ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A832:A841

Extra

PDB:
ATOM 1 O3' A A 831 158.503 135.465 -26.114 1.00 36.98 O
ATOM 2 P A A 832 158.543 134.576 -24.771 1.00 37.60 P
ATOM 3 OP1 A A 832 158.553 135.492 -23.594 1.00 39.70 O
ATOM 4 OP2 A A 832 159.635 133.586 -24.889 1.00 39.84 O
ATOM 5 O5' A A 832 157.163 133.796 -24.798 1.00 35.63 O
ATOM 6 C5' A A 832 155.942 134.439 -24.448 1.00 33.68 C
ATOM 7 C4' A A 832 154.775 133.514 -24.697 1.00 34.39 C
ATOM 8 O4' A A 832 154.701 133.181 -26.110 1.00 34.14 O
ATOM 9 C3' A A 832 154.804 132.177 -23.980 1.00 33.54 C
ATOM 10 O3' A A 832 154.283 132.281 -22.666 1.00 33.03 O
ATOM 11 C2' A A 832 153.913 131.318 -24.862 1.00 34.52 C
ATOM 12 O2' A A 832 152.557 131.541 -24.581 1.00 35.02 O
ATOM 13 C1' A A 832 154.217 131.862 -26.263 1.00 36.19 C
ATOM 14 N9 A A 832 155.226 131.066 -26.974 1.00 40.20 N
ATOM 15 C8 A A 832 156.559 131.353 -27.167 1.00 40.61 C
ATOM 16 N7 A A 832 157.213 130.421 -27.814 1.00 42.24 N
ATOM 17 C5 A A 832 156.249 129.455 -28.076 1.00 43.93 C
ATOM 18 C6 A A 832 156.302 128.206 -28.744 1.00 45.15 C
ATOM 19 N6 A A 832 157.416 127.683 -29.278 1.00 45.30 N
ATOM 20 N1 A A 832 155.155 127.501 -28.839 1.00 44.58 N
ATOM 21 C2 A A 832 154.045 128.009 -28.297 1.00 43.06 C
ATOM 22 N3 A A 832 153.869 129.156 -27.647 1.00 42.13 N
ATOM 23 C4 A A 832 155.020 129.842 -27.571 1.00 41.79 C
ATOM 24 P G A 833 154.986 131.465 -21.471 1.00 34.33 P
ATOM 25 OP1 G A 833 154.270 131.656 -20.168 1.00 34.15 O
ATOM 26 OP2 G A 833 156.417 131.777 -21.537 1.00 35.25 O
ATOM 27 O5' G A 833 154.772 129.961 -21.900 1.00 35.91 O
TER

ATOM 1 O3' C B 840 163.606 122.329 -33.090 1.00 26.32 O
ATOM 2 P G B 841 163.514 123.543 -34.137 1.00 29.44 P
ATOM 3 OP1 G B 841 163.176 123.015 -35.490 1.00 30.25 O
ATOM 4 OP2 G B 841 164.717 124.376 -33.948 1.00 30.78 O
ATOM 5 O5' G B 841 162.253 124.365 -33.665 1.00 31.10 O
ATOM 6 C5' G B 841 160.929 123.814 -33.744 1.00 31.13 C
ATOM 7 C4' G B 841 159.950 124.736 -33.063 1.00 31.32 C
ATOM 8 O4' G B 841 160.398 124.969 -31.703 1.00 32.92 O
ATOM 9 C3' G B 841 159.834 126.122 -33.673 1.00 30.18 C
ATOM 10 O3' G B 841 158.865 126.119 -34.670 1.00 27.71 O
ATOM 11 C2' G B 841 159.391 126.981 -32.501 1.00 31.85 C
ATOM 12 O2' G B 841 157.990 126.963 -32.302 1.00 32.77 O
ATOM 13 C1' G B 841 160.092 126.296 -31.325 1.00 33.94 C
ATOM 14 N9 G B 841 161.332 126.964 -30.966 1.00 36.74 N
ATOM 15 C8 G B 841 162.606 126.605 -31.324 1.00 38.30 C
ATOM 16 N7 G B 841 163.512 127.429 -30.880 1.00 41.20 N
ATOM 17 C5 G B 841 162.790 128.385 -30.181 1.00 41.98 C
ATOM 18 C6 G B 841 163.227 129.539 -29.485 1.00 43.37 C
ATOM 19 O6 G B 841 164.383 129.975 -29.360 1.00 45.04 O
ATOM 20 N1 G B 841 162.158 130.217 -28.906 1.00 44.40 N
ATOM 21 C2 G B 841 160.838 129.839 -28.998 1.00 43.17 C
ATOM 22 N2 G B 841 159.953 130.618 -28.379 1.00 43.12 N
ATOM 23 N3 G B 841 160.421 128.776 -29.652 1.00 42.35 N
ATOM 24 C4 G B 841 161.444 128.100 -30.216 1.00 40.50 C
ATOM 25 P U B 842 159.092 126.986 -35.989 1.00 28.74 P
ATOM 26 OP1 U B 842 160.179 126.328 -36.766 1.00 33.32 O
ATOM 27 OP2 U B 842 159.220 128.397 -35.621 1.00 29.30 O
ATOM 28 O5' U B 842 157.769 126.762 -36.806 1.00 28.65 O
TER

Atoms:
OP1: (158.553,135.492,-23.594)
OP2: (159.635,133.586,-24.889)
C3': (154.804,132.177,-23.980)
C1': (154.217,131.862,-26.263)
C5': (155.942,134.439,-24.448)
O4': (154.701,133.181,-26.110)
C8: (156.559,131.353,-27.167)
O2': (152.557,131.541,-24.581)
C6: (156.302,128.206,-28.744)
C5: (156.249,129.455,-28.076)
C4: (155.020,129.842,-27.571)
P: (158.543,134.576,-24.771)
C4': (154.775,133.514,-24.697)
C2': (153.913,131.318,-24.862)
C2: (154.045,128.009,-28.297)
N1: (155.155,127.501,-28.839)
N3: (153.869,129.156,-27.647)
N6: (157.416,127.683,-29.278)
N7: (157.213,130.421,-27.814)
N9: (155.226,131.066,-26.974)
O5': (157.163,133.796,-24.798)
O3': (154.283,132.281,-22.666)
OP1: (163.176,123.015,-35.490)
OP2: (164.717,124.376,-33.948)
C3': (159.834,126.122,-33.673)
C1': (160.092,126.296,-31.325)
C5': (160.929,123.814,-33.744)
O6: (164.383,129.975,-29.360)
O4': (160.398,124.969,-31.703)
C8: (162.606,126.605,-31.324)
C2: (160.838,129.839,-28.998)
C6: (163.227,129.539,-29.485)
C5: (162.790,128.385,-30.181)
C4: (161.444,128.100,-30.216)
P: (163.514,123.543,-34.137)
C4': (159.950,124.736,-33.063)
C2': (159.391,126.981,-32.501)
O2': (157.990,126.963,-32.302)
N1: (162.158,130.217,-28.906)
N2: (159.953,130.618,-28.379)
N3: (160.421,128.776,-29.652)
N7: (163.512,127.429,-30.880)
N9: (161.332,126.964,-30.966)
O5': (162.253,124.365,-33.665)
O3': (158.865,126.119,-34.670)
Image (generated by PyMOL):
PyMOL image
show in jmol