ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC7:0578:0556

Extra

PDB:
ATOM 1 O3' U A 577 -11.712 94.204 107.387 1.00 59.70 O
ATOM 2 P A A 578 -11.276 95.520 106.584 1.00 60.28 P
ATOM 3 OP1 A A 578 -12.425 96.034 105.808 1.00 62.26 O
ATOM 4 OP2 A A 578 -10.016 95.181 105.880 1.00 62.69 O
ATOM 5 O5' A A 578 -10.973 96.570 107.741 1.00 59.27 O
ATOM 6 C5' A A 578 -12.043 97.166 108.486 1.00 58.01 C
ATOM 7 C4' A A 578 -11.503 98.218 109.419 1.00 58.55 C
ATOM 8 O4' A A 578 -10.705 97.584 110.453 1.00 59.09 O
ATOM 9 C3' A A 578 -10.532 99.196 108.789 1.00 59.11 C
ATOM 10 O3' A A 578 -11.156 100.215 108.035 1.00 61.12 O
ATOM 11 C2' A A 578 -9.766 99.716 109.996 1.00 58.81 C
ATOM 12 O2' A A 578 -10.460 100.695 110.747 1.00 57.00 O
ATOM 13 C1' A A 578 -9.616 98.431 110.805 1.00 57.17 C
ATOM 14 N9 A A 578 -8.375 97.738 110.468 1.00 55.10 N
ATOM 15 C8 A A 578 -8.220 96.617 109.693 1.00 53.59 C
ATOM 16 N7 A A 578 -6.978 96.220 109.586 1.00 53.47 N
ATOM 17 C5 A A 578 -6.268 97.142 110.339 1.00 53.14 C
ATOM 18 C6 A A 578 -4.905 97.265 110.635 1.00 53.12 C
ATOM 19 N6 A A 578 -3.977 96.412 110.196 1.00 53.91 N
ATOM 20 N1 A A 578 -4.520 98.301 111.412 1.00 51.71 N
ATOM 21 C2 A A 578 -5.455 99.145 111.860 1.00 52.57 C
ATOM 22 N3 A A 578 -6.771 99.128 111.657 1.00 53.50 N
ATOM 23 C4 A A 578 -7.115 98.088 110.879 1.00 53.51 C
ATOM 24 P A A 579 -10.534 100.616 106.614 1.00 60.74 P
ATOM 25 OP1 A A 579 -11.198 101.862 106.155 1.00 61.51 O
ATOM 26 OP2 A A 579 -10.565 99.396 105.755 1.00 59.34 O
ATOM 27 O5' A A 579 -9.020 100.966 106.965 1.00 59.53 O
TER

ATOM 1 O3' U B 555 4.402 93.238 108.386 1.00 39.33 O
ATOM 2 P G B 556 3.844 92.711 109.799 1.00 37.97 P
ATOM 3 OP1 G B 556 4.824 93.102 110.846 1.00 38.78 O
ATOM 4 OP2 G B 556 3.484 91.280 109.633 1.00 37.12 O
ATOM 5 O5' G B 556 2.519 93.561 110.034 1.00 36.50 O
ATOM 6 C5' G B 556 2.575 94.883 110.586 1.00 38.52 C
ATOM 7 C4' G B 556 1.176 95.418 110.798 1.00 42.77 C
ATOM 8 O4' G B 556 0.517 95.589 109.511 1.00 42.32 O
ATOM 9 C3' G B 556 0.223 94.509 111.562 1.00 43.92 C
ATOM 10 O3' G B 556 0.406 94.566 112.968 1.00 47.37 O
ATOM 11 C2' G B 556 -1.131 95.041 111.125 1.00 43.00 C
ATOM 12 O2' G B 556 -1.471 96.260 111.757 1.00 39.88 O
ATOM 13 C1' G B 556 -0.867 95.299 109.643 1.00 41.82 C
ATOM 14 N9 G B 556 -1.163 94.109 108.854 1.00 41.63 N
ATOM 15 C8 G B 556 -0.298 93.101 108.499 1.00 41.10 C
ATOM 16 N7 G B 556 -0.868 92.161 107.794 1.00 40.41 N
ATOM 17 C5 G B 556 -2.187 92.576 107.679 1.00 41.87 C
ATOM 18 C6 G B 556 -3.288 91.970 107.025 1.00 41.67 C
ATOM 19 O6 G B 556 -3.320 90.913 106.392 1.00 43.08 O
ATOM 20 N1 G B 556 -4.443 92.730 107.160 1.00 41.66 N
ATOM 21 C2 G B 556 -4.532 93.920 107.840 1.00 41.96 C
ATOM 22 N2 G B 556 -5.738 94.499 107.865 1.00 42.74 N
ATOM 23 N3 G B 556 -3.515 94.497 108.450 1.00 42.41 N
ATOM 24 C4 G B 556 -2.382 93.777 108.329 1.00 42.34 C
ATOM 25 P A B 557 -0.085 93.335 113.881 1.00 50.24 P
ATOM 26 OP1 A B 557 0.543 93.524 115.210 1.00 49.82 O
ATOM 27 OP2 A B 557 0.076 92.038 113.165 1.00 46.97 O
ATOM 28 O5' A B 557 -1.642 93.600 114.042 1.00 52.43 O
TER

Atoms:
OP1: (-12.425,96.034,105.808)
OP2: (-10.016,95.181,105.880)
C3': (-10.532,99.196,108.789)
C1': (-9.616,98.431,110.805)
C5': (-12.043,97.166,108.486)
O4': (-10.705,97.584,110.453)
C8: (-8.220,96.617,109.693)
O2': (-10.460,100.695,110.747)
C6: (-4.905,97.265,110.635)
C5: (-6.268,97.142,110.339)
C4: (-7.115,98.088,110.879)
P: (-11.276,95.520,106.584)
C4': (-11.503,98.218,109.419)
C2': (-9.766,99.716,109.996)
C2: (-5.455,99.145,111.860)
N1: (-4.520,98.301,111.412)
N3: (-6.771,99.128,111.657)
N6: (-3.977,96.412,110.196)
N7: (-6.978,96.220,109.586)
N9: (-8.375,97.738,110.468)
O5': (-10.973,96.570,107.741)
O3': (-11.156,100.215,108.035)
OP1: (4.824,93.102,110.846)
OP2: (3.484,91.280,109.633)
C3': (0.223,94.509,111.562)
C1': (-0.867,95.299,109.643)
C5': (2.575,94.883,110.586)
O6: (-3.320,90.913,106.392)
O4': (0.517,95.589,109.511)
C8: (-0.298,93.101,108.499)
C2: (-4.532,93.920,107.840)
C6: (-3.288,91.970,107.025)
C5: (-2.187,92.576,107.679)
C4: (-2.382,93.777,108.329)
P: (3.844,92.711,109.799)
C4': (1.176,95.418,110.798)
C2': (-1.131,95.041,111.125)
O2': (-1.471,96.260,111.757)
N1: (-4.443,92.730,107.160)
N2: (-5.738,94.499,107.865)
N3: (-3.515,94.497,108.450)
N7: (-0.868,92.161,107.794)
N9: (-1.163,94.109,108.854)
O5': (2.519,93.561,110.034)
O3': (0.406,94.566,112.968)
Image (generated by PyMOL):
PyMOL image
show in jmol