ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0165:0147

Extra

PDB:
ATOM 1 O3' U A 164 66.646 115.155 47.406 1.00 28.55 O
ATOM 2 P A A 165 66.994 116.666 46.992 1.00 31.46 P
ATOM 3 OP1 A A 165 65.713 117.338 46.610 1.00 28.30 O
ATOM 4 OP2 A A 165 68.120 116.629 46.022 1.00 30.53 O
ATOM 5 O5' A A 165 67.528 117.306 48.352 1.00 28.48 O
ATOM 6 C5' A A 165 66.628 117.575 49.435 1.00 27.60 C
ATOM 7 C4' A A 165 67.354 118.246 50.570 1.00 29.45 C
ATOM 8 O4' A A 165 68.352 117.343 51.108 1.00 30.84 O
ATOM 9 C3' A A 165 68.151 119.483 50.210 1.00 29.40 C
ATOM 10 O3' A A 165 67.327 120.633 50.108 1.00 29.03 O
ATOM 11 C2' A A 165 69.145 119.568 51.359 1.00 29.84 C
ATOM 12 O2' A A 165 68.573 120.112 52.529 1.00 29.79 O
ATOM 13 C1' A A 165 69.450 118.088 51.597 1.00 28.44 C
ATOM 14 N9 A A 165 70.663 117.584 50.958 1.00 27.37 N
ATOM 15 C8 A A 165 70.784 116.806 49.833 1.00 28.63 C
ATOM 16 N7 A A 165 72.019 116.447 49.567 1.00 28.06 N
ATOM 17 C5 A A 165 72.759 117.046 50.572 1.00 28.69 C
ATOM 18 C6 A A 165 74.127 117.039 50.864 1.00 29.91 C
ATOM 19 N6 A A 165 75.035 116.373 50.154 1.00 31.15 N
ATOM 20 N1 A A 165 74.540 117.747 51.932 1.00 31.02 N
ATOM 21 C2 A A 165 73.627 118.415 52.652 1.00 30.69 C
ATOM 22 N3 A A 165 72.314 118.492 52.483 1.00 26.51 N
ATOM 23 C4 A A 165 71.939 117.772 51.418 1.00 28.01 C
ATOM 24 P U A 166 67.607 121.693 48.940 1.00 29.93 P
ATOM 25 OP1 U A 166 66.702 122.846 49.157 1.00 27.76 O
ATOM 26 OP2 U A 166 67.584 120.987 47.644 1.00 28.52 O
ATOM 27 O5' U A 166 69.116 122.126 49.209 1.00 29.68 O
TER

ATOM 1 O3' A B 146 83.092 115.722 45.566 1.00 34.62 O
ATOM 2 P G B 147 82.881 114.320 46.313 1.00 35.24 P
ATOM 3 OP1 G B 147 84.061 114.089 47.193 1.00 34.60 O
ATOM 4 OP2 G B 147 82.506 113.307 45.298 1.00 37.08 O
ATOM 5 O5' G B 147 81.598 114.560 47.215 1.00 34.58 O
ATOM 6 C5' G B 147 81.638 115.469 48.314 1.00 32.41 C
ATOM 7 C4' G B 147 80.267 115.607 48.916 1.00 31.18 C
ATOM 8 O4' G B 147 79.350 116.116 47.913 1.00 31.22 O
ATOM 9 C3' G B 147 79.595 114.323 49.358 1.00 29.57 C
ATOM 10 O3' G B 147 80.077 113.843 50.596 1.00 29.35 O
ATOM 11 C2' G B 147 78.138 114.748 49.417 1.00 29.67 C
ATOM 12 O2' G B 147 77.817 115.517 50.555 1.00 29.11 O
ATOM 13 C1' G B 147 78.044 115.616 48.165 1.00 30.95 C
ATOM 14 N9 G B 147 77.615 114.818 47.019 1.00 32.73 N
ATOM 15 C8 G B 147 78.408 114.192 46.084 1.00 30.61 C
ATOM 16 N7 G B 147 77.721 113.533 45.193 1.00 30.71 N
ATOM 17 C5 G B 147 76.396 113.738 45.556 1.00 30.75 C
ATOM 18 C6 G B 147 75.194 113.271 44.960 1.00 30.82 C
ATOM 19 O6 G B 147 75.057 112.568 43.957 1.00 29.36 O
ATOM 20 N1 G B 147 74.073 113.711 45.657 1.00 31.58 N
ATOM 21 C2 G B 147 74.102 114.505 46.782 1.00 31.87 C
ATOM 22 N2 G B 147 72.912 114.838 47.315 1.00 30.07 N
ATOM 23 N3 G B 147 75.214 114.945 47.342 1.00 30.54 N
ATOM 24 C4 G B 147 76.314 114.528 46.681 1.00 30.97 C
ATOM 25 P A B 148 79.495 112.473 51.186 1.00 31.44 P
ATOM 26 OP1 A B 148 80.391 112.034 52.291 1.00 30.15 O
ATOM 27 OP2 A B 148 79.238 111.555 50.046 1.00 30.47 O
ATOM 28 O5' A B 148 78.084 112.920 51.771 1.00 28.17 O
TER

Atoms:
OP1: (65.713,117.338,46.610)
OP2: (68.120,116.629,46.022)
C3': (68.151,119.483,50.210)
C1': (69.450,118.088,51.597)
C5': (66.628,117.575,49.435)
O4': (68.352,117.343,51.108)
C8: (70.784,116.806,49.833)
O2': (68.573,120.112,52.529)
C6: (74.127,117.039,50.864)
C5: (72.759,117.046,50.572)
C4: (71.939,117.772,51.418)
P: (66.994,116.666,46.992)
C4': (67.354,118.246,50.570)
C2': (69.145,119.568,51.359)
C2: (73.627,118.415,52.652)
N1: (74.540,117.747,51.932)
N3: (72.314,118.492,52.483)
N6: (75.035,116.373,50.154)
N7: (72.019,116.447,49.567)
N9: (70.663,117.584,50.958)
O5': (67.528,117.306,48.352)
O3': (67.327,120.633,50.108)
OP1: (84.061,114.089,47.193)
OP2: (82.506,113.307,45.298)
C3': (79.595,114.323,49.358)
C1': (78.044,115.616,48.165)
C5': (81.638,115.469,48.314)
O6: (75.057,112.568,43.957)
O4': (79.350,116.116,47.913)
C8: (78.408,114.192,46.084)
C2: (74.102,114.505,46.782)
C6: (75.194,113.271,44.960)
C5: (76.396,113.738,45.556)
C4: (76.314,114.528,46.681)
P: (82.881,114.320,46.313)
C4': (80.267,115.607,48.916)
C2': (78.138,114.748,49.417)
O2': (77.817,115.517,50.555)
N1: (74.073,113.711,45.657)
N2: (72.912,114.838,47.315)
N3: (75.214,114.945,47.342)
N7: (77.721,113.533,45.193)
N9: (77.615,114.818,47.019)
O5': (81.598,114.560,47.215)
O3': (80.077,113.843,50.596)
Image (generated by PyMOL):
PyMOL image
show in jmol