Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8W:D4:D5
Extra
PDB:
ATOM 1 O3' A A 3 1.014 9.322 6.710 0.72 57.65 O
ATOM 2 P U A 4 2.372 8.476 6.502 0.72 59.64 P
ATOM 3 OP1 U A 4 3.000 8.951 5.240 0.72 58.55 O
ATOM 4 OP2 U A 4 2.058 7.033 6.669 0.72 57.49 O
ATOM 5 O5' U A 4 3.306 8.919 7.718 0.72 62.78 O
ATOM 6 C5' U A 4 2.877 8.747 9.064 0.72 68.94 C
ATOM 7 C4' U A 4 3.842 9.408 10.022 0.72 72.47 C
ATOM 8 O4' U A 4 3.210 9.497 11.322 0.72 74.36 O
ATOM 9 C3' U A 4 5.160 8.685 10.268 0.72 73.49 C
ATOM 10 O3' U A 4 6.127 9.097 9.300 0.72 74.11 O
ATOM 11 C2' U A 4 5.552 9.163 11.667 0.72 74.78 C
ATOM 12 O2' U A 4 6.261 10.388 11.648 0.72 73.93 O
ATOM 13 C1' U A 4 4.187 9.373 12.336 0.72 75.79 C
ATOM 14 N1 U A 4 3.753 8.315 13.261 0.72 78.30 N
ATOM 15 C2 U A 4 3.863 8.567 14.621 0.72 78.89 C
ATOM 16 O2 U A 4 4.328 9.603 15.068 0.72 78.73 O
ATOM 17 N3 U A 4 3.404 7.561 15.437 0.72 79.53 N
ATOM 18 C4 U A 4 2.863 6.352 15.044 0.72 79.70 C
ATOM 19 O4 U A 4 2.445 5.569 15.903 0.72 79.69 O
ATOM 20 C5 U A 4 2.803 6.158 13.623 0.72 79.15 C
ATOM 21 C6 U A 4 3.240 7.122 12.801 0.72 78.54 C
ATOM 22 P A A 5 7.452 8.215 9.052 0.72 73.96 P
ATOM 23 OP1 A A 5 7.376 7.643 7.684 0.72 75.25 O
ATOM 24 OP2 A A 5 7.627 7.310 10.217 0.72 74.74 O
ATOM 25 O5' A A 5 8.640 9.280 9.079 0.72 74.55 O
TER
ATOM 1 O3' U B 4 6.127 9.097 9.300 0.72 74.11 O
ATOM 2 P A B 5 7.452 8.215 9.052 0.72 73.96 P
ATOM 3 OP1 A B 5 7.376 7.643 7.684 0.72 75.25 O
ATOM 4 OP2 A B 5 7.627 7.310 10.217 0.72 74.74 O
ATOM 5 O5' A B 5 8.640 9.280 9.079 0.72 74.55 O
ATOM 6 C5' A B 5 8.582 10.470 8.294 0.72 74.23 C
ATOM 7 C4' A B 5 9.394 11.566 8.948 0.72 75.74 C
ATOM 8 O4' A B 5 8.878 11.793 10.284 0.72 73.68 O
ATOM 9 C3' A B 5 10.874 11.270 9.153 0.72 77.35 C
ATOM 10 O3' A B 5 11.616 11.660 8.001 0.72 81.83 O
ATOM 11 C2' A B 5 11.234 12.165 10.334 0.72 75.65 C
ATOM 12 O2' A B 5 11.519 13.494 9.947 0.72 75.87 O
ATOM 13 C1' A B 5 9.940 12.144 11.151 0.72 72.59 C
ATOM 14 N9 A B 5 9.946 11.214 12.280 0.72 69.17 N
ATOM 15 C8 A B 5 9.473 9.925 12.334 0.72 68.18 C
ATOM 16 N7 A B 5 9.580 9.371 13.519 0.72 65.85 N
ATOM 17 C5 A B 5 10.174 10.358 14.295 0.72 65.76 C
ATOM 18 C6 A B 5 10.551 10.402 15.650 0.72 64.05 C
ATOM 19 N6 A B 5 10.366 9.395 16.506 0.72 61.29 N
ATOM 20 N1 A B 5 11.127 11.536 16.103 0.72 62.88 N
ATOM 21 C2 A B 5 11.304 12.553 15.250 0.72 64.22 C
ATOM 22 N3 A B 5 10.987 12.635 13.960 0.72 65.55 N
ATOM 23 C4 A B 5 10.420 11.491 13.539 0.72 66.68 C
ATOM 24 P U B 6 12.945 10.853 7.588 0.72 87.18 P
ATOM 25 OP1 U B 6 13.683 11.709 6.622 0.72 86.09 O
ATOM 26 OP2 U B 6 12.553 9.473 7.194 0.72 87.15 O
ATOM 27 O5' U B 6 13.809 10.771 8.927 0.72 87.42 O
TER
ATOM 2 P U A 4 2.372 8.476 6.502 0.72 59.64 P
ATOM 3 OP1 U A 4 3.000 8.951 5.240 0.72 58.55 O
ATOM 4 OP2 U A 4 2.058 7.033 6.669 0.72 57.49 O
ATOM 5 O5' U A 4 3.306 8.919 7.718 0.72 62.78 O
ATOM 6 C5' U A 4 2.877 8.747 9.064 0.72 68.94 C
ATOM 7 C4' U A 4 3.842 9.408 10.022 0.72 72.47 C
ATOM 8 O4' U A 4 3.210 9.497 11.322 0.72 74.36 O
ATOM 9 C3' U A 4 5.160 8.685 10.268 0.72 73.49 C
ATOM 10 O3' U A 4 6.127 9.097 9.300 0.72 74.11 O
ATOM 11 C2' U A 4 5.552 9.163 11.667 0.72 74.78 C
ATOM 12 O2' U A 4 6.261 10.388 11.648 0.72 73.93 O
ATOM 13 C1' U A 4 4.187 9.373 12.336 0.72 75.79 C
ATOM 14 N1 U A 4 3.753 8.315 13.261 0.72 78.30 N
ATOM 15 C2 U A 4 3.863 8.567 14.621 0.72 78.89 C
ATOM 16 O2 U A 4 4.328 9.603 15.068 0.72 78.73 O
ATOM 17 N3 U A 4 3.404 7.561 15.437 0.72 79.53 N
ATOM 18 C4 U A 4 2.863 6.352 15.044 0.72 79.70 C
ATOM 19 O4 U A 4 2.445 5.569 15.903 0.72 79.69 O
ATOM 20 C5 U A 4 2.803 6.158 13.623 0.72 79.15 C
ATOM 21 C6 U A 4 3.240 7.122 12.801 0.72 78.54 C
ATOM 22 P A A 5 7.452 8.215 9.052 0.72 73.96 P
ATOM 23 OP1 A A 5 7.376 7.643 7.684 0.72 75.25 O
ATOM 24 OP2 A A 5 7.627 7.310 10.217 0.72 74.74 O
ATOM 25 O5' A A 5 8.640 9.280 9.079 0.72 74.55 O
TER
ATOM 1 O3' U B 4 6.127 9.097 9.300 0.72 74.11 O
ATOM 2 P A B 5 7.452 8.215 9.052 0.72 73.96 P
ATOM 3 OP1 A B 5 7.376 7.643 7.684 0.72 75.25 O
ATOM 4 OP2 A B 5 7.627 7.310 10.217 0.72 74.74 O
ATOM 5 O5' A B 5 8.640 9.280 9.079 0.72 74.55 O
ATOM 6 C5' A B 5 8.582 10.470 8.294 0.72 74.23 C
ATOM 7 C4' A B 5 9.394 11.566 8.948 0.72 75.74 C
ATOM 8 O4' A B 5 8.878 11.793 10.284 0.72 73.68 O
ATOM 9 C3' A B 5 10.874 11.270 9.153 0.72 77.35 C
ATOM 10 O3' A B 5 11.616 11.660 8.001 0.72 81.83 O
ATOM 11 C2' A B 5 11.234 12.165 10.334 0.72 75.65 C
ATOM 12 O2' A B 5 11.519 13.494 9.947 0.72 75.87 O
ATOM 13 C1' A B 5 9.940 12.144 11.151 0.72 72.59 C
ATOM 14 N9 A B 5 9.946 11.214 12.280 0.72 69.17 N
ATOM 15 C8 A B 5 9.473 9.925 12.334 0.72 68.18 C
ATOM 16 N7 A B 5 9.580 9.371 13.519 0.72 65.85 N
ATOM 17 C5 A B 5 10.174 10.358 14.295 0.72 65.76 C
ATOM 18 C6 A B 5 10.551 10.402 15.650 0.72 64.05 C
ATOM 19 N6 A B 5 10.366 9.395 16.506 0.72 61.29 N
ATOM 20 N1 A B 5 11.127 11.536 16.103 0.72 62.88 N
ATOM 21 C2 A B 5 11.304 12.553 15.250 0.72 64.22 C
ATOM 22 N3 A B 5 10.987 12.635 13.960 0.72 65.55 N
ATOM 23 C4 A B 5 10.420 11.491 13.539 0.72 66.68 C
ATOM 24 P U B 6 12.945 10.853 7.588 0.72 87.18 P
ATOM 25 OP1 U B 6 13.683 11.709 6.622 0.72 86.09 O
ATOM 26 OP2 U B 6 12.553 9.473 7.194 0.72 87.15 O
ATOM 27 O5' U B 6 13.809 10.771 8.927 0.72 87.42 O
TER
Atoms:
C4: (2.863,6.352,15.044)
N3: (3.404,7.561,15.437)
OP1: (3.000,8.951,5.240)
OP2: (2.058,7.033,6.669)
C2: (3.863,8.567,14.621)
C1': (4.187,9.373,12.336)
C3': (5.160,8.685,10.268)
O5': (3.306,8.919,7.718)
O4': (3.210,9.497,11.322)
C5': (2.877,8.747,9.064)
P: (2.372,8.476,6.502)
C4': (3.842,9.408,10.022)
C2': (5.552,9.163,11.667)
O2': (6.261,10.388,11.648)
N1: (3.753,8.315,13.261)
O4: (2.445,5.569,15.903)
O2: (4.328,9.603,15.068)
C6: (3.240,7.122,12.801)
C5: (2.803,6.158,13.623)
O3': (6.127,9.097,9.300)
N3: (3.404,7.561,15.437)
OP1: (3.000,8.951,5.240)
OP2: (2.058,7.033,6.669)
C2: (3.863,8.567,14.621)
C1': (4.187,9.373,12.336)
C3': (5.160,8.685,10.268)
O5': (3.306,8.919,7.718)
O4': (3.210,9.497,11.322)
C5': (2.877,8.747,9.064)
P: (2.372,8.476,6.502)
C4': (3.842,9.408,10.022)
C2': (5.552,9.163,11.667)
O2': (6.261,10.388,11.648)
N1: (3.753,8.315,13.261)
O4: (2.445,5.569,15.903)
O2: (4.328,9.603,15.068)
C6: (3.240,7.122,12.801)
C5: (2.803,6.158,13.623)
O3': (6.127,9.097,9.300)
OP1: (7.376,7.643,7.684)
OP2: (7.627,7.310,10.217)
C3': (10.874,11.270,9.153)
C1': (9.940,12.144,11.151)
C5': (8.582,10.470,8.294)
O4': (8.878,11.793,10.284)
C8: (9.473,9.925,12.334)
O2': (11.519,13.494,9.947)
C6: (10.551,10.402,15.650)
C5: (10.174,10.358,14.295)
C4: (10.420,11.491,13.539)
P: (7.452,8.215,9.052)
C4': (9.394,11.566,8.948)
C2': (11.234,12.165,10.334)
C2: (11.304,12.553,15.250)
N1: (11.127,11.536,16.103)
N3: (10.987,12.635,13.960)
N6: (10.366,9.395,16.506)
N7: (9.580,9.371,13.519)
N9: (9.946,11.214,12.280)
O5': (8.640,9.280,9.079)
O3': (11.616,11.660,8.001)
OP2: (7.627,7.310,10.217)
C3': (10.874,11.270,9.153)
C1': (9.940,12.144,11.151)
C5': (8.582,10.470,8.294)
O4': (8.878,11.793,10.284)
C8: (9.473,9.925,12.334)
O2': (11.519,13.494,9.947)
C6: (10.551,10.402,15.650)
C5: (10.174,10.358,14.295)
C4: (10.420,11.491,13.539)
P: (7.452,8.215,9.052)
C4': (9.394,11.566,8.948)
C2': (11.234,12.165,10.334)
C2: (11.304,12.553,15.250)
N1: (11.127,11.536,16.103)
N3: (10.987,12.635,13.960)
N6: (10.366,9.395,16.506)
N7: (9.580,9.371,13.519)
N9: (9.946,11.214,12.280)
O5': (8.640,9.280,9.079)
O3': (11.616,11.660,8.001)
Image (generated by PyMOL):