ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0319:0333

Extra

PDB:
ATOM 1 O3' C A 318 18.170 125.092 32.060 1.00 47.60 O
ATOM 2 P A A 319 19.637 124.453 32.189 1.00 48.27 P
ATOM 3 OP1 A A 319 20.282 124.385 30.862 1.00 50.36 O
ATOM 4 OP2 A A 319 19.515 123.216 32.990 1.00 52.14 O
ATOM 5 O5' A A 319 20.403 125.527 33.084 1.00 49.16 O
ATOM 6 C5' A A 319 21.089 126.640 32.491 1.00 43.06 C
ATOM 7 C4' A A 319 22.560 126.550 32.797 1.00 42.16 C
ATOM 8 O4' A A 319 23.303 126.885 31.600 1.00 44.72 O
ATOM 9 C3' A A 319 23.137 127.466 33.867 1.00 41.34 C
ATOM 10 O3' A A 319 22.958 127.009 35.203 1.00 41.46 O
ATOM 11 C2' A A 319 24.606 127.456 33.487 1.00 42.63 C
ATOM 12 O2' A A 319 25.232 126.245 33.854 1.00 42.57 O
ATOM 13 C1' A A 319 24.512 127.532 31.959 1.00 43.74 C
ATOM 14 N9 A A 319 24.430 128.923 31.508 1.00 43.01 N
ATOM 15 C8 A A 319 23.320 129.591 31.058 1.00 40.99 C
ATOM 16 N7 A A 319 23.534 130.855 30.799 1.00 42.87 N
ATOM 17 C5 A A 319 24.881 131.031 31.078 1.00 41.99 C
ATOM 18 C6 A A 319 25.715 132.156 31.019 1.00 41.81 C
ATOM 19 N6 A A 319 25.294 133.370 30.652 1.00 39.90 N
ATOM 20 N1 A A 319 27.010 131.995 31.363 1.00 41.69 N
ATOM 21 C2 A A 319 27.423 130.781 31.744 1.00 41.25 C
ATOM 22 N3 A A 319 26.734 129.650 31.846 1.00 40.49 N
ATOM 23 C4 A A 319 25.452 129.846 31.496 1.00 41.99 C
ATOM 24 P G A 320 22.425 128.029 36.339 1.00 45.14 P
ATOM 25 OP1 G A 320 22.394 127.250 37.601 1.00 44.50 O
ATOM 26 OP2 G A 320 21.190 128.722 35.876 1.00 44.64 O
ATOM 27 O5' G A 320 23.557 129.148 36.451 1.00 45.92 O
TER

ATOM 1 O3' C B 332 26.036 141.911 26.985 1.00 43.30 O
ATOM 2 P G B 333 26.315 140.848 25.819 1.00 44.03 P
ATOM 3 OP1 G B 333 27.415 141.372 24.975 1.00 46.50 O
ATOM 4 OP2 G B 333 25.015 140.476 25.206 1.00 46.71 O
ATOM 5 O5' G B 333 26.888 139.583 26.585 1.00 46.07 O
ATOM 6 C5' G B 333 26.702 138.252 26.085 1.00 43.97 C
ATOM 7 C4' G B 333 26.692 137.287 27.241 1.00 45.75 C
ATOM 8 O4' G B 333 25.648 137.668 28.177 1.00 46.25 O
ATOM 9 C3' G B 333 26.440 135.827 26.909 1.00 44.48 C
ATOM 10 O3' G B 333 27.674 135.187 26.617 1.00 43.33 O
ATOM 11 C2' G B 333 25.825 135.313 28.202 1.00 45.67 C
ATOM 12 O2' G B 333 26.811 135.126 29.200 1.00 44.43 O
ATOM 13 C1' G B 333 24.966 136.511 28.620 1.00 47.80 C
ATOM 14 N9 G B 333 23.611 136.560 28.070 1.00 50.56 N
ATOM 15 C8 G B 333 23.073 137.576 27.315 1.00 50.96 C
ATOM 16 N7 G B 333 21.822 137.380 27.005 1.00 52.46 N
ATOM 17 C5 G B 333 21.514 136.154 27.576 1.00 54.15 C
ATOM 18 C6 G B 333 20.297 135.422 27.578 1.00 54.74 C
ATOM 19 O6 G B 333 19.213 135.725 27.068 1.00 56.24 O
ATOM 20 N1 G B 333 20.424 134.223 28.268 1.00 54.35 N
ATOM 21 C2 G B 333 21.568 133.782 28.879 1.00 53.60 C
ATOM 22 N2 G B 333 21.485 132.598 29.496 1.00 53.09 N
ATOM 23 N3 G B 333 22.709 134.453 28.886 1.00 53.73 N
ATOM 24 C4 G B 333 22.610 135.625 28.224 1.00 52.43 C
ATOM 25 P U B 334 27.723 133.970 25.577 1.00 47.28 P
ATOM 26 OP1 U B 334 29.052 133.318 25.704 1.00 47.61 O
ATOM 27 OP2 U B 334 27.284 134.470 24.251 1.00 46.95 O
ATOM 28 O5' U B 334 26.619 132.956 26.121 1.00 47.55 O
TER

Atoms:
OP1: (20.282,124.385,30.862)
OP2: (19.515,123.216,32.990)
C3': (23.137,127.466,33.867)
C1': (24.512,127.532,31.959)
C5': (21.089,126.640,32.491)
O4': (23.303,126.885,31.600)
C8: (23.320,129.591,31.058)
O2': (25.232,126.245,33.854)
C6: (25.715,132.156,31.019)
C5: (24.881,131.031,31.078)
C4: (25.452,129.846,31.496)
P: (19.637,124.453,32.189)
C4': (22.560,126.550,32.797)
C2': (24.606,127.456,33.487)
C2: (27.423,130.781,31.744)
N1: (27.010,131.995,31.363)
N3: (26.734,129.650,31.846)
N6: (25.294,133.370,30.652)
N7: (23.534,130.855,30.799)
N9: (24.430,128.923,31.508)
O5': (20.403,125.527,33.084)
O3': (22.958,127.009,35.203)
OP1: (27.415,141.372,24.975)
OP2: (25.015,140.476,25.206)
C3': (26.440,135.827,26.909)
C1': (24.966,136.511,28.620)
C5': (26.702,138.252,26.085)
O6: (19.213,135.725,27.068)
O4': (25.648,137.668,28.177)
C8: (23.073,137.576,27.315)
C2: (21.568,133.782,28.879)
C6: (20.297,135.422,27.578)
C5: (21.514,136.154,27.576)
C4: (22.610,135.625,28.224)
P: (26.315,140.848,25.819)
C4': (26.692,137.287,27.241)
C2': (25.825,135.313,28.202)
O2': (26.811,135.126,29.200)
N1: (20.424,134.223,28.268)
N2: (21.485,132.598,29.496)
N3: (22.709,134.453,28.886)
N7: (21.822,137.380,27.005)
N9: (23.611,136.560,28.070)
O5': (26.888,139.583,26.585)
O3': (27.674,135.187,26.617)
Image (generated by PyMOL):
PyMOL image
show in jmol