Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A319:A333
Extra
PDB:
ATOM 1 O3' C A 318 18.388 124.888 32.278 1.00 53.96 O
ATOM 2 P A A 319 19.903 124.328 32.392 1.00 53.70 P
ATOM 3 OP1 A A 319 20.604 124.221 31.079 1.00 53.65 O
ATOM 4 OP2 A A 319 19.813 123.138 33.255 1.00 53.05 O
ATOM 5 O5' A A 319 20.649 125.481 33.191 1.00 53.23 O
ATOM 6 C5' A A 319 21.452 126.422 32.487 1.00 50.93 C
ATOM 7 C4' A A 319 22.886 126.284 32.914 1.00 50.83 C
ATOM 8 O4' A A 319 23.760 126.622 31.805 1.00 51.60 O
ATOM 9 C3' A A 319 23.314 127.212 34.038 1.00 50.93 C
ATOM 10 O3' A A 319 23.047 126.724 35.341 1.00 50.03 O
ATOM 11 C2' A A 319 24.806 127.265 33.821 1.00 51.85 C
ATOM 12 O2' A A 319 25.349 126.066 34.347 1.00 51.66 O
ATOM 13 C1' A A 319 24.870 127.361 32.286 1.00 52.62 C
ATOM 14 N9 A A 319 24.708 128.751 31.830 1.00 53.50 N
ATOM 15 C8 A A 319 23.552 129.384 31.414 1.00 53.87 C
ATOM 16 N7 A A 319 23.706 130.667 31.180 1.00 53.58 N
ATOM 17 C5 A A 319 25.055 130.894 31.436 1.00 52.91 C
ATOM 18 C6 A A 319 25.850 132.059 31.413 1.00 52.06 C
ATOM 19 N6 A A 319 25.391 133.286 31.136 1.00 50.59 N
ATOM 20 N1 A A 319 27.155 131.925 31.710 1.00 52.63 N
ATOM 21 C2 A A 319 27.624 130.712 32.019 1.00 53.54 C
ATOM 22 N3 A A 319 26.983 129.552 32.094 1.00 52.99 N
ATOM 23 C4 A A 319 25.689 129.714 31.797 1.00 53.08 C
ATOM 24 P G A 320 22.660 127.757 36.502 1.00 49.37 P
ATOM 25 OP1 G A 320 22.663 126.981 37.759 1.00 49.37 O
ATOM 26 OP2 G A 320 21.405 128.428 36.049 1.00 49.66 O
ATOM 27 O5' G A 320 23.829 128.854 36.513 1.00 49.92 O
TER
ATOM 1 O3' C B 332 26.385 141.540 27.421 1.00 56.03 O
ATOM 2 P G B 333 26.399 140.767 26.022 1.00 58.05 P
ATOM 3 OP1 G B 333 27.751 140.956 25.425 1.00 57.01 O
ATOM 4 OP2 G B 333 25.196 141.239 25.295 1.00 59.31 O
ATOM 5 O5' G B 333 26.199 139.228 26.413 1.00 57.28 O
ATOM 6 C5' G B 333 27.341 138.368 26.668 1.00 56.90 C
ATOM 7 C4' G B 333 26.997 137.277 27.671 1.00 56.97 C
ATOM 8 O4' G B 333 25.829 137.651 28.450 1.00 58.24 O
ATOM 9 C3' G B 333 26.684 135.872 27.171 1.00 55.50 C
ATOM 10 O3' G B 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 11 C2' G B 333 25.967 135.290 28.376 1.00 56.30 C
ATOM 12 O2' G B 333 26.914 135.009 29.391 1.00 54.93 O
ATOM 13 C1' G B 333 25.129 136.484 28.844 1.00 58.29 C
ATOM 14 N9 G B 333 23.770 136.555 28.302 1.00 60.39 N
ATOM 15 C8 G B 333 23.225 137.596 27.587 1.00 61.03 C
ATOM 16 N7 G B 333 21.978 137.398 27.256 1.00 61.10 N
ATOM 17 C5 G B 333 21.677 136.150 27.777 1.00 61.74 C
ATOM 18 C6 G B 333 20.467 135.409 27.737 1.00 62.39 C
ATOM 19 O6 G B 333 19.391 135.718 27.209 1.00 63.65 O
ATOM 20 N1 G B 333 20.590 134.194 28.398 1.00 62.33 N
ATOM 21 C2 G B 333 21.732 133.746 29.017 1.00 61.99 C
ATOM 22 N2 G B 333 21.645 132.548 29.628 1.00 62.25 N
ATOM 23 N3 G B 333 22.874 134.422 29.046 1.00 62.22 N
ATOM 24 C4 G B 333 22.773 135.609 28.419 1.00 61.14 C
ATOM 25 P U B 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 26 OP1 U B 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 27 OP2 U B 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 28 O5' U B 334 26.855 132.896 26.294 1.00 56.04 O
TER
ATOM 2 P A A 319 19.903 124.328 32.392 1.00 53.70 P
ATOM 3 OP1 A A 319 20.604 124.221 31.079 1.00 53.65 O
ATOM 4 OP2 A A 319 19.813 123.138 33.255 1.00 53.05 O
ATOM 5 O5' A A 319 20.649 125.481 33.191 1.00 53.23 O
ATOM 6 C5' A A 319 21.452 126.422 32.487 1.00 50.93 C
ATOM 7 C4' A A 319 22.886 126.284 32.914 1.00 50.83 C
ATOM 8 O4' A A 319 23.760 126.622 31.805 1.00 51.60 O
ATOM 9 C3' A A 319 23.314 127.212 34.038 1.00 50.93 C
ATOM 10 O3' A A 319 23.047 126.724 35.341 1.00 50.03 O
ATOM 11 C2' A A 319 24.806 127.265 33.821 1.00 51.85 C
ATOM 12 O2' A A 319 25.349 126.066 34.347 1.00 51.66 O
ATOM 13 C1' A A 319 24.870 127.361 32.286 1.00 52.62 C
ATOM 14 N9 A A 319 24.708 128.751 31.830 1.00 53.50 N
ATOM 15 C8 A A 319 23.552 129.384 31.414 1.00 53.87 C
ATOM 16 N7 A A 319 23.706 130.667 31.180 1.00 53.58 N
ATOM 17 C5 A A 319 25.055 130.894 31.436 1.00 52.91 C
ATOM 18 C6 A A 319 25.850 132.059 31.413 1.00 52.06 C
ATOM 19 N6 A A 319 25.391 133.286 31.136 1.00 50.59 N
ATOM 20 N1 A A 319 27.155 131.925 31.710 1.00 52.63 N
ATOM 21 C2 A A 319 27.624 130.712 32.019 1.00 53.54 C
ATOM 22 N3 A A 319 26.983 129.552 32.094 1.00 52.99 N
ATOM 23 C4 A A 319 25.689 129.714 31.797 1.00 53.08 C
ATOM 24 P G A 320 22.660 127.757 36.502 1.00 49.37 P
ATOM 25 OP1 G A 320 22.663 126.981 37.759 1.00 49.37 O
ATOM 26 OP2 G A 320 21.405 128.428 36.049 1.00 49.66 O
ATOM 27 O5' G A 320 23.829 128.854 36.513 1.00 49.92 O
TER
ATOM 1 O3' C B 332 26.385 141.540 27.421 1.00 56.03 O
ATOM 2 P G B 333 26.399 140.767 26.022 1.00 58.05 P
ATOM 3 OP1 G B 333 27.751 140.956 25.425 1.00 57.01 O
ATOM 4 OP2 G B 333 25.196 141.239 25.295 1.00 59.31 O
ATOM 5 O5' G B 333 26.199 139.228 26.413 1.00 57.28 O
ATOM 6 C5' G B 333 27.341 138.368 26.668 1.00 56.90 C
ATOM 7 C4' G B 333 26.997 137.277 27.671 1.00 56.97 C
ATOM 8 O4' G B 333 25.829 137.651 28.450 1.00 58.24 O
ATOM 9 C3' G B 333 26.684 135.872 27.171 1.00 55.50 C
ATOM 10 O3' G B 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 11 C2' G B 333 25.967 135.290 28.376 1.00 56.30 C
ATOM 12 O2' G B 333 26.914 135.009 29.391 1.00 54.93 O
ATOM 13 C1' G B 333 25.129 136.484 28.844 1.00 58.29 C
ATOM 14 N9 G B 333 23.770 136.555 28.302 1.00 60.39 N
ATOM 15 C8 G B 333 23.225 137.596 27.587 1.00 61.03 C
ATOM 16 N7 G B 333 21.978 137.398 27.256 1.00 61.10 N
ATOM 17 C5 G B 333 21.677 136.150 27.777 1.00 61.74 C
ATOM 18 C6 G B 333 20.467 135.409 27.737 1.00 62.39 C
ATOM 19 O6 G B 333 19.391 135.718 27.209 1.00 63.65 O
ATOM 20 N1 G B 333 20.590 134.194 28.398 1.00 62.33 N
ATOM 21 C2 G B 333 21.732 133.746 29.017 1.00 61.99 C
ATOM 22 N2 G B 333 21.645 132.548 29.628 1.00 62.25 N
ATOM 23 N3 G B 333 22.874 134.422 29.046 1.00 62.22 N
ATOM 24 C4 G B 333 22.773 135.609 28.419 1.00 61.14 C
ATOM 25 P U B 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 26 OP1 U B 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 27 OP2 U B 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 28 O5' U B 334 26.855 132.896 26.294 1.00 56.04 O
TER
Atoms:
OP1: (20.604,124.221,31.079)
OP2: (19.813,123.138,33.255)
C3': (23.314,127.212,34.038)
C1': (24.870,127.361,32.286)
C5': (21.452,126.422,32.487)
O4': (23.760,126.622,31.805)
C8: (23.552,129.384,31.414)
O2': (25.349,126.066,34.347)
C6: (25.850,132.059,31.413)
C5: (25.055,130.894,31.436)
C4: (25.689,129.714,31.797)
P: (19.903,124.328,32.392)
C4': (22.886,126.284,32.914)
C2': (24.806,127.265,33.821)
C2: (27.624,130.712,32.019)
N1: (27.155,131.925,31.710)
N3: (26.983,129.552,32.094)
N6: (25.391,133.286,31.136)
N7: (23.706,130.667,31.180)
N9: (24.708,128.751,31.830)
O5': (20.649,125.481,33.191)
O3': (23.047,126.724,35.341)
OP2: (19.813,123.138,33.255)
C3': (23.314,127.212,34.038)
C1': (24.870,127.361,32.286)
C5': (21.452,126.422,32.487)
O4': (23.760,126.622,31.805)
C8: (23.552,129.384,31.414)
O2': (25.349,126.066,34.347)
C6: (25.850,132.059,31.413)
C5: (25.055,130.894,31.436)
C4: (25.689,129.714,31.797)
P: (19.903,124.328,32.392)
C4': (22.886,126.284,32.914)
C2': (24.806,127.265,33.821)
C2: (27.624,130.712,32.019)
N1: (27.155,131.925,31.710)
N3: (26.983,129.552,32.094)
N6: (25.391,133.286,31.136)
N7: (23.706,130.667,31.180)
N9: (24.708,128.751,31.830)
O5': (20.649,125.481,33.191)
O3': (23.047,126.724,35.341)
OP1: (27.751,140.956,25.425)
OP2: (25.196,141.239,25.295)
C3': (26.684,135.872,27.171)
C1': (25.129,136.484,28.844)
C5': (27.341,138.368,26.668)
O6: (19.391,135.718,27.209)
O4': (25.829,137.651,28.450)
C8: (23.225,137.596,27.587)
C2: (21.732,133.746,29.017)
C6: (20.467,135.409,27.737)
C5: (21.677,136.150,27.777)
C4: (22.773,135.609,28.419)
P: (26.399,140.767,26.022)
C4': (26.997,137.277,27.671)
C2': (25.967,135.290,28.376)
O2': (26.914,135.009,29.391)
N1: (20.590,134.194,28.398)
N2: (21.645,132.548,29.628)
N3: (22.874,134.422,29.046)
N7: (21.978,137.398,27.256)
N9: (23.770,136.555,28.302)
O5': (26.199,139.228,26.413)
O3': (27.882,135.130,26.959)
OP2: (25.196,141.239,25.295)
C3': (26.684,135.872,27.171)
C1': (25.129,136.484,28.844)
C5': (27.341,138.368,26.668)
O6: (19.391,135.718,27.209)
O4': (25.829,137.651,28.450)
C8: (23.225,137.596,27.587)
C2: (21.732,133.746,29.017)
C6: (20.467,135.409,27.737)
C5: (21.677,136.150,27.777)
C4: (22.773,135.609,28.419)
P: (26.399,140.767,26.022)
C4': (26.997,137.277,27.671)
C2': (25.967,135.290,28.376)
O2': (26.914,135.009,29.391)
N1: (20.590,134.194,28.398)
N2: (21.645,132.548,29.628)
N3: (22.874,134.422,29.046)
N7: (21.978,137.398,27.256)
N9: (23.770,136.555,28.302)
O5': (26.199,139.228,26.413)
O3': (27.882,135.130,26.959)
Image (generated by PyMOL):