Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A860:A909
Extra
PDB:
ATOM 1 O3' U A 859 -126.709 -67.407 8.365 1.00 0.01 O
ATOM 2 P A A 860 -127.236 -67.347 6.869 1.00 0.01 P
ATOM 3 OP1 A A 860 -126.242 -66.601 6.090 1.00 0.01 O
ATOM 4 OP2 A A 860 -128.616 -66.854 6.914 1.00 0.01 O
ATOM 5 O5' A A 860 -127.250 -68.865 6.451 1.00 0.01 O
ATOM 6 C5' A A 860 -126.214 -69.422 5.686 1.00 0.01 C
ATOM 7 C4' A A 860 -126.607 -70.756 5.149 1.00 0.01 C
ATOM 8 O4' A A 860 -127.302 -71.498 6.168 1.00 0.01 O
ATOM 9 C3' A A 860 -127.595 -70.740 4.026 1.00 0.01 C
ATOM 10 O3' A A 860 -127.026 -70.379 2.796 1.00 0.01 O
ATOM 11 C2' A A 860 -128.111 -72.153 4.065 1.00 0.01 C
ATOM 12 O2' A A 860 -127.144 -73.031 3.537 1.00 0.01 O
ATOM 13 C1' A A 860 -128.198 -72.391 5.563 1.00 0.01 C
ATOM 14 N9 A A 860 -129.541 -72.147 6.096 1.00 0.01 N
ATOM 15 C8 A A 860 -129.897 -71.190 6.959 1.00 0.01 C
ATOM 16 N7 A A 860 -131.152 -71.199 7.275 1.00 0.01 N
ATOM 17 C5 A A 860 -131.679 -72.254 6.600 1.00 0.01 C
ATOM 18 C6 A A 860 -132.985 -72.793 6.532 1.00 0.01 C
ATOM 19 N6 A A 860 -134.072 -72.339 7.160 1.00 0.01 N
ATOM 20 N1 A A 860 -133.170 -73.858 5.749 1.00 0.01 N
ATOM 21 C2 A A 860 -132.102 -74.328 5.105 1.00 0.01 C
ATOM 22 N3 A A 860 -130.835 -73.898 5.102 1.00 0.01 N
ATOM 23 C4 A A 860 -130.681 -72.841 5.879 1.00 0.01 C
ATOM 24 P G A 861 -127.617 -69.130 1.996 1.00 0.01 P
ATOM 25 OP1 G A 861 -126.715 -68.823 0.919 1.00 0.01 O
ATOM 26 OP2 G A 861 -127.899 -68.093 2.969 1.00 0.01 O
ATOM 27 O5' G A 861 -128.962 -69.715 1.408 1.00 0.01 O
TER
ATOM 1 O3' C B 908 -142.133 -69.541 10.406 1.00 7.26 O
ATOM 2 P G B 909 -141.457 -70.808 11.084 1.00 0.01 P
ATOM 3 OP1 G B 909 -142.465 -71.901 11.099 1.00 0.01 O
ATOM 4 OP2 G B 909 -140.857 -70.367 12.359 1.00 0.01 O
ATOM 5 O5' G B 909 -140.328 -71.148 10.072 1.00 0.01 O
ATOM 6 C5' G B 909 -140.258 -72.417 9.493 1.00 0.01 C
ATOM 7 C4' G B 909 -138.888 -72.656 8.986 1.00 0.01 C
ATOM 8 O4' G B 909 -138.387 -71.427 8.405 1.00 0.01 O
ATOM 9 C3' G B 909 -137.868 -72.986 10.044 1.00 0.01 C
ATOM 10 O3' G B 909 -137.916 -74.328 10.465 1.00 0.01 O
ATOM 11 C2' G B 909 -136.587 -72.604 9.356 1.00 0.01 C
ATOM 12 O2' G B 909 -136.268 -73.557 8.357 1.00 0.01 O
ATOM 13 C1' G B 909 -137.019 -71.314 8.671 1.00 0.01 C
ATOM 14 N9 G B 909 -136.823 -70.142 9.520 1.00 0.20 N
ATOM 15 C8 G B 909 -137.731 -69.499 10.306 1.00 0.20 C
ATOM 16 N7 G B 909 -137.245 -68.452 10.926 1.00 0.20 N
ATOM 17 C5 G B 909 -135.930 -68.407 10.507 1.00 0.20 C
ATOM 18 C6 G B 909 -134.886 -67.504 10.836 1.00 0.20 C
ATOM 19 O6 G B 909 -134.904 -66.528 11.582 1.00 0.20 O
ATOM 20 N1 G B 909 -133.721 -67.831 10.173 1.00 0.20 N
ATOM 21 C2 G B 909 -133.578 -68.904 9.311 1.00 0.20 C
ATOM 22 N2 G B 909 -132.370 -69.074 8.758 1.00 0.20 N
ATOM 23 N3 G B 909 -134.531 -69.769 9.005 1.00 0.20 N
ATOM 24 C4 G B 909 -135.671 -69.446 9.635 1.00 0.20 C
ATOM 25 P A B 910 -137.386 -74.709 11.923 1.00 0.01 P
ATOM 26 OP1 A B 910 -137.978 -76.003 12.269 1.00 0.01 O
ATOM 27 OP2 A B 910 -137.643 -73.549 12.810 1.00 0.01 O
ATOM 28 O5' A B 910 -135.820 -74.845 11.700 1.00 0.01 O
TER
ATOM 2 P A A 860 -127.236 -67.347 6.869 1.00 0.01 P
ATOM 3 OP1 A A 860 -126.242 -66.601 6.090 1.00 0.01 O
ATOM 4 OP2 A A 860 -128.616 -66.854 6.914 1.00 0.01 O
ATOM 5 O5' A A 860 -127.250 -68.865 6.451 1.00 0.01 O
ATOM 6 C5' A A 860 -126.214 -69.422 5.686 1.00 0.01 C
ATOM 7 C4' A A 860 -126.607 -70.756 5.149 1.00 0.01 C
ATOM 8 O4' A A 860 -127.302 -71.498 6.168 1.00 0.01 O
ATOM 9 C3' A A 860 -127.595 -70.740 4.026 1.00 0.01 C
ATOM 10 O3' A A 860 -127.026 -70.379 2.796 1.00 0.01 O
ATOM 11 C2' A A 860 -128.111 -72.153 4.065 1.00 0.01 C
ATOM 12 O2' A A 860 -127.144 -73.031 3.537 1.00 0.01 O
ATOM 13 C1' A A 860 -128.198 -72.391 5.563 1.00 0.01 C
ATOM 14 N9 A A 860 -129.541 -72.147 6.096 1.00 0.01 N
ATOM 15 C8 A A 860 -129.897 -71.190 6.959 1.00 0.01 C
ATOM 16 N7 A A 860 -131.152 -71.199 7.275 1.00 0.01 N
ATOM 17 C5 A A 860 -131.679 -72.254 6.600 1.00 0.01 C
ATOM 18 C6 A A 860 -132.985 -72.793 6.532 1.00 0.01 C
ATOM 19 N6 A A 860 -134.072 -72.339 7.160 1.00 0.01 N
ATOM 20 N1 A A 860 -133.170 -73.858 5.749 1.00 0.01 N
ATOM 21 C2 A A 860 -132.102 -74.328 5.105 1.00 0.01 C
ATOM 22 N3 A A 860 -130.835 -73.898 5.102 1.00 0.01 N
ATOM 23 C4 A A 860 -130.681 -72.841 5.879 1.00 0.01 C
ATOM 24 P G A 861 -127.617 -69.130 1.996 1.00 0.01 P
ATOM 25 OP1 G A 861 -126.715 -68.823 0.919 1.00 0.01 O
ATOM 26 OP2 G A 861 -127.899 -68.093 2.969 1.00 0.01 O
ATOM 27 O5' G A 861 -128.962 -69.715 1.408 1.00 0.01 O
TER
ATOM 1 O3' C B 908 -142.133 -69.541 10.406 1.00 7.26 O
ATOM 2 P G B 909 -141.457 -70.808 11.084 1.00 0.01 P
ATOM 3 OP1 G B 909 -142.465 -71.901 11.099 1.00 0.01 O
ATOM 4 OP2 G B 909 -140.857 -70.367 12.359 1.00 0.01 O
ATOM 5 O5' G B 909 -140.328 -71.148 10.072 1.00 0.01 O
ATOM 6 C5' G B 909 -140.258 -72.417 9.493 1.00 0.01 C
ATOM 7 C4' G B 909 -138.888 -72.656 8.986 1.00 0.01 C
ATOM 8 O4' G B 909 -138.387 -71.427 8.405 1.00 0.01 O
ATOM 9 C3' G B 909 -137.868 -72.986 10.044 1.00 0.01 C
ATOM 10 O3' G B 909 -137.916 -74.328 10.465 1.00 0.01 O
ATOM 11 C2' G B 909 -136.587 -72.604 9.356 1.00 0.01 C
ATOM 12 O2' G B 909 -136.268 -73.557 8.357 1.00 0.01 O
ATOM 13 C1' G B 909 -137.019 -71.314 8.671 1.00 0.01 C
ATOM 14 N9 G B 909 -136.823 -70.142 9.520 1.00 0.20 N
ATOM 15 C8 G B 909 -137.731 -69.499 10.306 1.00 0.20 C
ATOM 16 N7 G B 909 -137.245 -68.452 10.926 1.00 0.20 N
ATOM 17 C5 G B 909 -135.930 -68.407 10.507 1.00 0.20 C
ATOM 18 C6 G B 909 -134.886 -67.504 10.836 1.00 0.20 C
ATOM 19 O6 G B 909 -134.904 -66.528 11.582 1.00 0.20 O
ATOM 20 N1 G B 909 -133.721 -67.831 10.173 1.00 0.20 N
ATOM 21 C2 G B 909 -133.578 -68.904 9.311 1.00 0.20 C
ATOM 22 N2 G B 909 -132.370 -69.074 8.758 1.00 0.20 N
ATOM 23 N3 G B 909 -134.531 -69.769 9.005 1.00 0.20 N
ATOM 24 C4 G B 909 -135.671 -69.446 9.635 1.00 0.20 C
ATOM 25 P A B 910 -137.386 -74.709 11.923 1.00 0.01 P
ATOM 26 OP1 A B 910 -137.978 -76.003 12.269 1.00 0.01 O
ATOM 27 OP2 A B 910 -137.643 -73.549 12.810 1.00 0.01 O
ATOM 28 O5' A B 910 -135.820 -74.845 11.700 1.00 0.01 O
TER
Atoms:
OP1: (-126.242,-66.601,6.090)
OP2: (-128.616,-66.854,6.914)
C3': (-127.595,-70.740,4.026)
C1': (-128.198,-72.391,5.563)
C5': (-126.214,-69.422,5.686)
O4': (-127.302,-71.498,6.168)
C8: (-129.897,-71.190,6.959)
O2': (-127.144,-73.031,3.537)
C6: (-132.985,-72.793,6.532)
C5: (-131.679,-72.254,6.600)
C4: (-130.681,-72.841,5.879)
P: (-127.236,-67.347,6.869)
C4': (-126.607,-70.756,5.149)
C2': (-128.111,-72.153,4.065)
C2: (-132.102,-74.328,5.105)
N1: (-133.170,-73.858,5.749)
N3: (-130.835,-73.898,5.102)
N6: (-134.072,-72.339,7.160)
N7: (-131.152,-71.199,7.275)
N9: (-129.541,-72.147,6.096)
O5': (-127.250,-68.865,6.451)
O3': (-127.026,-70.379,2.796)
OP2: (-128.616,-66.854,6.914)
C3': (-127.595,-70.740,4.026)
C1': (-128.198,-72.391,5.563)
C5': (-126.214,-69.422,5.686)
O4': (-127.302,-71.498,6.168)
C8: (-129.897,-71.190,6.959)
O2': (-127.144,-73.031,3.537)
C6: (-132.985,-72.793,6.532)
C5: (-131.679,-72.254,6.600)
C4: (-130.681,-72.841,5.879)
P: (-127.236,-67.347,6.869)
C4': (-126.607,-70.756,5.149)
C2': (-128.111,-72.153,4.065)
C2: (-132.102,-74.328,5.105)
N1: (-133.170,-73.858,5.749)
N3: (-130.835,-73.898,5.102)
N6: (-134.072,-72.339,7.160)
N7: (-131.152,-71.199,7.275)
N9: (-129.541,-72.147,6.096)
O5': (-127.250,-68.865,6.451)
O3': (-127.026,-70.379,2.796)
OP1: (-142.465,-71.901,11.099)
OP2: (-140.857,-70.367,12.359)
C3': (-137.868,-72.986,10.044)
C1': (-137.019,-71.314,8.671)
C5': (-140.258,-72.417,9.493)
O6: (-134.904,-66.528,11.582)
O4': (-138.387,-71.427,8.405)
C8: (-137.731,-69.499,10.306)
C2: (-133.578,-68.904,9.311)
C6: (-134.886,-67.504,10.836)
C5: (-135.930,-68.407,10.507)
C4: (-135.671,-69.446,9.635)
P: (-141.457,-70.808,11.084)
C4': (-138.888,-72.656,8.986)
C2': (-136.587,-72.604,9.356)
O2': (-136.268,-73.557,8.357)
N1: (-133.721,-67.831,10.173)
N2: (-132.370,-69.074,8.758)
N3: (-134.531,-69.769,9.005)
N7: (-137.245,-68.452,10.926)
N9: (-136.823,-70.142,9.520)
O5': (-140.328,-71.148,10.072)
O3': (-137.916,-74.328,10.465)
OP2: (-140.857,-70.367,12.359)
C3': (-137.868,-72.986,10.044)
C1': (-137.019,-71.314,8.671)
C5': (-140.258,-72.417,9.493)
O6: (-134.904,-66.528,11.582)
O4': (-138.387,-71.427,8.405)
C8: (-137.731,-69.499,10.306)
C2: (-133.578,-68.904,9.311)
C6: (-134.886,-67.504,10.836)
C5: (-135.930,-68.407,10.507)
C4: (-135.671,-69.446,9.635)
P: (-141.457,-70.808,11.084)
C4': (-138.888,-72.656,8.986)
C2': (-136.587,-72.604,9.356)
O2': (-136.268,-73.557,8.357)
N1: (-133.721,-67.831,10.173)
N2: (-132.370,-69.074,8.758)
N3: (-134.531,-69.769,9.005)
N7: (-137.245,-68.452,10.926)
N9: (-136.823,-70.142,9.520)
O5': (-140.328,-71.148,10.072)
O3': (-137.916,-74.328,10.465)
Image (generated by PyMOL):