ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M90:A222:A424

Extra

PDB:
ATOM 1 O3' U A 221 49.632 107.330 20.628 1.00 36.13 O
ATOM 2 P A A 222 49.468 107.473 19.042 1.00 35.79 P
ATOM 3 OP1 A A 222 48.472 108.551 18.842 1.00 32.99 O
ATOM 4 OP2 A A 222 49.245 106.139 18.440 1.00 37.51 O
ATOM 5 O5' A A 222 50.898 107.970 18.553 1.00 36.56 O
ATOM 6 C5' A A 222 51.442 109.214 19.012 1.00 37.07 C
ATOM 7 C4' A A 222 52.919 109.248 18.751 1.00 37.92 C
ATOM 8 O4' A A 222 53.560 108.190 19.507 1.00 39.44 O
ATOM 9 C3' A A 222 53.320 108.961 17.319 1.00 39.04 C
ATOM 10 O3' A A 222 53.167 110.133 16.534 1.00 42.84 O
ATOM 11 C2' A A 222 54.766 108.505 17.482 1.00 38.70 C
ATOM 12 O2' A A 222 55.664 109.580 17.679 1.00 38.43 O
ATOM 13 C1' A A 222 54.672 107.692 18.778 1.00 38.38 C
ATOM 14 N9 A A 222 54.478 106.257 18.561 1.00 35.14 N
ATOM 15 C8 A A 222 53.299 105.559 18.480 1.00 35.26 C
ATOM 16 N7 A A 222 53.459 104.273 18.278 1.00 34.14 N
ATOM 17 C5 A A 222 54.835 104.112 18.225 1.00 32.52 C
ATOM 18 C6 A A 222 55.651 102.981 18.046 1.00 32.50 C
ATOM 19 N6 A A 222 55.180 101.746 17.864 1.00 33.35 N
ATOM 20 N1 A A 222 56.991 103.164 18.054 1.00 31.96 N
ATOM 21 C2 A A 222 57.468 104.404 18.219 1.00 31.61 C
ATOM 22 N3 A A 222 56.804 105.545 18.395 1.00 32.75 N
ATOM 23 C4 A A 222 55.476 105.327 18.393 1.00 33.68 C
ATOM 24 P C A 223 53.339 110.060 14.940 1.00 44.69 P
ATOM 25 OP1 C A 223 53.186 111.455 14.446 1.00 46.66 O
ATOM 26 OP2 C A 223 52.479 108.991 14.388 1.00 45.05 O
ATOM 27 O5' C A 223 54.854 109.621 14.771 1.00 42.22 O
TER

ATOM 1 O3' A B 423 60.481 117.284 16.286 1.00 41.26 O
ATOM 2 P A B 424 59.658 117.194 17.657 1.00 42.13 P
ATOM 3 OP1 A B 424 58.834 118.421 17.747 1.00 44.43 O
ATOM 4 OP2 A B 424 60.596 116.860 18.759 1.00 43.96 O
ATOM 5 O5' A B 424 58.718 115.931 17.434 1.00 42.87 O
ATOM 6 C5' A B 424 57.539 116.003 16.624 1.00 40.39 C
ATOM 7 C4' A B 424 56.754 114.733 16.783 1.00 41.38 C
ATOM 8 O4' A B 424 57.517 113.633 16.234 1.00 40.72 O
ATOM 9 C3' A B 424 56.513 114.344 18.232 1.00 41.91 C
ATOM 10 O3' A B 424 55.348 114.991 18.718 1.00 44.35 O
ATOM 11 C2' A B 424 56.361 112.832 18.161 1.00 40.73 C
ATOM 12 O2' A B 424 55.067 112.454 17.747 1.00 40.61 O
ATOM 13 C1' A B 424 57.349 112.482 17.046 1.00 39.88 C
ATOM 14 N9 A B 424 58.676 112.033 17.463 1.00 38.94 N
ATOM 15 C8 A B 424 59.774 112.801 17.762 1.00 38.55 C
ATOM 16 N7 A B 424 60.856 112.101 18.000 1.00 39.19 N
ATOM 17 C5 A B 424 60.438 110.783 17.872 1.00 38.12 C
ATOM 18 C6 A B 424 61.119 109.553 17.987 1.00 37.71 C
ATOM 19 N6 A B 424 62.423 109.445 18.249 1.00 37.24 N
ATOM 20 N1 A B 424 60.405 108.422 17.815 1.00 37.07 N
ATOM 21 C2 A B 424 59.101 108.527 17.544 1.00 39.27 C
ATOM 22 N3 A B 424 58.351 109.621 17.401 1.00 39.77 N
ATOM 23 C4 A B 424 59.090 110.728 17.574 1.00 38.88 C
ATOM 24 P A B 425 55.195 115.272 20.284 1.00 48.75 P
ATOM 25 OP1 A B 425 53.990 116.119 20.454 1.00 47.92 O
ATOM 26 OP2 A B 425 56.496 115.719 20.846 1.00 48.36 O
ATOM 27 O5' A B 425 54.889 113.830 20.882 1.00 49.76 O
TER

Atoms:
OP1: (48.472,108.551,18.842)
OP2: (49.245,106.139,18.440)
C3': (53.320,108.961,17.319)
C1': (54.672,107.692,18.778)
C5': (51.442,109.214,19.012)
O4': (53.560,108.190,19.507)
C8: (53.299,105.559,18.480)
O2': (55.664,109.580,17.679)
C6: (55.651,102.981,18.046)
C5: (54.835,104.112,18.225)
C4: (55.476,105.327,18.393)
P: (49.468,107.473,19.042)
C4': (52.919,109.248,18.751)
C2': (54.766,108.505,17.482)
C2: (57.468,104.404,18.219)
N1: (56.991,103.164,18.054)
N3: (56.804,105.545,18.395)
N6: (55.180,101.746,17.864)
N7: (53.459,104.273,18.278)
N9: (54.478,106.257,18.561)
O5': (50.898,107.970,18.553)
O3': (53.167,110.133,16.534)
OP1: (58.834,118.421,17.747)
OP2: (60.596,116.860,18.759)
C3': (56.513,114.344,18.232)
C1': (57.349,112.482,17.046)
C5': (57.539,116.003,16.624)
O4': (57.517,113.633,16.234)
C8: (59.774,112.801,17.762)
O2': (55.067,112.454,17.747)
C6: (61.119,109.553,17.987)
C5: (60.438,110.783,17.872)
C4: (59.090,110.728,17.574)
P: (59.658,117.194,17.657)
C4': (56.754,114.733,16.783)
C2': (56.361,112.832,18.161)
C2: (59.101,108.527,17.544)
N1: (60.405,108.422,17.815)
N3: (58.351,109.621,17.401)
N6: (62.423,109.445,18.249)
N7: (60.856,112.101,18.000)
N9: (58.676,112.033,17.463)
O5': (58.718,115.931,17.434)
O3': (55.348,114.991,18.718)
Image (generated by PyMOL):
PyMOL image
show in jmol