ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1867:A2112

Extra

PDB:
ATOM 1 O3' G A1866 106.276 91.349 57.607 1.00 70.49 O
ATOM 2 P A A1867 105.966 90.179 56.516 1.00 69.48 P
ATOM 3 OP1 A A1867 105.026 89.172 57.110 1.00 67.39 O
ATOM 4 OP2 A A1867 107.269 89.718 55.957 1.00 69.59 O
ATOM 5 O5' A A1867 105.182 90.944 55.346 1.00 68.72 O
ATOM 6 C5' A A1867 103.875 91.507 55.572 1.00 67.79 C
ATOM 7 C4' A A1867 103.613 92.657 54.624 1.00 68.48 C
ATOM 8 O4' A A1867 104.496 93.783 54.881 1.00 69.58 O
ATOM 9 C3' A A1867 103.821 92.405 53.148 1.00 69.48 C
ATOM 10 O3' A A1867 102.732 91.694 52.617 1.00 69.69 O
ATOM 11 C2' A A1867 103.868 93.820 52.586 1.00 69.85 C
ATOM 12 O2' A A1867 102.572 94.365 52.471 1.00 69.90 O
ATOM 13 C1' A A1867 104.629 94.556 53.692 1.00 69.86 C
ATOM 14 N9 A A1867 106.053 94.733 53.403 1.00 70.02 N
ATOM 15 C8 A A1867 107.089 93.861 53.641 1.00 69.73 C
ATOM 16 N7 A A1867 108.263 94.325 53.285 1.00 71.03 N
ATOM 17 C5 A A1867 107.985 95.585 52.776 1.00 71.81 C
ATOM 18 C6 A A1867 108.812 96.600 52.244 1.00 73.29 C
ATOM 19 N6 A A1867 110.138 96.486 52.098 1.00 73.86 N
ATOM 20 N1 A A1867 108.218 97.751 51.849 1.00 74.51 N
ATOM 21 C2 A A1867 106.884 97.856 51.962 1.00 74.06 C
ATOM 22 N3 A A1867 106.003 96.968 52.432 1.00 72.32 N
ATOM 23 C4 A A1867 106.626 95.846 52.834 1.00 71.21 C
ATOM 24 P A A1868 102.937 90.810 51.296 1.00 69.51 P
ATOM 25 OP1 A A1868 101.702 89.985 51.186 1.00 68.56 O
ATOM 26 OP2 A A1868 104.272 90.149 51.333 1.00 69.84 O
ATOM 27 O5' A A1868 102.991 91.882 50.121 1.00 67.51 O
TER

ATOM 1 O3' U B2111 98.025 99.809 47.737 1.00 60.34 O
ATOM 2 P A B2112 97.617 99.528 49.293 1.00 61.51 P
ATOM 3 OP1 A B2112 96.618 98.423 49.332 1.00 60.84 O
ATOM 4 OP2 A B2112 97.304 100.815 49.968 1.00 60.62 O
ATOM 5 O5' A B2112 98.947 98.999 49.994 1.00 59.31 O
ATOM 6 C5' A B2112 99.413 97.661 49.803 1.00 57.23 C
ATOM 7 C4' A B2112 100.772 97.506 50.435 1.00 56.22 C
ATOM 8 O4' A B2112 101.691 98.470 49.848 1.00 55.51 O
ATOM 9 C3' A B2112 100.880 97.780 51.930 1.00 55.12 C
ATOM 10 O3' A B2112 100.503 96.673 52.748 1.00 56.51 O
ATOM 11 C2' A B2112 102.362 98.030 52.076 1.00 53.58 C
ATOM 12 O2' A B2112 103.034 96.800 51.966 1.00 53.08 O
ATOM 13 C1' A B2112 102.658 98.837 50.817 1.00 53.74 C
ATOM 14 N9 A B2112 102.629 100.290 51.002 1.00 53.55 N
ATOM 15 C8 A B2112 101.668 101.166 50.565 1.00 53.34 C
ATOM 16 N7 A B2112 101.956 102.425 50.791 1.00 54.65 N
ATOM 17 C5 A B2112 103.178 102.376 51.446 1.00 54.48 C
ATOM 18 C6 A B2112 104.027 103.385 51.937 1.00 55.24 C
ATOM 19 N6 A B2112 103.775 104.694 51.798 1.00 56.12 N
ATOM 20 N1 A B2112 105.161 103.002 52.558 1.00 55.14 N
ATOM 21 C2 A B2112 105.425 101.699 52.649 1.00 54.05 C
ATOM 22 N3 A B2112 104.721 100.657 52.208 1.00 52.64 N
ATOM 23 C4 A B2112 103.593 101.066 51.609 1.00 53.82 C
ATOM 24 P G B2113 99.835 96.943 54.187 1.00 57.51 P
ATOM 25 OP1 G B2113 98.950 95.810 54.531 1.00 54.73 O
ATOM 26 OP2 G B2113 99.270 98.308 54.087 1.00 58.94 O
ATOM 27 O5' G B2113 101.044 97.055 55.218 1.00 57.03 O
TER

Atoms:
OP1: (105.026,89.172,57.110)
OP2: (107.269,89.718,55.957)
C3': (103.821,92.405,53.148)
C1': (104.629,94.556,53.692)
C5': (103.875,91.507,55.572)
O4': (104.496,93.783,54.881)
C8: (107.089,93.861,53.641)
O2': (102.572,94.365,52.471)
C6: (108.812,96.600,52.244)
C5: (107.985,95.585,52.776)
C4: (106.626,95.846,52.834)
P: (105.966,90.179,56.516)
C4': (103.613,92.657,54.624)
C2': (103.868,93.820,52.586)
C2: (106.884,97.856,51.962)
N1: (108.218,97.751,51.849)
N3: (106.003,96.968,52.432)
N6: (110.138,96.486,52.098)
N7: (108.263,94.325,53.285)
N9: (106.053,94.733,53.403)
O5': (105.182,90.944,55.346)
O3': (102.732,91.694,52.617)
OP1: (96.618,98.423,49.332)
OP2: (97.304,100.815,49.968)
C3': (100.880,97.780,51.930)
C1': (102.658,98.837,50.817)
C5': (99.413,97.661,49.803)
O4': (101.691,98.470,49.848)
C8: (101.668,101.166,50.565)
O2': (103.034,96.800,51.966)
C6: (104.027,103.385,51.937)
C5: (103.178,102.376,51.446)
C4: (103.593,101.066,51.609)
P: (97.617,99.528,49.293)
C4': (100.772,97.506,50.435)
C2': (102.362,98.030,52.076)
C2: (105.425,101.699,52.649)
N1: (105.161,103.002,52.558)
N3: (104.721,100.657,52.208)
N6: (103.775,104.694,51.798)
N7: (101.956,102.425,50.791)
N9: (102.629,100.290,51.002)
O5': (98.947,98.999,49.994)
O3': (100.503,96.673,52.748)
Image (generated by PyMOL):
PyMOL image
show in jmol