ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A1969:A1970

Extra

PDB:
ATOM 1 O3' G A1968 -63.981 -9.944 -7.816 1.00 0.01 O
ATOM 2 P U A1969 -63.242 -11.204 -8.406 1.00 0.01 P
ATOM 3 OP1 U A1969 -63.226 -11.039 -9.880 1.00 0.01 O
ATOM 4 OP2 U A1969 -63.894 -12.395 -7.822 1.00 0.01 O
ATOM 5 O5' U A1969 -61.772 -11.037 -7.818 1.00 0.01 O
ATOM 6 C5' U A1969 -60.976 -9.936 -8.205 1.00 0.01 C
ATOM 7 C4' U A1969 -60.066 -9.496 -7.109 1.00 0.01 C
ATOM 8 O4' U A1969 -60.800 -9.413 -5.886 1.00 0.01 O
ATOM 9 C3' U A1969 -58.940 -10.434 -6.782 1.00 0.01 C
ATOM 10 O3' U A1969 -57.862 -10.316 -7.682 1.00 0.01 O
ATOM 11 C2' U A1969 -58.589 -10.041 -5.359 1.00 0.01 C
ATOM 12 O2' U A1969 -57.786 -8.889 -5.345 1.00 0.01 O
ATOM 13 C1' U A1969 -59.950 -9.674 -4.800 1.00 0.01 C
ATOM 14 N1 U A1969 -60.531 -10.745 -4.005 1.00 0.01 N
ATOM 15 C2 U A1969 -60.235 -10.815 -2.687 1.00 0.01 C
ATOM 16 O2 U A1969 -59.505 -10.039 -2.159 1.00 0.01 O
ATOM 17 N3 U A1969 -60.812 -11.825 -2.002 1.00 0.01 N
ATOM 18 C4 U A1969 -61.679 -12.753 -2.510 1.00 0.01 C
ATOM 19 O4 U A1969 -62.163 -13.612 -1.787 1.00 0.01 O
ATOM 20 C5 U A1969 -61.957 -12.617 -3.890 1.00 0.01 C
ATOM 21 C6 U A1969 -61.386 -11.628 -4.573 1.00 0.01 C
ATOM 22 P A A1970 -57.590 -11.458 -8.754 1.00 0.01 P
ATOM 23 OP1 A A1970 -58.217 -11.039 -10.005 1.00 0.01 O
ATOM 24 OP2 A A1970 -58.000 -12.727 -8.154 1.00 0.01 O
ATOM 25 O5' A A1970 -56.023 -11.418 -8.895 1.00 0.01 O
TER

ATOM 1 O3' U B1969 -57.862 -10.316 -7.682 1.00 0.01 O
ATOM 2 P A B1970 -57.590 -11.458 -8.754 1.00 0.01 P
ATOM 3 OP1 A B1970 -58.217 -11.039 -10.005 1.00 0.01 O
ATOM 4 OP2 A B1970 -58.000 -12.727 -8.154 1.00 0.01 O
ATOM 5 O5' A B1970 -56.023 -11.418 -8.895 1.00 0.01 O
ATOM 6 C5' A B1970 -55.378 -10.502 -9.754 1.00 0.01 C
ATOM 7 C4' A B1970 -54.080 -10.037 -9.158 1.00 0.01 C
ATOM 8 O4' A B1970 -54.361 -9.325 -7.944 1.00 0.01 O
ATOM 9 C3' A B1970 -53.118 -11.132 -8.737 1.00 0.01 C
ATOM 10 O3' A B1970 -52.314 -11.573 -9.784 1.00 0.01 O
ATOM 11 C2' A B1970 -52.331 -10.498 -7.616 1.00 0.01 C
ATOM 12 O2' A B1970 -51.282 -9.706 -8.117 1.00 0.01 O
ATOM 13 C1' A B1970 -53.384 -9.602 -6.976 1.00 0.01 C
ATOM 14 N9 A B1970 -54.034 -10.296 -5.875 1.00 0.01 N
ATOM 15 C8 A B1970 -55.292 -10.810 -5.787 1.00 0.01 C
ATOM 16 N7 A B1970 -55.495 -11.428 -4.655 1.00 0.01 N
ATOM 17 C5 A B1970 -54.274 -11.325 -4.011 1.00 0.01 C
ATOM 18 C6 A B1970 -53.835 -11.775 -2.781 1.00 0.01 C
ATOM 19 N6 A B1970 -54.574 -12.463 -1.926 1.00 0.01 N
ATOM 20 N1 A B1970 -52.572 -11.471 -2.475 1.00 0.01 N
ATOM 21 C2 A B1970 -51.806 -10.785 -3.333 1.00 0.01 C
ATOM 22 N3 A B1970 -52.100 -10.314 -4.526 1.00 0.01 N
ATOM 23 C4 A B1970 -53.364 -10.630 -4.767 1.00 0.01 C
ATOM 24 P A B1971 -52.161 -13.129 -10.059 1.00 0.01 P
ATOM 25 OP1 A B1971 -51.306 -13.278 -11.268 1.00 0.01 O
ATOM 26 OP2 A B1971 -53.518 -13.705 -10.058 1.00 0.01 O
ATOM 27 O5' A B1971 -51.382 -13.614 -8.791 1.00 0.01 O
TER

Atoms:
C4: (-61.679,-12.753,-2.510)
N3: (-60.812,-11.825,-2.002)
OP1: (-63.226,-11.039,-9.880)
OP2: (-63.894,-12.395,-7.822)
C2: (-60.235,-10.815,-2.687)
C1': (-59.950,-9.674,-4.800)
C3': (-58.940,-10.434,-6.782)
O5': (-61.772,-11.037,-7.818)
O4': (-60.800,-9.413,-5.886)
C5': (-60.976,-9.936,-8.205)
P: (-63.242,-11.204,-8.406)
C4': (-60.066,-9.496,-7.109)
C2': (-58.589,-10.041,-5.359)
O2': (-57.786,-8.889,-5.345)
N1: (-60.531,-10.745,-4.005)
O4: (-62.163,-13.612,-1.787)
O2: (-59.505,-10.039,-2.159)
C6: (-61.386,-11.628,-4.573)
C5: (-61.957,-12.617,-3.890)
O3': (-57.862,-10.316,-7.682)
OP1: (-58.217,-11.039,-10.005)
OP2: (-58.000,-12.727,-8.154)
C3': (-53.118,-11.132,-8.737)
C1': (-53.384,-9.602,-6.976)
C5': (-55.378,-10.502,-9.754)
O4': (-54.361,-9.325,-7.944)
C8: (-55.292,-10.810,-5.787)
O2': (-51.282,-9.706,-8.117)
C6: (-53.835,-11.775,-2.781)
C5: (-54.274,-11.325,-4.011)
C4: (-53.364,-10.630,-4.767)
P: (-57.590,-11.458,-8.754)
C4': (-54.080,-10.037,-9.158)
C2': (-52.331,-10.498,-7.616)
C2: (-51.806,-10.785,-3.333)
N1: (-52.572,-11.471,-2.475)
N3: (-52.100,-10.314,-4.526)
N6: (-54.574,-12.463,-1.926)
N7: (-55.495,-11.428,-4.655)
N9: (-54.034,-10.296,-5.875)
O5': (-56.023,-11.418,-8.895)
O3': (-52.314,-11.573,-9.784)
Image (generated by PyMOL):
PyMOL image
show in jmol