ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:015:0506

Extra

PDB:
ATOM 1 O3' G A 14 34.534 138.898 67.189 1.00 21.82 O
ATOM 2 P A A 15 34.942 138.137 65.842 1.00 20.83 P
ATOM 3 OP1 A A 15 36.400 137.912 65.846 1.00 19.92 O
ATOM 4 OP2 A A 15 34.323 138.858 64.722 1.00 21.44 O
ATOM 5 O5' A A 15 34.230 136.722 66.003 1.00 19.69 O
ATOM 6 C5' A A 15 34.742 135.751 66.930 1.00 18.52 C
ATOM 7 C4' A A 15 33.616 135.103 67.695 1.00 19.76 C
ATOM 8 O4' A A 15 32.897 136.103 68.459 1.00 21.92 O
ATOM 9 C3' A A 15 32.536 134.455 66.860 1.00 19.60 C
ATOM 10 O3' A A 15 32.947 133.179 66.398 1.00 21.11 O
ATOM 11 C2' A A 15 31.380 134.392 67.846 1.00 20.96 C
ATOM 12 O2' A A 15 31.523 133.388 68.820 1.00 21.97 O
ATOM 13 C1' A A 15 31.532 135.731 68.562 1.00 24.17 C
ATOM 14 N9 A A 15 30.710 136.781 67.959 1.00 29.86 N
ATOM 15 C8 A A 15 31.131 137.904 67.284 1.00 32.37 C
ATOM 16 N7 A A 15 30.150 138.661 66.854 1.00 33.21 N
ATOM 17 C5 A A 15 29.006 137.996 67.274 1.00 32.35 C
ATOM 18 C6 A A 15 27.642 138.283 67.125 1.00 33.08 C
ATOM 19 N6 A A 15 27.177 139.367 66.486 1.00 32.70 N
ATOM 20 N1 A A 15 26.756 137.409 67.657 1.00 33.30 N
ATOM 21 C2 A A 15 27.222 136.326 68.289 1.00 32.06 C
ATOM 22 N3 A A 15 28.479 135.949 68.494 1.00 32.14 N
ATOM 23 C4 A A 15 29.334 136.837 67.955 1.00 31.51 C
ATOM 24 P U A 16 32.491 132.670 64.939 1.00 22.27 P
ATOM 25 OP1 U A 16 32.872 131.236 64.824 1.00 19.02 O
ATOM 26 OP2 U A 16 32.972 133.637 63.915 1.00 21.03 O
ATOM 27 O5' U A 16 30.906 132.758 65.016 1.00 19.42 O
TER

ATOM 1 O3' U B 505 21.164 141.516 64.844 1.00 24.81 O
ATOM 2 P G B 506 20.862 142.232 66.245 1.00 26.81 P
ATOM 3 OP1 G B 506 19.730 141.501 66.867 1.00 24.67 O
ATOM 4 OP2 G B 506 20.771 143.699 66.036 1.00 25.19 O
ATOM 5 O5' G B 506 22.166 141.925 67.097 1.00 28.03 O
ATOM 6 C5' G B 506 22.685 140.590 67.160 1.00 28.91 C
ATOM 7 C4' G B 506 24.044 140.584 67.808 1.00 29.11 C
ATOM 8 O4' G B 506 25.028 141.185 66.913 1.00 28.62 O
ATOM 9 C3' G B 506 24.145 141.350 69.125 1.00 28.24 C
ATOM 10 O3' G B 506 25.015 140.645 69.989 1.00 29.00 O
ATOM 11 C2' G B 506 24.824 142.644 68.702 1.00 27.07 C
ATOM 12 O2' G B 506 25.513 143.275 69.759 1.00 27.16 O
ATOM 13 C1' G B 506 25.786 142.114 67.644 1.00 26.52 C
ATOM 14 N9 G B 506 26.352 143.106 66.742 1.00 25.11 N
ATOM 15 C8 G B 506 25.783 144.283 66.325 1.00 26.32 C
ATOM 16 N7 G B 506 26.599 145.027 65.631 1.00 26.18 N
ATOM 17 C5 G B 506 27.765 144.283 65.563 1.00 25.35 C
ATOM 18 C6 G B 506 29.014 144.589 64.975 1.00 24.28 C
ATOM 19 O6 G B 506 29.358 145.626 64.399 1.00 22.33 O
ATOM 20 N1 G B 506 29.918 143.543 65.127 1.00 24.46 N
ATOM 21 C2 G B 506 29.658 142.362 65.775 1.00 24.99 C
ATOM 22 N2 G B 506 30.660 141.483 65.828 1.00 25.02 N
ATOM 23 N3 G B 506 28.501 142.070 66.337 1.00 25.73 N
ATOM 24 C4 G B 506 27.610 143.072 66.202 1.00 25.61 C
ATOM 25 P A B 507 24.805 140.732 71.571 1.00 30.27 P
ATOM 26 OP1 A B 507 23.374 140.981 71.881 1.00 29.92 O
ATOM 27 OP2 A B 507 25.838 141.666 72.081 1.00 29.11 O
ATOM 28 O5' A B 507 25.124 139.251 72.047 1.00 30.78 O
TER

Atoms:
OP1: (36.400,137.912,65.846)
OP2: (34.323,138.858,64.722)
C3': (32.536,134.455,66.860)
C1': (31.532,135.731,68.562)
C5': (34.742,135.751,66.930)
O4': (32.897,136.103,68.459)
C8: (31.131,137.904,67.284)
O2': (31.523,133.388,68.820)
C6: (27.642,138.283,67.125)
C5: (29.006,137.996,67.274)
C4: (29.334,136.837,67.955)
P: (34.942,138.137,65.842)
C4': (33.616,135.103,67.695)
C2': (31.380,134.392,67.846)
C2: (27.222,136.326,68.289)
N1: (26.756,137.409,67.657)
N3: (28.479,135.949,68.494)
N6: (27.177,139.367,66.486)
N7: (30.150,138.661,66.854)
N9: (30.710,136.781,67.959)
O5': (34.230,136.722,66.003)
O3': (32.947,133.179,66.398)
OP1: (19.730,141.501,66.867)
OP2: (20.771,143.699,66.036)
C3': (24.145,141.350,69.125)
C1': (25.786,142.114,67.644)
C5': (22.685,140.590,67.160)
O6: (29.358,145.626,64.399)
O4': (25.028,141.185,66.913)
C8: (25.783,144.283,66.325)
C2: (29.658,142.362,65.775)
C6: (29.014,144.589,64.975)
C5: (27.765,144.283,65.563)
C4: (27.610,143.072,66.202)
P: (20.862,142.232,66.245)
C4': (24.044,140.584,67.808)
C2': (24.824,142.644,68.702)
O2': (25.513,143.275,69.759)
N1: (29.918,143.543,65.127)
N2: (30.660,141.483,65.828)
N3: (28.501,142.070,66.337)
N7: (26.599,145.027,65.631)
N9: (26.352,143.106,66.742)
O5': (22.166,141.925,67.097)
O3': (25.015,140.645,69.989)
Image (generated by PyMOL):
PyMOL image
show in jmol