Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8X:D4:D5
Extra
PDB:
ATOM 1 O3' A A 3 0.829 9.102 6.962 1.00 61.99 O
ATOM 2 P U A 4 2.188 8.256 6.776 1.00 65.54 P
ATOM 3 OP1 U A 4 2.834 8.707 5.513 1.00 64.05 O
ATOM 4 OP2 U A 4 1.864 6.818 6.962 1.00 62.37 O
ATOM 5 O5' U A 4 3.115 8.729 7.985 1.00 69.02 O
ATOM 6 C5' U A 4 2.670 8.645 9.335 1.00 75.43 C
ATOM 7 C4' U A 4 3.596 9.428 10.239 1.00 80.92 C
ATOM 8 O4' U A 4 3.026 9.475 11.572 1.00 82.86 O
ATOM 9 C3' U A 4 4.992 8.852 10.436 1.00 82.68 C
ATOM 10 O3' U A 4 5.874 9.298 9.410 1.00 85.20 O
ATOM 11 C2' U A 4 5.390 9.429 11.789 1.00 83.52 C
ATOM 12 O2' U A 4 5.850 10.763 11.695 1.00 84.17 O
ATOM 13 C1' U A 4 4.057 9.397 12.541 1.00 84.12 C
ATOM 14 N1 U A 4 3.850 8.170 13.323 1.00 84.99 N
ATOM 15 C2 U A 4 3.715 8.294 14.699 1.00 85.61 C
ATOM 16 O2 U A 4 3.763 9.367 15.279 1.00 83.82 O
ATOM 17 N3 U A 4 3.515 7.112 15.368 1.00 86.80 N
ATOM 18 C4 U A 4 3.437 5.849 14.819 1.00 88.62 C
ATOM 19 O4 U A 4 3.251 4.880 15.557 1.00 91.08 O
ATOM 20 C5 U A 4 3.591 5.805 13.394 1.00 88.35 C
ATOM 21 C6 U A 4 3.788 6.938 12.713 1.00 85.52 C
ATOM 22 P A A 5 7.240 8.497 9.124 1.00 86.33 P
ATOM 23 OP1 A A 5 7.296 8.163 7.675 1.00 87.16 O
ATOM 24 OP2 A A 5 7.342 7.411 10.132 1.00 86.26 O
ATOM 25 O5' A A 5 8.383 9.564 9.431 1.00 85.72 O
TER
ATOM 1 O3' U B 4 5.874 9.298 9.410 1.00 85.20 O
ATOM 2 P A B 5 7.240 8.497 9.124 1.00 86.33 P
ATOM 3 OP1 A B 5 7.296 8.163 7.675 1.00 87.16 O
ATOM 4 OP2 A B 5 7.342 7.411 10.132 1.00 86.26 O
ATOM 5 O5' A B 5 8.383 9.564 9.431 1.00 85.72 O
ATOM 6 C5' A B 5 8.490 10.767 8.674 1.00 82.47 C
ATOM 7 C4' A B 5 9.452 11.721 9.343 1.00 81.08 C
ATOM 8 O4' A B 5 8.917 12.100 10.640 1.00 76.68 O
ATOM 9 C3' A B 5 10.835 11.163 9.660 1.00 80.60 C
ATOM 10 O3' A B 5 11.718 11.253 8.547 1.00 85.27 O
ATOM 11 C2' A B 5 11.285 12.076 10.790 1.00 78.24 C
ATOM 12 O2' A B 5 11.744 13.332 10.335 1.00 77.97 O
ATOM 13 C1' A B 5 9.980 12.245 11.569 1.00 75.50 C
ATOM 14 N9 A B 5 9.836 11.222 12.608 1.00 70.20 N
ATOM 15 C8 A B 5 9.239 9.987 12.524 1.00 66.65 C
ATOM 16 N7 A B 5 9.284 9.301 13.641 1.00 63.30 N
ATOM 17 C5 A B 5 9.956 10.140 14.519 1.00 63.60 C
ATOM 18 C6 A B 5 10.316 10.005 15.874 1.00 60.58 C
ATOM 19 N6 A B 5 10.050 8.926 16.614 1.00 54.15 N
ATOM 20 N1 A B 5 10.968 11.037 16.452 1.00 60.77 N
ATOM 21 C2 A B 5 11.238 12.121 15.715 1.00 60.80 C
ATOM 22 N3 A B 5 10.955 12.366 14.441 1.00 63.38 N
ATOM 23 C4 A B 5 10.304 11.325 13.894 1.00 66.17 C
ATOM 24 P U B 6 12.769 10.066 8.261 1.00 90.50 P
ATOM 25 OP1 U B 6 13.309 10.291 6.894 1.00 89.14 O
ATOM 26 OP2 U B 6 12.132 8.764 8.598 1.00 90.61 O
ATOM 27 O5' U B 6 13.954 10.304 9.301 1.00 87.70 O
TER
ATOM 2 P U A 4 2.188 8.256 6.776 1.00 65.54 P
ATOM 3 OP1 U A 4 2.834 8.707 5.513 1.00 64.05 O
ATOM 4 OP2 U A 4 1.864 6.818 6.962 1.00 62.37 O
ATOM 5 O5' U A 4 3.115 8.729 7.985 1.00 69.02 O
ATOM 6 C5' U A 4 2.670 8.645 9.335 1.00 75.43 C
ATOM 7 C4' U A 4 3.596 9.428 10.239 1.00 80.92 C
ATOM 8 O4' U A 4 3.026 9.475 11.572 1.00 82.86 O
ATOM 9 C3' U A 4 4.992 8.852 10.436 1.00 82.68 C
ATOM 10 O3' U A 4 5.874 9.298 9.410 1.00 85.20 O
ATOM 11 C2' U A 4 5.390 9.429 11.789 1.00 83.52 C
ATOM 12 O2' U A 4 5.850 10.763 11.695 1.00 84.17 O
ATOM 13 C1' U A 4 4.057 9.397 12.541 1.00 84.12 C
ATOM 14 N1 U A 4 3.850 8.170 13.323 1.00 84.99 N
ATOM 15 C2 U A 4 3.715 8.294 14.699 1.00 85.61 C
ATOM 16 O2 U A 4 3.763 9.367 15.279 1.00 83.82 O
ATOM 17 N3 U A 4 3.515 7.112 15.368 1.00 86.80 N
ATOM 18 C4 U A 4 3.437 5.849 14.819 1.00 88.62 C
ATOM 19 O4 U A 4 3.251 4.880 15.557 1.00 91.08 O
ATOM 20 C5 U A 4 3.591 5.805 13.394 1.00 88.35 C
ATOM 21 C6 U A 4 3.788 6.938 12.713 1.00 85.52 C
ATOM 22 P A A 5 7.240 8.497 9.124 1.00 86.33 P
ATOM 23 OP1 A A 5 7.296 8.163 7.675 1.00 87.16 O
ATOM 24 OP2 A A 5 7.342 7.411 10.132 1.00 86.26 O
ATOM 25 O5' A A 5 8.383 9.564 9.431 1.00 85.72 O
TER
ATOM 1 O3' U B 4 5.874 9.298 9.410 1.00 85.20 O
ATOM 2 P A B 5 7.240 8.497 9.124 1.00 86.33 P
ATOM 3 OP1 A B 5 7.296 8.163 7.675 1.00 87.16 O
ATOM 4 OP2 A B 5 7.342 7.411 10.132 1.00 86.26 O
ATOM 5 O5' A B 5 8.383 9.564 9.431 1.00 85.72 O
ATOM 6 C5' A B 5 8.490 10.767 8.674 1.00 82.47 C
ATOM 7 C4' A B 5 9.452 11.721 9.343 1.00 81.08 C
ATOM 8 O4' A B 5 8.917 12.100 10.640 1.00 76.68 O
ATOM 9 C3' A B 5 10.835 11.163 9.660 1.00 80.60 C
ATOM 10 O3' A B 5 11.718 11.253 8.547 1.00 85.27 O
ATOM 11 C2' A B 5 11.285 12.076 10.790 1.00 78.24 C
ATOM 12 O2' A B 5 11.744 13.332 10.335 1.00 77.97 O
ATOM 13 C1' A B 5 9.980 12.245 11.569 1.00 75.50 C
ATOM 14 N9 A B 5 9.836 11.222 12.608 1.00 70.20 N
ATOM 15 C8 A B 5 9.239 9.987 12.524 1.00 66.65 C
ATOM 16 N7 A B 5 9.284 9.301 13.641 1.00 63.30 N
ATOM 17 C5 A B 5 9.956 10.140 14.519 1.00 63.60 C
ATOM 18 C6 A B 5 10.316 10.005 15.874 1.00 60.58 C
ATOM 19 N6 A B 5 10.050 8.926 16.614 1.00 54.15 N
ATOM 20 N1 A B 5 10.968 11.037 16.452 1.00 60.77 N
ATOM 21 C2 A B 5 11.238 12.121 15.715 1.00 60.80 C
ATOM 22 N3 A B 5 10.955 12.366 14.441 1.00 63.38 N
ATOM 23 C4 A B 5 10.304 11.325 13.894 1.00 66.17 C
ATOM 24 P U B 6 12.769 10.066 8.261 1.00 90.50 P
ATOM 25 OP1 U B 6 13.309 10.291 6.894 1.00 89.14 O
ATOM 26 OP2 U B 6 12.132 8.764 8.598 1.00 90.61 O
ATOM 27 O5' U B 6 13.954 10.304 9.301 1.00 87.70 O
TER
Atoms:
C4: (3.437,5.849,14.819)
N3: (3.515,7.112,15.368)
OP1: (2.834,8.707,5.513)
OP2: (1.864,6.818,6.962)
C2: (3.715,8.294,14.699)
C1': (4.057,9.397,12.541)
C3': (4.992,8.852,10.436)
O5': (3.115,8.729,7.985)
O4': (3.026,9.475,11.572)
C5': (2.670,8.645,9.335)
P: (2.188,8.256,6.776)
C4': (3.596,9.428,10.239)
C2': (5.390,9.429,11.789)
O2': (5.850,10.763,11.695)
N1: (3.850,8.170,13.323)
O4: (3.251,4.880,15.557)
O2: (3.763,9.367,15.279)
C6: (3.788,6.938,12.713)
C5: (3.591,5.805,13.394)
O3': (5.874,9.298,9.410)
N3: (3.515,7.112,15.368)
OP1: (2.834,8.707,5.513)
OP2: (1.864,6.818,6.962)
C2: (3.715,8.294,14.699)
C1': (4.057,9.397,12.541)
C3': (4.992,8.852,10.436)
O5': (3.115,8.729,7.985)
O4': (3.026,9.475,11.572)
C5': (2.670,8.645,9.335)
P: (2.188,8.256,6.776)
C4': (3.596,9.428,10.239)
C2': (5.390,9.429,11.789)
O2': (5.850,10.763,11.695)
N1: (3.850,8.170,13.323)
O4: (3.251,4.880,15.557)
O2: (3.763,9.367,15.279)
C6: (3.788,6.938,12.713)
C5: (3.591,5.805,13.394)
O3': (5.874,9.298,9.410)
OP1: (7.296,8.163,7.675)
OP2: (7.342,7.411,10.132)
C3': (10.835,11.163,9.660)
C1': (9.980,12.245,11.569)
C5': (8.490,10.767,8.674)
O4': (8.917,12.100,10.640)
C8: (9.239,9.987,12.524)
O2': (11.744,13.332,10.335)
C6: (10.316,10.005,15.874)
C5: (9.956,10.140,14.519)
C4: (10.304,11.325,13.894)
P: (7.240,8.497,9.124)
C4': (9.452,11.721,9.343)
C2': (11.285,12.076,10.790)
C2: (11.238,12.121,15.715)
N1: (10.968,11.037,16.452)
N3: (10.955,12.366,14.441)
N6: (10.050,8.926,16.614)
N7: (9.284,9.301,13.641)
N9: (9.836,11.222,12.608)
O5': (8.383,9.564,9.431)
O3': (11.718,11.253,8.547)
OP2: (7.342,7.411,10.132)
C3': (10.835,11.163,9.660)
C1': (9.980,12.245,11.569)
C5': (8.490,10.767,8.674)
O4': (8.917,12.100,10.640)
C8: (9.239,9.987,12.524)
O2': (11.744,13.332,10.335)
C6: (10.316,10.005,15.874)
C5: (9.956,10.140,14.519)
C4: (10.304,11.325,13.894)
P: (7.240,8.497,9.124)
C4': (9.452,11.721,9.343)
C2': (11.285,12.076,10.790)
C2: (11.238,12.121,15.715)
N1: (10.968,11.037,16.452)
N3: (10.955,12.366,14.441)
N6: (10.050,8.926,16.614)
N7: (9.284,9.301,13.641)
N9: (9.836,11.222,12.608)
O5': (8.383,9.564,9.431)
O3': (11.718,11.253,8.547)
Image (generated by PyMOL):