ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02745:02690

Extra

PDB:
ATOM 1 O3' A A2744 38.119 186.363 112.659 1.00 60.02 O
ATOM 2 P A A2745 36.635 186.062 113.189 1.00 59.51 P
ATOM 3 OP1 A A2745 35.981 185.093 112.266 1.00 60.14 O
ATOM 4 OP2 A A2745 35.992 187.371 113.454 1.00 59.36 O
ATOM 5 O5' A A2745 36.889 185.332 114.582 1.00 58.96 O
ATOM 6 C5' A A2745 35.799 184.906 115.413 1.00 58.90 C
ATOM 7 C4' A A2745 36.043 183.499 115.894 1.00 58.72 C
ATOM 8 O4' A A2745 37.247 183.448 116.703 1.00 57.88 O
ATOM 9 C3' A A2745 34.991 182.916 116.816 1.00 59.55 C
ATOM 10 O3' A A2745 33.876 182.432 116.086 1.00 62.42 O
ATOM 11 C2' A A2745 35.752 181.766 117.452 1.00 59.02 C
ATOM 12 O2' A A2745 35.878 180.670 116.572 1.00 60.54 O
ATOM 13 C1' A A2745 37.131 182.395 117.649 1.00 57.86 C
ATOM 14 N9 A A2745 37.292 182.936 118.997 1.00 56.41 N
ATOM 15 C8 A A2745 37.393 184.245 119.391 1.00 57.70 C
ATOM 16 N7 A A2745 37.517 184.398 120.686 1.00 57.91 N
ATOM 17 C5 A A2745 37.495 183.101 121.179 1.00 57.17 C
ATOM 18 C6 A A2745 37.574 182.580 122.486 1.00 56.87 C
ATOM 19 N6 A A2745 37.679 183.336 123.581 1.00 56.39 N
ATOM 20 N1 A A2745 37.536 181.238 122.631 1.00 56.30 N
ATOM 21 C2 A A2745 37.413 180.482 121.536 1.00 55.87 C
ATOM 22 N3 A A2745 37.315 180.853 120.262 1.00 56.47 N
ATOM 23 C4 A A2745 37.365 182.191 120.150 1.00 56.21 C
ATOM 24 P C A2746 32.410 182.506 116.731 1.00 64.48 P
ATOM 25 OP1 C A2746 32.515 182.976 118.141 1.00 63.19 O
ATOM 26 OP2 C A2746 31.728 181.225 116.433 1.00 62.43 O
ATOM 27 O5' C A2746 31.713 183.676 115.910 1.00 65.71 O
TER

ATOM 1 O3' C B2689 30.657 185.143 129.853 1.00 80.81 O
ATOM 2 P G B2690 32.211 185.481 130.112 1.00 79.31 P
ATOM 3 OP1 G B2690 32.640 184.689 131.298 1.00 77.77 O
ATOM 4 OP2 G B2690 32.389 186.959 130.108 1.00 78.47 O
ATOM 5 O5' G B2690 32.967 184.901 128.836 1.00 77.88 O
ATOM 6 C5' G B2690 33.104 183.482 128.627 1.00 73.42 C
ATOM 7 C4' G B2690 34.237 183.215 127.672 1.00 70.11 C
ATOM 8 O4' G B2690 34.032 184.031 126.489 1.00 69.99 O
ATOM 9 C3' G B2690 35.620 183.613 128.166 1.00 68.87 C
ATOM 10 O3' G B2690 36.197 182.562 128.944 1.00 65.91 O
ATOM 11 C2' G B2690 36.375 183.840 126.861 1.00 70.35 C
ATOM 12 O2' G B2690 36.803 182.628 126.270 1.00 71.98 O
ATOM 13 C1' G B2690 35.284 184.460 125.981 1.00 70.52 C
ATOM 14 N9 G B2690 35.289 185.920 125.942 1.00 70.24 N
ATOM 15 C8 G B2690 34.872 186.774 126.932 1.00 70.70 C
ATOM 16 N7 G B2690 34.994 188.033 126.608 1.00 70.61 N
ATOM 17 C5 G B2690 35.523 188.010 125.328 1.00 70.71 C
ATOM 18 C6 G B2690 35.874 189.076 124.463 1.00 70.87 C
ATOM 19 O6 G B2690 35.784 190.291 124.662 1.00 70.20 O
ATOM 20 N1 G B2690 36.379 188.609 123.257 1.00 71.86 N
ATOM 21 C2 G B2690 36.529 187.286 122.923 1.00 72.09 C
ATOM 22 N2 G B2690 37.038 187.041 121.706 1.00 72.78 N
ATOM 23 N3 G B2690 36.205 186.280 123.721 1.00 71.55 N
ATOM 24 C4 G B2690 35.712 186.713 124.900 1.00 70.88 C
ATOM 25 P A B2691 37.259 182.902 130.109 1.00 63.96 P
ATOM 26 OP1 A B2691 37.305 181.751 131.046 1.00 62.32 O
ATOM 27 OP2 A B2691 36.919 184.250 130.619 1.00 65.45 O
ATOM 28 O5' A B2691 38.675 182.988 129.374 1.00 63.90 O
TER

Atoms:
OP1: (35.981,185.093,112.266)
OP2: (35.992,187.371,113.454)
C3': (34.991,182.916,116.816)
C1': (37.131,182.395,117.649)
C5': (35.799,184.906,115.413)
O4': (37.247,183.448,116.703)
C8: (37.393,184.245,119.391)
O2': (35.878,180.670,116.572)
C6: (37.574,182.580,122.486)
C5: (37.495,183.101,121.179)
C4: (37.365,182.191,120.150)
P: (36.635,186.062,113.189)
C4': (36.043,183.499,115.894)
C2': (35.752,181.766,117.452)
C2: (37.413,180.482,121.536)
N1: (37.536,181.238,122.631)
N3: (37.315,180.853,120.262)
N6: (37.679,183.336,123.581)
N7: (37.517,184.398,120.686)
N9: (37.292,182.936,118.997)
O5': (36.889,185.332,114.582)
O3': (33.876,182.432,116.086)
OP1: (32.640,184.689,131.298)
OP2: (32.389,186.959,130.108)
C3': (35.620,183.613,128.166)
C1': (35.284,184.460,125.981)
C5': (33.104,183.482,128.627)
O6: (35.784,190.291,124.662)
O4': (34.032,184.031,126.489)
C8: (34.872,186.774,126.932)
C2: (36.529,187.286,122.923)
C6: (35.874,189.076,124.463)
C5: (35.523,188.010,125.328)
C4: (35.712,186.713,124.900)
P: (32.211,185.481,130.112)
C4': (34.237,183.215,127.672)
C2': (36.375,183.840,126.861)
O2': (36.803,182.628,126.270)
N1: (36.379,188.609,123.257)
N2: (37.038,187.041,121.706)
N3: (36.205,186.280,123.721)
N7: (34.994,188.033,126.608)
N9: (35.289,185.920,125.942)
O5': (32.967,184.901,128.836)
O3': (36.197,182.562,128.944)
Image (generated by PyMOL):
PyMOL image
show in jmol