4: (19.268,158.985,52.307)
P: (23.967,162.985,47.891)
C4': (20.603,162.330,49.715)
C2': (19.633,162.099,51.864)
C2: (18.383,158.332,54.203)
N1: (19.144,157.232,54.281)
N3: (18.369,159.270,53.272)
N6: (20.836,155.926,53.392)
N7: (20.887,157.922,51.099)
N9: (19.574,159.741,51.211)
O5': (22.499,163.109,48.479)
O3': (21.450,163.730,51.477)
OP1: (23.182,147.070,56.027)
OP2: (25.105,147.496,54.374)
C3': (21.168,150.293,52.827)
C1': (22.143,152.411,52.840)
C5': (22.035,149.673,55.150)
O6: (26.460,153.394,48.860)
O4': (22.372,151.806,54.098)
C8: (24.327,151.379,51.980)
C2: (23.544,155.138,49.926)
C6: (25.437,153.621,49.512)
C5: (24.848,152.837,50.526)
C4: (23.684,153.283,51.104)
P: (24.054,148.014,55.301)
C4': (21.432,150.721,54.261)
C2': (21.038,151.633,52.133)
O2': (19.805,152.296,52.345)
N1: (24.703,154.785,49.276)
N2: (22.988,156.300,49.599)
N3: (22.978,154.405,50.846)
N7: (25.241,151.629,51.083)
N9: (23.349,152.345,52.029)
O5': (23.159,149.065,54.513)
O3': (20.019,149.485,52.676)
Image (generated by PyMOL):
PyMOL image
show in jmol