Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8Y:D6:D7
Extra
PDB:
ATOM 1 O3' A A 5 31.671 5.089 12.679 1.00 39.92 O
ATOM 2 P C A 6 30.627 4.344 13.640 1.00 43.81 P
ATOM 3 OP1 C A 6 30.364 3.020 13.023 1.00 39.25 O
ATOM 4 OP2 C A 6 29.497 5.267 13.920 1.00 40.02 O
ATOM 5 O5' C A 6 31.441 4.157 14.998 1.00 44.80 O
ATOM 6 C5' C A 6 30.778 3.839 16.218 1.00 48.84 C
ATOM 7 C4' C A 6 31.771 3.304 17.222 1.00 50.84 C
ATOM 8 O4' C A 6 32.522 4.394 17.826 1.00 53.03 O
ATOM 9 C3' C A 6 31.181 2.625 18.442 1.00 52.17 C
ATOM 10 O3' C A 6 30.792 1.303 18.108 1.00 52.80 O
ATOM 11 C2' C A 6 32.375 2.611 19.392 1.00 52.82 C
ATOM 12 O2' C A 6 33.298 1.570 19.116 1.00 52.35 O
ATOM 13 C1' C A 6 33.026 3.964 19.086 1.00 54.04 C
ATOM 14 N1 C A 6 32.730 4.975 20.117 1.00 55.49 N
ATOM 15 C2 C A 6 33.668 5.177 21.160 1.00 55.15 C
ATOM 16 O2 C A 6 34.720 4.518 21.167 1.00 53.65 O
ATOM 17 N3 C A 6 33.396 6.082 22.127 1.00 56.02 N
ATOM 18 C4 C A 6 32.255 6.777 22.090 1.00 56.37 C
ATOM 19 N4 C A 6 32.030 7.661 23.070 1.00 56.67 N
ATOM 20 C5 C A 6 31.292 6.599 21.045 1.00 56.69 C
ATOM 21 C6 C A 6 31.569 5.697 20.088 1.00 56.34 C
ATOM 22 P A A 7 29.353 0.752 18.559 1.00 51.96 P
ATOM 23 OP1 A A 7 28.442 0.878 17.396 1.00 51.63 O
ATOM 24 OP2 A A 7 28.985 1.390 19.846 1.00 49.72 O
ATOM 25 O5' A A 7 29.632 -0.800 18.777 1.00 51.77 O
TER
ATOM 1 O3' C B 6 30.792 1.303 18.108 1.00 52.80 O
ATOM 2 P A B 7 29.353 0.752 18.559 1.00 51.96 P
ATOM 3 OP1 A B 7 28.442 0.878 17.396 1.00 51.63 O
ATOM 4 OP2 A B 7 28.985 1.390 19.846 1.00 49.72 O
ATOM 5 O5' A B 7 29.632 -0.800 18.777 1.00 51.77 O
ATOM 6 C5' A B 7 30.140 -1.580 17.697 1.00 51.55 C
ATOM 7 C4' A B 7 31.229 -2.519 18.172 1.00 50.22 C
ATOM 8 O4' A B 7 32.295 -1.769 18.816 1.00 47.94 O
ATOM 9 C3' A B 7 30.828 -3.528 19.230 1.00 50.05 C
ATOM 10 O3' A B 7 30.128 -4.618 18.658 1.00 50.94 O
ATOM 11 C2' A B 7 32.182 -3.920 19.799 1.00 48.09 C
ATOM 12 O2' A B 7 32.931 -4.775 18.958 1.00 47.52 O
ATOM 13 C1' A B 7 32.855 -2.553 19.860 1.00 45.77 C
ATOM 14 N9 A B 7 32.584 -1.892 21.136 1.00 41.40 N
ATOM 15 C8 A B 7 31.796 -0.800 21.410 1.00 39.46 C
ATOM 16 N7 A B 7 31.812 -0.442 22.672 1.00 36.30 N
ATOM 17 C5 A B 7 32.657 -1.368 23.266 1.00 36.14 C
ATOM 18 C6 A B 7 33.110 -1.523 24.581 1.00 35.34 C
ATOM 19 N6 A B 7 32.772 -0.710 25.582 1.00 34.00 N
ATOM 20 N1 A B 7 33.946 -2.551 24.838 1.00 36.43 N
ATOM 21 C2 A B 7 34.300 -3.359 23.830 1.00 39.11 C
ATOM 22 N3 A B 7 33.952 -3.309 22.552 1.00 37.32 N
ATOM 23 C4 A B 7 33.124 -2.276 22.335 1.00 38.10 C
ATOM 24 P U B 8 28.606 -4.886 19.090 1.00 53.37 P
ATOM 25 OP1 U B 8 28.042 -5.821 18.083 1.00 51.83 O
ATOM 26 OP2 U B 8 27.944 -3.575 19.338 1.00 48.66 O
ATOM 27 O5' U B 8 28.730 -5.623 20.496 1.00 53.06 O
TER
ATOM 2 P C A 6 30.627 4.344 13.640 1.00 43.81 P
ATOM 3 OP1 C A 6 30.364 3.020 13.023 1.00 39.25 O
ATOM 4 OP2 C A 6 29.497 5.267 13.920 1.00 40.02 O
ATOM 5 O5' C A 6 31.441 4.157 14.998 1.00 44.80 O
ATOM 6 C5' C A 6 30.778 3.839 16.218 1.00 48.84 C
ATOM 7 C4' C A 6 31.771 3.304 17.222 1.00 50.84 C
ATOM 8 O4' C A 6 32.522 4.394 17.826 1.00 53.03 O
ATOM 9 C3' C A 6 31.181 2.625 18.442 1.00 52.17 C
ATOM 10 O3' C A 6 30.792 1.303 18.108 1.00 52.80 O
ATOM 11 C2' C A 6 32.375 2.611 19.392 1.00 52.82 C
ATOM 12 O2' C A 6 33.298 1.570 19.116 1.00 52.35 O
ATOM 13 C1' C A 6 33.026 3.964 19.086 1.00 54.04 C
ATOM 14 N1 C A 6 32.730 4.975 20.117 1.00 55.49 N
ATOM 15 C2 C A 6 33.668 5.177 21.160 1.00 55.15 C
ATOM 16 O2 C A 6 34.720 4.518 21.167 1.00 53.65 O
ATOM 17 N3 C A 6 33.396 6.082 22.127 1.00 56.02 N
ATOM 18 C4 C A 6 32.255 6.777 22.090 1.00 56.37 C
ATOM 19 N4 C A 6 32.030 7.661 23.070 1.00 56.67 N
ATOM 20 C5 C A 6 31.292 6.599 21.045 1.00 56.69 C
ATOM 21 C6 C A 6 31.569 5.697 20.088 1.00 56.34 C
ATOM 22 P A A 7 29.353 0.752 18.559 1.00 51.96 P
ATOM 23 OP1 A A 7 28.442 0.878 17.396 1.00 51.63 O
ATOM 24 OP2 A A 7 28.985 1.390 19.846 1.00 49.72 O
ATOM 25 O5' A A 7 29.632 -0.800 18.777 1.00 51.77 O
TER
ATOM 1 O3' C B 6 30.792 1.303 18.108 1.00 52.80 O
ATOM 2 P A B 7 29.353 0.752 18.559 1.00 51.96 P
ATOM 3 OP1 A B 7 28.442 0.878 17.396 1.00 51.63 O
ATOM 4 OP2 A B 7 28.985 1.390 19.846 1.00 49.72 O
ATOM 5 O5' A B 7 29.632 -0.800 18.777 1.00 51.77 O
ATOM 6 C5' A B 7 30.140 -1.580 17.697 1.00 51.55 C
ATOM 7 C4' A B 7 31.229 -2.519 18.172 1.00 50.22 C
ATOM 8 O4' A B 7 32.295 -1.769 18.816 1.00 47.94 O
ATOM 9 C3' A B 7 30.828 -3.528 19.230 1.00 50.05 C
ATOM 10 O3' A B 7 30.128 -4.618 18.658 1.00 50.94 O
ATOM 11 C2' A B 7 32.182 -3.920 19.799 1.00 48.09 C
ATOM 12 O2' A B 7 32.931 -4.775 18.958 1.00 47.52 O
ATOM 13 C1' A B 7 32.855 -2.553 19.860 1.00 45.77 C
ATOM 14 N9 A B 7 32.584 -1.892 21.136 1.00 41.40 N
ATOM 15 C8 A B 7 31.796 -0.800 21.410 1.00 39.46 C
ATOM 16 N7 A B 7 31.812 -0.442 22.672 1.00 36.30 N
ATOM 17 C5 A B 7 32.657 -1.368 23.266 1.00 36.14 C
ATOM 18 C6 A B 7 33.110 -1.523 24.581 1.00 35.34 C
ATOM 19 N6 A B 7 32.772 -0.710 25.582 1.00 34.00 N
ATOM 20 N1 A B 7 33.946 -2.551 24.838 1.00 36.43 N
ATOM 21 C2 A B 7 34.300 -3.359 23.830 1.00 39.11 C
ATOM 22 N3 A B 7 33.952 -3.309 22.552 1.00 37.32 N
ATOM 23 C4 A B 7 33.124 -2.276 22.335 1.00 38.10 C
ATOM 24 P U B 8 28.606 -4.886 19.090 1.00 53.37 P
ATOM 25 OP1 U B 8 28.042 -5.821 18.083 1.00 51.83 O
ATOM 26 OP2 U B 8 27.944 -3.575 19.338 1.00 48.66 O
ATOM 27 O5' U B 8 28.730 -5.623 20.496 1.00 53.06 O
TER
Atoms:
C2: (33.668,5.177,21.160)
OP1: (30.364,3.020,13.023)
OP2: (29.497,5.267,13.920)
C4: (32.255,6.777,22.090)
O5': (31.441,4.157,14.998)
C3': (31.181,2.625,18.442)
C1': (33.026,3.964,19.086)
O4': (32.522,4.394,17.826)
C5': (30.778,3.839,16.218)
P: (30.627,4.344,13.640)
O2: (34.720,4.518,21.167)
C4': (31.771,3.304,17.222)
C2': (32.375,2.611,19.392)
O2': (33.298,1.570,19.116)
N1: (32.730,4.975,20.117)
N3: (33.396,6.082,22.127)
N4: (32.030,7.661,23.070)
C6: (31.569,5.697,20.088)
C5: (31.292,6.599,21.045)
O3': (30.792,1.303,18.108)
OP1: (30.364,3.020,13.023)
OP2: (29.497,5.267,13.920)
C4: (32.255,6.777,22.090)
O5': (31.441,4.157,14.998)
C3': (31.181,2.625,18.442)
C1': (33.026,3.964,19.086)
O4': (32.522,4.394,17.826)
C5': (30.778,3.839,16.218)
P: (30.627,4.344,13.640)
O2: (34.720,4.518,21.167)
C4': (31.771,3.304,17.222)
C2': (32.375,2.611,19.392)
O2': (33.298,1.570,19.116)
N1: (32.730,4.975,20.117)
N3: (33.396,6.082,22.127)
N4: (32.030,7.661,23.070)
C6: (31.569,5.697,20.088)
C5: (31.292,6.599,21.045)
O3': (30.792,1.303,18.108)
OP1: (28.442,0.878,17.396)
OP2: (28.985,1.390,19.846)
C3': (30.828,-3.528,19.230)
C1': (32.855,-2.553,19.860)
C5': (30.140,-1.580,17.697)
O4': (32.295,-1.769,18.816)
C8: (31.796,-0.800,21.410)
O2': (32.931,-4.775,18.958)
C6: (33.110,-1.523,24.581)
C5: (32.657,-1.368,23.266)
C4: (33.124,-2.276,22.335)
P: (29.353,0.752,18.559)
C4': (31.229,-2.519,18.172)
C2': (32.182,-3.920,19.799)
C2: (34.300,-3.359,23.830)
N1: (33.946,-2.551,24.838)
N3: (33.952,-3.309,22.552)
N6: (32.772,-0.710,25.582)
N7: (31.812,-0.442,22.672)
N9: (32.584,-1.892,21.136)
O5': (29.632,-0.800,18.777)
O3': (30.128,-4.618,18.658)
OP2: (28.985,1.390,19.846)
C3': (30.828,-3.528,19.230)
C1': (32.855,-2.553,19.860)
C5': (30.140,-1.580,17.697)
O4': (32.295,-1.769,18.816)
C8: (31.796,-0.800,21.410)
O2': (32.931,-4.775,18.958)
C6: (33.110,-1.523,24.581)
C5: (32.657,-1.368,23.266)
C4: (33.124,-2.276,22.335)
P: (29.353,0.752,18.559)
C4': (31.229,-2.519,18.172)
C2': (32.182,-3.920,19.799)
C2: (34.300,-3.359,23.830)
N1: (33.946,-2.551,24.838)
N3: (33.952,-3.309,22.552)
N6: (32.772,-0.710,25.582)
N7: (31.812,-0.442,22.672)
N9: (32.584,-1.892,21.136)
O5': (29.632,-0.800,18.777)
O3': (30.128,-4.618,18.658)
Image (generated by PyMOL):