ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCL:0273:0355

Extra

PDB:
ATOM 1 O3' C A 272 61.955 107.851 -4.581 1.00135.88 O
ATOM 2 P A A 273 62.060 107.855 -2.984 1.00133.09 P
ATOM 3 OP1 A A 273 60.802 107.264 -2.460 1.00133.00 O
ATOM 4 OP2 A A 273 62.475 109.211 -2.544 1.00133.73 O
ATOM 5 O5' A A 273 63.259 106.846 -2.698 1.00129.23 O
ATOM 6 C5' A A 273 63.042 105.628 -1.963 1.00122.30 C
ATOM 7 C4' A A 273 64.320 105.198 -1.287 1.00116.92 C
ATOM 8 O4' A A 273 65.291 104.807 -2.294 1.00115.74 O
ATOM 9 C3' A A 273 65.028 106.285 -0.496 1.00113.89 C
ATOM 10 O3' A A 273 64.459 106.463 0.799 1.00109.05 O
ATOM 11 C2' A A 273 66.461 105.770 -0.462 1.00113.69 C
ATOM 12 O2' A A 273 66.657 104.756 0.502 1.00113.31 O
ATOM 13 C1' A A 273 66.596 105.168 -1.865 1.00113.96 C
ATOM 14 N9 A A 273 67.159 106.103 -2.841 1.00112.81 N
ATOM 15 C8 A A 273 66.505 106.778 -3.845 1.00112.58 C
ATOM 16 N7 A A 273 67.282 107.572 -4.542 1.00111.77 N
ATOM 17 C5 A A 273 68.533 107.406 -3.964 1.00111.12 C
ATOM 18 C6 A A 273 69.787 107.977 -4.242 1.00110.37 C
ATOM 19 N6 A A 273 69.998 108.869 -5.210 1.00109.89 N
ATOM 20 N1 A A 273 70.832 107.595 -3.477 1.00110.35 N
ATOM 21 C2 A A 273 70.621 106.701 -2.503 1.00110.21 C
ATOM 22 N3 A A 273 69.492 106.096 -2.143 1.00110.41 N
ATOM 23 C4 A A 273 68.473 106.497 -2.921 1.00111.46 C
ATOM 24 P U A 274 64.161 107.949 1.343 1.00106.02 P
ATOM 25 OP1 U A 274 63.379 107.812 2.598 1.00105.35 O
ATOM 26 OP2 U A 274 63.621 108.770 0.229 1.00105.10 O
ATOM 27 O5' U A 274 65.596 108.518 1.728 1.00103.18 O
TER

ATOM 1 O3' U B 354 73.404 112.571 -9.534 1.00 99.88 O
ATOM 2 P G B 355 73.608 111.409 -10.629 1.00101.18 P
ATOM 3 OP1 G B 355 75.048 111.431 -10.997 1.00100.16 O
ATOM 4 OP2 G B 355 72.573 111.546 -11.689 1.00100.94 O
ATOM 5 O5' G B 355 73.324 110.063 -9.828 1.00101.41 O
ATOM 6 C5' G B 355 73.853 109.872 -8.505 1.00102.68 C
ATOM 7 C4' G B 355 72.962 108.945 -7.720 1.00103.65 C
ATOM 8 O4' G B 355 71.618 109.499 -7.713 1.00103.06 O
ATOM 9 C3' G B 355 72.830 107.533 -8.286 1.00104.95 C
ATOM 10 O3' G B 355 72.586 106.627 -7.213 1.00106.70 O
ATOM 11 C2' G B 355 71.585 107.649 -9.159 1.00104.33 C
ATOM 12 O2' G B 355 70.925 106.416 -9.374 1.00104.82 O
ATOM 13 C1' G B 355 70.725 108.583 -8.315 1.00103.45 C
ATOM 14 N9 G B 355 69.749 109.334 -9.092 1.00102.33 N
ATOM 15 C8 G B 355 69.965 110.020 -10.262 1.00102.29 C
ATOM 16 N7 G B 355 68.887 110.594 -10.722 1.00102.59 N
ATOM 17 C5 G B 355 67.903 110.266 -9.800 1.00102.53 C
ATOM 18 C6 G B 355 66.525 110.604 -9.764 1.00103.39 C
ATOM 19 O6 G B 355 65.875 111.284 -10.568 1.00104.49 O
ATOM 20 N1 G B 355 65.897 110.062 -8.648 1.00103.08 N
ATOM 21 C2 G B 355 66.512 109.298 -7.690 1.00102.77 C
ATOM 22 N2 G B 355 65.736 108.873 -6.683 1.00103.89 N
ATOM 23 N3 G B 355 67.793 108.976 -7.713 1.00101.65 N
ATOM 24 C4 G B 355 68.422 109.490 -8.788 1.00101.79 C
ATOM 25 P C B 356 73.402 105.244 -7.122 1.00107.51 P
ATOM 26 OP1 C B 356 74.660 105.499 -6.371 1.00107.12 O
ATOM 27 OP2 C B 356 73.467 104.641 -8.473 1.00107.73 O
ATOM 28 O5' C B 356 72.463 104.340 -6.210 1.00108.25 O
TER

Atoms:
OP1: (60.802,107.264,-2.460)
OP2: (62.475,109.211,-2.544)
C3': (65.028,106.285,-0.496)
C1': (66.596,105.168,-1.865)
C5': (63.042,105.628,-1.963)
O4': (65.291,104.807,-2.294)
C8: (66.505,106.778,-3.845)
O2': (66.657,104.756,0.502)
C6: (69.787,107.977,-4.242)
C5: (68.533,107.406,-3.964)
C4: (68.473,106.497,-2.921)
P: (62.060,107.855,-2.984)
C4': (64.320,105.198,-1.287)
C2': (66.461,105.770,-0.462)
C2: (70.621,106.701,-2.503)
N1: (70.832,107.595,-3.477)
N3: (69.492,106.096,-2.143)
N6: (69.998,108.869,-5.210)
N7: (67.282,107.572,-4.542)
N9: (67.159,106.103,-2.841)
O5': (63.259,106.846,-2.698)
O3': (64.459,106.463,0.799)
OP1: (75.048,111.431,-10.997)
OP2: (72.573,111.546,-11.689)
C3': (72.830,107.533,-8.286)
C1': (70.725,108.583,-8.315)
C5': (73.853,109.872,-8.505)
O6: (65.875,111.284,-10.568)
O4': (71.618,109.499,-7.713)
C8: (69.965,110.020,-10.262)
C2: (66.512,109.298,-7.690)
C6: (66.525,110.604,-9.764)
C5: (67.903,110.266,-9.800)
C4: (68.422,109.490,-8.788)
P: (73.608,111.409,-10.629)
C4': (72.962,108.945,-7.720)
C2': (71.585,107.649,-9.159)
O2': (70.925,106.416,-9.374)
N1: (65.897,110.062,-8.648)
N2: (65.736,108.873,-6.683)
N3: (67.793,108.976,-7.713)
N7: (68.887,110.594,-10.722)
N9: (69.749,109.334,-9.092)
O5': (73.324,110.063,-9.828)
O3': (72.586,106.627,-7.213)
Image (generated by PyMOL):
PyMOL image
show in jmol