ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1OOA:C8:C21

Extra

PDB:
ATOM 1 O3' G A 7 16.143 -28.934 26.830 1.00 24.19 O
ATOM 2 P A A 8 16.113 -29.935 25.598 1.00 30.89 P
ATOM 3 OP1 A A 8 14.836 -30.689 25.681 1.00 32.34 O
ATOM 4 OP2 A A 8 17.409 -30.663 25.625 1.00 35.40 O
ATOM 5 O5' A A 8 16.122 -28.972 24.332 1.00 25.22 O
ATOM 6 C5' A A 8 15.393 -29.303 23.153 1.00 37.76 C
ATOM 7 C4' A A 8 14.076 -28.560 23.132 1.00 39.45 C
ATOM 8 O4' A A 8 14.315 -27.138 23.289 1.00 39.16 O
ATOM 9 C3' A A 8 13.269 -28.687 21.851 1.00 33.17 C
ATOM 10 O3' A A 8 12.408 -29.808 21.949 1.00 35.33 O
ATOM 11 C2' A A 8 12.451 -27.407 21.866 1.00 29.00 C
ATOM 12 O2' A A 8 11.385 -27.520 22.789 1.00 28.06 O
ATOM 13 C1' A A 8 13.471 -26.414 22.418 1.00 36.22 C
ATOM 14 N9 A A 8 14.325 -25.781 21.416 1.00 36.99 N
ATOM 15 C8 A A 8 15.660 -26.018 21.214 1.00 26.41 C
ATOM 16 N7 A A 8 16.192 -25.283 20.278 1.00 41.92 N
ATOM 17 C5 A A 8 15.135 -24.509 19.822 1.00 47.99 C
ATOM 18 C6 A A 8 15.050 -23.516 18.833 1.00 46.63 C
ATOM 19 N6 A A 8 16.093 -23.119 18.097 1.00 43.15 N
ATOM 20 N1 A A 8 13.845 -22.940 18.624 1.00 45.38 N
ATOM 21 C2 A A 8 12.807 -23.342 19.366 1.00 39.17 C
ATOM 22 N3 A A 8 12.763 -24.259 20.328 1.00 41.10 N
ATOM 23 C4 A A 8 13.974 -24.813 20.509 1.00 42.19 C
ATOM 24 P A A 9 12.000 -30.608 20.630 1.00 38.67 P
ATOM 25 OP1 A A 9 10.856 -31.474 21.002 1.00 41.11 O
ATOM 26 OP2 A A 9 13.240 -31.217 20.081 1.00 45.25 O
ATOM 27 O5' A A 9 11.490 -29.480 19.631 1.00 41.05 O
TER

ATOM 1 O3' U B 20 17.574 -16.622 15.451 1.00 40.89 O
ATOM 2 P G B 21 18.274 -15.990 16.750 1.00 42.14 P
ATOM 3 OP1 G B 21 17.643 -14.665 16.998 1.00 55.61 O
ATOM 4 OP2 G B 21 19.748 -16.075 16.580 1.00 49.45 O
ATOM 5 O5' G B 21 17.837 -16.957 17.935 1.00 40.84 O
ATOM 6 C5' G B 21 16.542 -17.548 17.958 1.00 39.63 C
ATOM 7 C4' G B 21 16.621 -18.924 18.567 1.00 45.62 C
ATOM 8 O4' G B 21 17.613 -19.689 17.866 1.00 42.37 O
ATOM 9 C3' G B 21 17.001 -18.994 20.045 1.00 44.08 C
ATOM 10 O3' G B 21 15.734 -19.116 20.705 1.00 47.05 O
ATOM 11 C2' G B 21 17.753 -20.323 20.180 1.00 46.85 C
ATOM 12 O2' G B 21 16.899 -21.340 20.653 1.00 70.66 O
ATOM 13 C1' G B 21 18.084 -20.682 18.727 1.00 43.63 C
ATOM 14 N9 G B 21 19.413 -21.128 18.318 1.00 34.25 N
ATOM 15 C8 G B 21 20.449 -20.396 17.788 1.00 40.92 C
ATOM 16 N7 G B 21 21.472 -21.136 17.438 1.00 31.51 N
ATOM 17 C5 G B 21 21.093 -22.426 17.779 1.00 29.38 C
ATOM 18 C6 G B 21 21.783 -23.658 17.637 1.00 30.49 C
ATOM 19 O6 G B 21 22.913 -23.869 17.151 1.00 32.57 O
ATOM 20 N1 G B 21 21.027 -24.720 18.129 1.00 32.11 N
ATOM 21 C2 G B 21 19.765 -24.610 18.689 1.00 32.67 C
ATOM 22 N2 G B 21 19.194 -25.739 19.136 1.00 28.00 N
ATOM 23 N3 G B 21 19.116 -23.473 18.809 1.00 32.83 N
ATOM 24 C4 G B 21 19.832 -22.431 18.341 1.00 33.65 C
ATOM 25 P G B 22 15.568 -18.776 22.260 1.00 40.23 P
ATOM 26 OP1 G B 22 14.360 -17.916 22.325 1.00 50.77 O
ATOM 27 OP2 G B 22 16.853 -18.276 22.801 1.00 42.04 O
ATOM 28 O5' G B 22 15.216 -20.180 22.937 1.00 47.82 O
TER

Atoms:
OP1: (14.836,-30.689,25.681)
OP2: (17.409,-30.663,25.625)
C3': (13.269,-28.687,21.851)
C1': (13.471,-26.414,22.418)
C5': (15.393,-29.303,23.153)
O4': (14.315,-27.138,23.289)
C8: (15.660,-26.018,21.214)
O2': (11.385,-27.520,22.789)
C6: (15.050,-23.516,18.833)
C5: (15.135,-24.509,19.822)
C4: (13.974,-24.813,20.509)
P: (16.113,-29.935,25.598)
C4': (14.076,-28.560,23.132)
C2': (12.451,-27.407,21.866)
C2: (12.807,-23.342,19.366)
N1: (13.845,-22.940,18.624)
N3: (12.763,-24.259,20.328)
N6: (16.093,-23.119,18.097)
N7: (16.192,-25.283,20.278)
N9: (14.325,-25.781,21.416)
O5': (16.122,-28.972,24.332)
O3': (12.408,-29.808,21.949)
OP1: (17.643,-14.665,16.998)
OP2: (19.748,-16.075,16.580)
C3': (17.001,-18.994,20.045)
C1': (18.084,-20.682,18.727)
C5': (16.542,-17.548,17.958)
O6: (22.913,-23.869,17.151)
O4': (17.613,-19.689,17.866)
C8: (20.449,-20.396,17.788)
C2: (19.765,-24.610,18.689)
C6: (21.783,-23.658,17.637)
C5: (21.093,-22.426,17.779)
C4: (19.832,-22.431,18.341)
P: (18.274,-15.990,16.750)
C4': (16.621,-18.924,18.567)
C2': (17.753,-20.323,20.180)
O2': (16.899,-21.340,20.653)
N1: (21.027,-24.720,18.129)
N2: (19.194,-25.739,19.136)
N3: (19.116,-23.473,18.809)
N7: (21.472,-21.136,17.438)
N9: (19.413,-21.128,18.318)
O5': (17.837,-16.957,17.935)
O3': (15.734,-19.116,20.705)
Image (generated by PyMOL):
PyMOL image
show in jmol