Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A222:A424
Extra
PDB:
ATOM 1 O3' U A 221 50.017 107.426 21.375 1.00 50.30 O
ATOM 2 P A A 222 49.947 107.624 19.807 1.00 51.46 P
ATOM 3 OP1 A A 222 48.968 108.718 19.593 1.00 51.21 O
ATOM 4 OP2 A A 222 49.727 106.296 19.184 1.00 51.37 O
ATOM 5 O5' A A 222 51.427 108.093 19.446 1.00 52.08 O
ATOM 6 C5' A A 222 51.887 109.407 19.791 1.00 52.64 C
ATOM 7 C4' A A 222 53.363 109.506 19.556 1.00 53.34 C
ATOM 8 O4' A A 222 54.014 108.433 20.287 1.00 54.22 O
ATOM 9 C3' A A 222 53.760 109.244 18.124 1.00 54.26 C
ATOM 10 O3' A A 222 53.665 110.399 17.327 1.00 56.74 O
ATOM 11 C2' A A 222 55.191 108.754 18.246 1.00 54.06 C
ATOM 12 O2' A A 222 56.120 109.802 18.388 1.00 55.29 O
ATOM 13 C1' A A 222 55.112 107.933 19.531 1.00 53.15 C
ATOM 14 N9 A A 222 54.894 106.513 19.273 1.00 51.60 N
ATOM 15 C8 A A 222 53.692 105.854 19.114 1.00 51.84 C
ATOM 16 N7 A A 222 53.823 104.569 18.917 1.00 53.16 N
ATOM 17 C5 A A 222 55.201 104.364 18.949 1.00 51.94 C
ATOM 18 C6 A A 222 55.992 103.199 18.825 1.00 52.69 C
ATOM 19 N6 A A 222 55.481 101.974 18.645 1.00 53.63 N
ATOM 20 N1 A A 222 57.335 103.338 18.900 1.00 51.57 N
ATOM 21 C2 A A 222 57.835 104.564 19.086 1.00 51.19 C
ATOM 22 N3 A A 222 57.197 105.731 19.226 1.00 50.73 N
ATOM 23 C4 A A 222 55.869 105.556 19.150 1.00 51.02 C
ATOM 24 P C A 223 53.817 110.250 15.745 1.00 59.83 P
ATOM 25 OP1 C A 223 53.604 111.575 15.098 1.00 57.70 O
ATOM 26 OP2 C A 223 52.953 109.094 15.382 1.00 61.26 O
ATOM 27 O5' C A 223 55.336 109.806 15.575 1.00 57.70 O
TER
ATOM 1 O3' A B 423 60.957 117.313 17.085 1.00 54.90 O
ATOM 2 P A B 424 60.208 117.140 18.484 1.00 55.43 P
ATOM 3 OP1 A B 424 59.340 118.317 18.729 1.00 56.01 O
ATOM 4 OP2 A B 424 61.203 116.727 19.511 1.00 54.39 O
ATOM 5 O5' A B 424 59.242 115.922 18.181 1.00 55.29 O
ATOM 6 C5' A B 424 58.080 116.098 17.367 1.00 53.14 C
ATOM 7 C4' A B 424 57.222 114.879 17.484 1.00 52.84 C
ATOM 8 O4' A B 424 57.962 113.752 16.953 1.00 51.44 O
ATOM 9 C3' A B 424 56.945 114.499 18.929 1.00 52.24 C
ATOM 10 O3' A B 424 55.819 115.194 19.455 1.00 53.61 O
ATOM 11 C2' A B 424 56.731 113.000 18.843 1.00 50.86 C
ATOM 12 O2' A B 424 55.433 112.698 18.364 1.00 51.54 O
ATOM 13 C1' A B 424 57.742 112.619 17.765 1.00 48.93 C
ATOM 14 N9 A B 424 59.037 112.175 18.252 1.00 45.44 N
ATOM 15 C8 A B 424 60.108 112.951 18.590 1.00 45.25 C
ATOM 16 N7 A B 424 61.191 112.263 18.870 1.00 45.42 N
ATOM 17 C5 A B 424 60.790 110.942 18.730 1.00 43.27 C
ATOM 18 C6 A B 424 61.480 109.724 18.858 1.00 42.56 C
ATOM 19 N6 A B 424 62.783 109.641 19.123 1.00 41.04 N
ATOM 20 N1 A B 424 60.778 108.586 18.684 1.00 42.20 N
ATOM 21 C2 A B 424 59.484 108.679 18.377 1.00 42.98 C
ATOM 22 N3 A B 424 58.731 109.764 18.200 1.00 42.85 N
ATOM 23 C4 A B 424 59.452 110.876 18.392 1.00 43.50 C
ATOM 24 P A B 425 55.723 115.465 21.035 1.00 54.91 P
ATOM 25 OP1 A B 425 54.529 116.319 21.288 1.00 54.71 O
ATOM 26 OP2 A B 425 57.052 115.897 21.532 1.00 55.61 O
ATOM 27 O5' A B 425 55.423 114.024 21.628 1.00 54.07 O
TER
ATOM 2 P A A 222 49.947 107.624 19.807 1.00 51.46 P
ATOM 3 OP1 A A 222 48.968 108.718 19.593 1.00 51.21 O
ATOM 4 OP2 A A 222 49.727 106.296 19.184 1.00 51.37 O
ATOM 5 O5' A A 222 51.427 108.093 19.446 1.00 52.08 O
ATOM 6 C5' A A 222 51.887 109.407 19.791 1.00 52.64 C
ATOM 7 C4' A A 222 53.363 109.506 19.556 1.00 53.34 C
ATOM 8 O4' A A 222 54.014 108.433 20.287 1.00 54.22 O
ATOM 9 C3' A A 222 53.760 109.244 18.124 1.00 54.26 C
ATOM 10 O3' A A 222 53.665 110.399 17.327 1.00 56.74 O
ATOM 11 C2' A A 222 55.191 108.754 18.246 1.00 54.06 C
ATOM 12 O2' A A 222 56.120 109.802 18.388 1.00 55.29 O
ATOM 13 C1' A A 222 55.112 107.933 19.531 1.00 53.15 C
ATOM 14 N9 A A 222 54.894 106.513 19.273 1.00 51.60 N
ATOM 15 C8 A A 222 53.692 105.854 19.114 1.00 51.84 C
ATOM 16 N7 A A 222 53.823 104.569 18.917 1.00 53.16 N
ATOM 17 C5 A A 222 55.201 104.364 18.949 1.00 51.94 C
ATOM 18 C6 A A 222 55.992 103.199 18.825 1.00 52.69 C
ATOM 19 N6 A A 222 55.481 101.974 18.645 1.00 53.63 N
ATOM 20 N1 A A 222 57.335 103.338 18.900 1.00 51.57 N
ATOM 21 C2 A A 222 57.835 104.564 19.086 1.00 51.19 C
ATOM 22 N3 A A 222 57.197 105.731 19.226 1.00 50.73 N
ATOM 23 C4 A A 222 55.869 105.556 19.150 1.00 51.02 C
ATOM 24 P C A 223 53.817 110.250 15.745 1.00 59.83 P
ATOM 25 OP1 C A 223 53.604 111.575 15.098 1.00 57.70 O
ATOM 26 OP2 C A 223 52.953 109.094 15.382 1.00 61.26 O
ATOM 27 O5' C A 223 55.336 109.806 15.575 1.00 57.70 O
TER
ATOM 1 O3' A B 423 60.957 117.313 17.085 1.00 54.90 O
ATOM 2 P A B 424 60.208 117.140 18.484 1.00 55.43 P
ATOM 3 OP1 A B 424 59.340 118.317 18.729 1.00 56.01 O
ATOM 4 OP2 A B 424 61.203 116.727 19.511 1.00 54.39 O
ATOM 5 O5' A B 424 59.242 115.922 18.181 1.00 55.29 O
ATOM 6 C5' A B 424 58.080 116.098 17.367 1.00 53.14 C
ATOM 7 C4' A B 424 57.222 114.879 17.484 1.00 52.84 C
ATOM 8 O4' A B 424 57.962 113.752 16.953 1.00 51.44 O
ATOM 9 C3' A B 424 56.945 114.499 18.929 1.00 52.24 C
ATOM 10 O3' A B 424 55.819 115.194 19.455 1.00 53.61 O
ATOM 11 C2' A B 424 56.731 113.000 18.843 1.00 50.86 C
ATOM 12 O2' A B 424 55.433 112.698 18.364 1.00 51.54 O
ATOM 13 C1' A B 424 57.742 112.619 17.765 1.00 48.93 C
ATOM 14 N9 A B 424 59.037 112.175 18.252 1.00 45.44 N
ATOM 15 C8 A B 424 60.108 112.951 18.590 1.00 45.25 C
ATOM 16 N7 A B 424 61.191 112.263 18.870 1.00 45.42 N
ATOM 17 C5 A B 424 60.790 110.942 18.730 1.00 43.27 C
ATOM 18 C6 A B 424 61.480 109.724 18.858 1.00 42.56 C
ATOM 19 N6 A B 424 62.783 109.641 19.123 1.00 41.04 N
ATOM 20 N1 A B 424 60.778 108.586 18.684 1.00 42.20 N
ATOM 21 C2 A B 424 59.484 108.679 18.377 1.00 42.98 C
ATOM 22 N3 A B 424 58.731 109.764 18.200 1.00 42.85 N
ATOM 23 C4 A B 424 59.452 110.876 18.392 1.00 43.50 C
ATOM 24 P A B 425 55.723 115.465 21.035 1.00 54.91 P
ATOM 25 OP1 A B 425 54.529 116.319 21.288 1.00 54.71 O
ATOM 26 OP2 A B 425 57.052 115.897 21.532 1.00 55.61 O
ATOM 27 O5' A B 425 55.423 114.024 21.628 1.00 54.07 O
TER
Atoms:
OP1: (48.968,108.718,19.593)
OP2: (49.727,106.296,19.184)
C3': (53.760,109.244,18.124)
C1': (55.112,107.933,19.531)
C5': (51.887,109.407,19.791)
O4': (54.014,108.433,20.287)
C8: (53.692,105.854,19.114)
O2': (56.120,109.802,18.388)
C6: (55.992,103.199,18.825)
C5: (55.201,104.364,18.949)
C4: (55.869,105.556,19.150)
P: (49.947,107.624,19.807)
C4': (53.363,109.506,19.556)
C2': (55.191,108.754,18.246)
C2: (57.835,104.564,19.086)
N1: (57.335,103.338,18.900)
N3: (57.197,105.731,19.226)
N6: (55.481,101.974,18.645)
N7: (53.823,104.569,18.917)
N9: (54.894,106.513,19.273)
O5': (51.427,108.093,19.446)
O3': (53.665,110.399,17.327)
OP2: (49.727,106.296,19.184)
C3': (53.760,109.244,18.124)
C1': (55.112,107.933,19.531)
C5': (51.887,109.407,19.791)
O4': (54.014,108.433,20.287)
C8: (53.692,105.854,19.114)
O2': (56.120,109.802,18.388)
C6: (55.992,103.199,18.825)
C5: (55.201,104.364,18.949)
C4: (55.869,105.556,19.150)
P: (49.947,107.624,19.807)
C4': (53.363,109.506,19.556)
C2': (55.191,108.754,18.246)
C2: (57.835,104.564,19.086)
N1: (57.335,103.338,18.900)
N3: (57.197,105.731,19.226)
N6: (55.481,101.974,18.645)
N7: (53.823,104.569,18.917)
N9: (54.894,106.513,19.273)
O5': (51.427,108.093,19.446)
O3': (53.665,110.399,17.327)
OP1: (59.340,118.317,18.729)
OP2: (61.203,116.727,19.511)
C3': (56.945,114.499,18.929)
C1': (57.742,112.619,17.765)
C5': (58.080,116.098,17.367)
O4': (57.962,113.752,16.953)
C8: (60.108,112.951,18.590)
O2': (55.433,112.698,18.364)
C6: (61.480,109.724,18.858)
C5: (60.790,110.942,18.730)
C4: (59.452,110.876,18.392)
P: (60.208,117.140,18.484)
C4': (57.222,114.879,17.484)
C2': (56.731,113.000,18.843)
C2: (59.484,108.679,18.377)
N1: (60.778,108.586,18.684)
N3: (58.731,109.764,18.200)
N6: (62.783,109.641,19.123)
N7: (61.191,112.263,18.870)
N9: (59.037,112.175,18.252)
O5': (59.242,115.922,18.181)
O3': (55.819,115.194,19.455)
OP2: (61.203,116.727,19.511)
C3': (56.945,114.499,18.929)
C1': (57.742,112.619,17.765)
C5': (58.080,116.098,17.367)
O4': (57.962,113.752,16.953)
C8: (60.108,112.951,18.590)
O2': (55.433,112.698,18.364)
C6: (61.480,109.724,18.858)
C5: (60.790,110.942,18.730)
C4: (59.452,110.876,18.392)
P: (60.208,117.140,18.484)
C4': (57.222,114.879,17.484)
C2': (56.731,113.000,18.843)
C2: (59.484,108.679,18.377)
N1: (60.778,108.586,18.684)
N3: (58.731,109.764,18.200)
N6: (62.783,109.641,19.123)
N7: (61.191,112.263,18.870)
N9: (59.037,112.175,18.252)
O5': (59.242,115.922,18.181)
O3': (55.819,115.194,19.455)
Image (generated by PyMOL):