Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0230:0257
Extra
PDB:
ATOM 1 O3' A A 229 89.412 111.399 6.875 1.00 37.83 O
ATOM 2 P A A 230 89.872 111.464 5.332 1.00 38.15 P
ATOM 3 OP1 A A 230 91.115 112.273 5.311 1.00 37.24 O
ATOM 4 OP2 A A 230 88.708 111.884 4.504 1.00 35.88 O
ATOM 5 O5' A A 230 90.230 109.949 4.980 1.00 36.16 O
ATOM 6 C5' A A 230 91.242 109.238 5.719 1.00 35.08 C
ATOM 7 C4' A A 230 91.220 107.762 5.374 1.00 36.65 C
ATOM 8 O4' A A 230 89.989 107.145 5.837 1.00 34.79 O
ATOM 9 C3' A A 230 91.266 107.402 3.898 1.00 37.01 C
ATOM 10 O3' A A 230 92.589 107.486 3.382 1.00 39.43 O
ATOM 11 C2' A A 230 90.739 105.973 3.905 1.00 35.52 C
ATOM 12 O2' A A 230 91.728 105.045 4.310 1.00 33.84 O
ATOM 13 C1' A A 230 89.648 106.064 4.977 1.00 33.74 C
ATOM 14 N9 A A 230 88.311 106.310 4.434 1.00 31.13 N
ATOM 15 C8 A A 230 87.739 107.520 4.127 1.00 30.91 C
ATOM 16 N7 A A 230 86.517 107.428 3.663 1.00 31.29 N
ATOM 17 C5 A A 230 86.263 106.065 3.660 1.00 30.83 C
ATOM 18 C6 A A 230 85.136 105.317 3.280 1.00 31.02 C
ATOM 19 N6 A A 230 84.005 105.864 2.812 1.00 31.85 N
ATOM 20 N1 A A 230 85.207 103.970 3.400 1.00 31.22 N
ATOM 21 C2 A A 230 86.340 103.426 3.876 1.00 29.81 C
ATOM 22 N3 A A 230 87.462 104.024 4.268 1.00 29.99 N
ATOM 23 C4 A A 230 87.360 105.361 4.133 1.00 32.17 C
ATOM 24 P A A 231 92.820 107.887 1.839 1.00 40.40 P
ATOM 25 OP1 A A 231 94.263 108.221 1.713 1.00 36.71 O
ATOM 26 OP2 A A 231 91.793 108.893 1.428 1.00 37.44 O
ATOM 27 O5' A A 231 92.524 106.529 1.053 1.00 38.59 O
TER
ATOM 1 O3' U B 256 80.116 108.095 -4.643 1.00 38.31 O
ATOM 2 P G B 257 78.835 107.706 -3.755 1.00 40.40 P
ATOM 3 OP1 G B 257 78.005 106.726 -4.514 1.00 39.74 O
ATOM 4 OP2 G B 257 78.215 108.968 -3.279 1.00 40.36 O
ATOM 5 O5' G B 257 79.474 106.955 -2.506 1.00 37.52 O
ATOM 6 C5' G B 257 80.281 105.780 -2.681 1.00 36.76 C
ATOM 7 C4' G B 257 80.866 105.370 -1.357 1.00 39.92 C
ATOM 8 O4' G B 257 81.899 106.317 -0.971 1.00 39.58 O
ATOM 9 C3' G B 257 79.865 105.380 -0.207 1.00 40.12 C
ATOM 10 O3' G B 257 79.142 104.152 -0.149 1.00 41.99 O
ATOM 11 C2' G B 257 80.751 105.635 1.005 1.00 38.99 C
ATOM 12 O2' G B 257 81.401 104.462 1.461 1.00 41.35 O
ATOM 13 C1' G B 257 81.792 106.599 0.416 1.00 38.58 C
ATOM 14 N9 G B 257 81.455 108.015 0.557 1.00 34.33 N
ATOM 15 C8 G B 257 80.386 108.674 -0.001 1.00 32.35 C
ATOM 16 N7 G B 257 80.350 109.940 0.305 1.00 31.22 N
ATOM 17 C5 G B 257 81.461 110.130 1.114 1.00 30.36 C
ATOM 18 C6 G B 257 81.935 111.297 1.754 1.00 29.84 C
ATOM 19 O6 G B 257 81.453 112.436 1.730 1.00 28.44 O
ATOM 20 N1 G B 257 83.090 111.045 2.483 1.00 27.74 N
ATOM 21 C2 G B 257 83.710 109.825 2.582 1.00 30.91 C
ATOM 22 N2 G B 257 84.819 109.776 3.331 1.00 30.15 N
ATOM 23 N3 G B 257 83.275 108.728 1.990 1.00 32.20 N
ATOM 24 C4 G B 257 82.153 108.953 1.278 1.00 31.21 C
ATOM 25 P U B 258 77.663 104.117 0.483 1.00 42.79 P
ATOM 26 OP1 U B 258 76.978 102.895 -0.007 1.00 44.87 O
ATOM 27 OP2 U B 258 77.016 105.439 0.289 1.00 41.80 O
ATOM 28 O5' U B 258 77.948 103.921 2.035 1.00 43.98 O
TER
ATOM 2 P A A 230 89.872 111.464 5.332 1.00 38.15 P
ATOM 3 OP1 A A 230 91.115 112.273 5.311 1.00 37.24 O
ATOM 4 OP2 A A 230 88.708 111.884 4.504 1.00 35.88 O
ATOM 5 O5' A A 230 90.230 109.949 4.980 1.00 36.16 O
ATOM 6 C5' A A 230 91.242 109.238 5.719 1.00 35.08 C
ATOM 7 C4' A A 230 91.220 107.762 5.374 1.00 36.65 C
ATOM 8 O4' A A 230 89.989 107.145 5.837 1.00 34.79 O
ATOM 9 C3' A A 230 91.266 107.402 3.898 1.00 37.01 C
ATOM 10 O3' A A 230 92.589 107.486 3.382 1.00 39.43 O
ATOM 11 C2' A A 230 90.739 105.973 3.905 1.00 35.52 C
ATOM 12 O2' A A 230 91.728 105.045 4.310 1.00 33.84 O
ATOM 13 C1' A A 230 89.648 106.064 4.977 1.00 33.74 C
ATOM 14 N9 A A 230 88.311 106.310 4.434 1.00 31.13 N
ATOM 15 C8 A A 230 87.739 107.520 4.127 1.00 30.91 C
ATOM 16 N7 A A 230 86.517 107.428 3.663 1.00 31.29 N
ATOM 17 C5 A A 230 86.263 106.065 3.660 1.00 30.83 C
ATOM 18 C6 A A 230 85.136 105.317 3.280 1.00 31.02 C
ATOM 19 N6 A A 230 84.005 105.864 2.812 1.00 31.85 N
ATOM 20 N1 A A 230 85.207 103.970 3.400 1.00 31.22 N
ATOM 21 C2 A A 230 86.340 103.426 3.876 1.00 29.81 C
ATOM 22 N3 A A 230 87.462 104.024 4.268 1.00 29.99 N
ATOM 23 C4 A A 230 87.360 105.361 4.133 1.00 32.17 C
ATOM 24 P A A 231 92.820 107.887 1.839 1.00 40.40 P
ATOM 25 OP1 A A 231 94.263 108.221 1.713 1.00 36.71 O
ATOM 26 OP2 A A 231 91.793 108.893 1.428 1.00 37.44 O
ATOM 27 O5' A A 231 92.524 106.529 1.053 1.00 38.59 O
TER
ATOM 1 O3' U B 256 80.116 108.095 -4.643 1.00 38.31 O
ATOM 2 P G B 257 78.835 107.706 -3.755 1.00 40.40 P
ATOM 3 OP1 G B 257 78.005 106.726 -4.514 1.00 39.74 O
ATOM 4 OP2 G B 257 78.215 108.968 -3.279 1.00 40.36 O
ATOM 5 O5' G B 257 79.474 106.955 -2.506 1.00 37.52 O
ATOM 6 C5' G B 257 80.281 105.780 -2.681 1.00 36.76 C
ATOM 7 C4' G B 257 80.866 105.370 -1.357 1.00 39.92 C
ATOM 8 O4' G B 257 81.899 106.317 -0.971 1.00 39.58 O
ATOM 9 C3' G B 257 79.865 105.380 -0.207 1.00 40.12 C
ATOM 10 O3' G B 257 79.142 104.152 -0.149 1.00 41.99 O
ATOM 11 C2' G B 257 80.751 105.635 1.005 1.00 38.99 C
ATOM 12 O2' G B 257 81.401 104.462 1.461 1.00 41.35 O
ATOM 13 C1' G B 257 81.792 106.599 0.416 1.00 38.58 C
ATOM 14 N9 G B 257 81.455 108.015 0.557 1.00 34.33 N
ATOM 15 C8 G B 257 80.386 108.674 -0.001 1.00 32.35 C
ATOM 16 N7 G B 257 80.350 109.940 0.305 1.00 31.22 N
ATOM 17 C5 G B 257 81.461 110.130 1.114 1.00 30.36 C
ATOM 18 C6 G B 257 81.935 111.297 1.754 1.00 29.84 C
ATOM 19 O6 G B 257 81.453 112.436 1.730 1.00 28.44 O
ATOM 20 N1 G B 257 83.090 111.045 2.483 1.00 27.74 N
ATOM 21 C2 G B 257 83.710 109.825 2.582 1.00 30.91 C
ATOM 22 N2 G B 257 84.819 109.776 3.331 1.00 30.15 N
ATOM 23 N3 G B 257 83.275 108.728 1.990 1.00 32.20 N
ATOM 24 C4 G B 257 82.153 108.953 1.278 1.00 31.21 C
ATOM 25 P U B 258 77.663 104.117 0.483 1.00 42.79 P
ATOM 26 OP1 U B 258 76.978 102.895 -0.007 1.00 44.87 O
ATOM 27 OP2 U B 258 77.016 105.439 0.289 1.00 41.80 O
ATOM 28 O5' U B 258 77.948 103.921 2.035 1.00 43.98 O
TER
Atoms:
OP1: (91.115,112.273,5.311)
OP2: (88.708,111.884,4.504)
C3': (91.266,107.402,3.898)
C1': (89.648,106.064,4.977)
C5': (91.242,109.238,5.719)
O4': (89.989,107.145,5.837)
C8: (87.739,107.520,4.127)
O2': (91.728,105.045,4.310)
C6: (85.136,105.317,3.280)
C5: (86.263,106.065,3.660)
C4: (87.360,105.361,4.133)
P: (89.872,111.464,5.332)
C4': (91.220,107.762,5.374)
C2': (90.739,105.973,3.905)
C2: (86.340,103.426,3.876)
N1: (85.207,103.970,3.400)
N3: (87.462,104.024,4.268)
N6: (84.005,105.864,2.812)
N7: (86.517,107.428,3.663)
N9: (88.311,106.310,4.434)
O5': (90.230,109.949,4.980)
O3': (92.589,107.486,3.382)
OP2: (88.708,111.884,4.504)
C3': (91.266,107.402,3.898)
C1': (89.648,106.064,4.977)
C5': (91.242,109.238,5.719)
O4': (89.989,107.145,5.837)
C8: (87.739,107.520,4.127)
O2': (91.728,105.045,4.310)
C6: (85.136,105.317,3.280)
C5: (86.263,106.065,3.660)
C4: (87.360,105.361,4.133)
P: (89.872,111.464,5.332)
C4': (91.220,107.762,5.374)
C2': (90.739,105.973,3.905)
C2: (86.340,103.426,3.876)
N1: (85.207,103.970,3.400)
N3: (87.462,104.024,4.268)
N6: (84.005,105.864,2.812)
N7: (86.517,107.428,3.663)
N9: (88.311,106.310,4.434)
O5': (90.230,109.949,4.980)
O3': (92.589,107.486,3.382)
OP1: (78.005,106.726,-4.514)
OP2: (78.215,108.968,-3.279)
C3': (79.865,105.380,-0.207)
C1': (81.792,106.599,0.416)
C5': (80.281,105.780,-2.681)
O6: (81.453,112.436,1.730)
O4': (81.899,106.317,-0.971)
C8: (80.386,108.674,-0.001)
C2: (83.710,109.825,2.582)
C6: (81.935,111.297,1.754)
C5: (81.461,110.130,1.114)
C4: (82.153,108.953,1.278)
P: (78.835,107.706,-3.755)
C4': (80.866,105.370,-1.357)
C2': (80.751,105.635,1.005)
O2': (81.401,104.462,1.461)
N1: (83.090,111.045,2.483)
N2: (84.819,109.776,3.331)
N3: (83.275,108.728,1.990)
N7: (80.350,109.940,0.305)
N9: (81.455,108.015,0.557)
O5': (79.474,106.955,-2.506)
O3': (79.142,104.152,-0.149)
OP2: (78.215,108.968,-3.279)
C3': (79.865,105.380,-0.207)
C1': (81.792,106.599,0.416)
C5': (80.281,105.780,-2.681)
O6: (81.453,112.436,1.730)
O4': (81.899,106.317,-0.971)
C8: (80.386,108.674,-0.001)
C2: (83.710,109.825,2.582)
C6: (81.935,111.297,1.754)
C5: (81.461,110.130,1.114)
C4: (82.153,108.953,1.278)
P: (78.835,107.706,-3.755)
C4': (80.866,105.370,-1.357)
C2': (80.751,105.635,1.005)
O2': (81.401,104.462,1.461)
N1: (83.090,111.045,2.483)
N2: (84.819,109.776,3.331)
N3: (83.275,108.728,1.990)
N7: (80.350,109.940,0.305)
N9: (81.455,108.015,0.557)
O5': (79.474,106.955,-2.506)
O3': (79.142,104.152,-0.149)
Image (generated by PyMOL):