ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:0230:0257

Extra

PDB:
ATOM 1 O3' A A 229 89.656 111.824 7.225 1.00 55.59 O
ATOM 2 P A A 230 90.109 111.921 5.688 1.00 54.61 P
ATOM 3 OP1 A A 230 91.377 112.710 5.657 1.00 53.16 O
ATOM 4 OP2 A A 230 88.926 112.367 4.889 1.00 51.69 O
ATOM 5 O5' A A 230 90.463 110.417 5.315 1.00 51.31 O
ATOM 6 C5' A A 230 91.558 109.751 5.964 1.00 50.04 C
ATOM 7 C4' A A 230 91.506 108.268 5.692 1.00 50.13 C
ATOM 8 O4' A A 230 90.229 107.748 6.134 1.00 49.29 O
ATOM 9 C3' A A 230 91.532 107.850 4.237 1.00 51.68 C
ATOM 10 O3' A A 230 92.841 107.900 3.699 1.00 54.90 O
ATOM 11 C2' A A 230 90.985 106.434 4.318 1.00 49.45 C
ATOM 12 O2' A A 230 91.941 105.529 4.840 1.00 48.28 O
ATOM 13 C1' A A 230 89.879 106.619 5.352 1.00 47.56 C
ATOM 14 N9 A A 230 88.544 106.843 4.797 1.00 45.17 N
ATOM 15 C8 A A 230 87.929 108.035 4.501 1.00 44.57 C
ATOM 16 N7 A A 230 86.694 107.902 4.071 1.00 42.92 N
ATOM 17 C5 A A 230 86.488 106.532 4.072 1.00 42.58 C
ATOM 18 C6 A A 230 85.374 105.744 3.734 1.00 42.19 C
ATOM 19 N6 A A 230 84.217 106.247 3.298 1.00 41.53 N
ATOM 20 N1 A A 230 85.492 104.404 3.856 1.00 42.42 N
ATOM 21 C2 A A 230 86.665 103.898 4.281 1.00 44.83 C
ATOM 22 N3 A A 230 87.787 104.536 4.624 1.00 43.24 N
ATOM 23 C4 A A 230 87.627 105.865 4.500 1.00 44.13 C
ATOM 24 P A A 231 93.042 108.261 2.146 1.00 57.04 P
ATOM 25 OP1 A A 231 94.508 108.534 2.001 1.00 56.72 O
ATOM 26 OP2 A A 231 92.040 109.282 1.699 1.00 52.38 O
ATOM 27 O5' A A 231 92.684 106.900 1.399 1.00 57.05 O
TER

ATOM 1 O3' U B 256 80.341 108.544 -4.358 1.00 58.19 O
ATOM 2 P G B 257 79.062 108.165 -3.469 1.00 58.82 P
ATOM 3 OP1 G B 257 78.204 107.209 -4.210 1.00 58.78 O
ATOM 4 OP2 G B 257 78.482 109.435 -2.971 1.00 60.33 O
ATOM 5 O5' G B 257 79.679 107.390 -2.229 1.00 59.04 O
ATOM 6 C5' G B 257 80.446 106.193 -2.404 1.00 57.98 C
ATOM 7 C4' G B 257 81.090 105.826 -1.094 1.00 59.41 C
ATOM 8 O4' G B 257 82.080 106.835 -0.751 1.00 59.17 O
ATOM 9 C3' G B 257 80.122 105.829 0.079 1.00 58.40 C
ATOM 10 O3' G B 257 79.431 104.590 0.165 1.00 60.34 O
ATOM 11 C2' G B 257 81.037 106.105 1.265 1.00 57.85 C
ATOM 12 O2' G B 257 81.727 104.950 1.706 1.00 58.56 O
ATOM 13 C1' G B 257 82.037 107.091 0.645 1.00 56.17 C
ATOM 14 N9 G B 257 81.679 108.494 0.827 1.00 50.66 N
ATOM 15 C8 G B 257 80.599 109.149 0.284 1.00 48.84 C
ATOM 16 N7 G B 257 80.533 110.404 0.637 1.00 47.38 N
ATOM 17 C5 G B 257 81.638 110.589 1.458 1.00 45.06 C
ATOM 18 C6 G B 257 82.084 111.740 2.143 1.00 44.05 C
ATOM 19 O6 G B 257 81.575 112.869 2.168 1.00 43.42 O
ATOM 20 N1 G B 257 83.247 111.484 2.863 1.00 42.30 N
ATOM 21 C2 G B 257 83.890 110.275 2.920 1.00 41.64 C
ATOM 22 N2 G B 257 84.993 110.221 3.679 1.00 40.68 N
ATOM 23 N3 G B 257 83.482 109.196 2.285 1.00 43.76 N
ATOM 24 C4 G B 257 82.358 109.422 1.580 1.00 46.33 C
ATOM 25 P U B 258 77.955 104.543 0.802 1.00 62.59 P
ATOM 26 OP1 U B 258 77.255 103.341 0.266 1.00 61.94 O
ATOM 27 OP2 U B 258 77.333 105.888 0.639 1.00 62.10 O
ATOM 28 O5' U B 258 78.244 104.319 2.354 1.00 62.76 O
TER

Atoms:
OP1: (91.377,112.710,5.657)
OP2: (88.926,112.367,4.889)
C3': (91.532,107.850,4.237)
C1': (89.879,106.619,5.352)
C5': (91.558,109.751,5.964)
O4': (90.229,107.748,6.134)
C8: (87.929,108.035,4.501)
O2': (91.941,105.529,4.840)
C6: (85.374,105.744,3.734)
C5: (86.488,106.532,4.072)
C4: (87.627,105.865,4.500)
P: (90.109,111.921,5.688)
C4': (91.506,108.268,5.692)
C2': (90.985,106.434,4.318)
C2: (86.665,103.898,4.281)
N1: (85.492,104.404,3.856)
N3: (87.787,104.536,4.624)
N6: (84.217,106.247,3.298)
N7: (86.694,107.902,4.071)
N9: (88.544,106.843,4.797)
O5': (90.463,110.417,5.315)
O3': (92.841,107.900,3.699)
OP1: (78.204,107.209,-4.210)
OP2: (78.482,109.435,-2.971)
C3': (80.122,105.829,0.079)
C1': (82.037,107.091,0.645)
C5': (80.446,106.193,-2.404)
O6: (81.575,112.869,2.168)
O4': (82.080,106.835,-0.751)
C8: (80.599,109.149,0.284)
C2: (83.890,110.275,2.920)
C6: (82.084,111.740,2.143)
C5: (81.638,110.589,1.458)
C4: (82.358,109.422,1.580)
P: (79.062,108.165,-3.469)
C4': (81.090,105.826,-1.094)
C2': (81.037,106.105,1.265)
O2': (81.727,104.950,1.706)
N1: (83.247,111.484,2.863)
N2: (84.993,110.221,3.679)
N3: (83.482,109.196,2.285)
N7: (80.533,110.404,0.637)
N9: (81.679,108.494,0.827)
O5': (79.679,107.390,-2.229)
O3': (79.431,104.590,0.165)
Image (generated by PyMOL):
PyMOL image
show in jmol