ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N32:A119:A253

Extra

PDB:
ATOM 1 O3' G A 118 107.801 73.177 -25.116 1.00 48.14 O
ATOM 2 P A A 119 108.270 72.239 -26.361 1.00 37.74 P
ATOM 3 OP1 A A 119 109.477 72.825 -26.936 1.00 35.20 O
ATOM 4 OP2 A A 119 107.146 71.913 -27.244 1.00 35.20 O
ATOM 5 O5' A A 119 108.725 70.877 -25.677 1.00 46.34 O
ATOM 6 C5' A A 119 108.532 69.625 -26.355 1.00 46.34 C
ATOM 7 C4' A A 119 108.942 68.485 -25.466 1.00 46.34 C
ATOM 8 O4' A A 119 110.375 68.537 -25.264 1.00 46.34 O
ATOM 9 C3' A A 119 108.313 68.486 -24.084 1.00 46.34 C
ATOM 10 O3' A A 119 108.102 67.120 -23.729 1.00 46.34 O
ATOM 11 C2' A A 119 109.388 69.151 -23.224 1.00 46.34 C
ATOM 12 O2' A A 119 109.372 68.764 -21.870 1.00 46.34 O
ATOM 13 C1' A A 119 110.670 68.665 -23.891 1.00 46.34 C
ATOM 14 N9 A A 119 111.799 69.585 -23.779 1.00 49.15 N
ATOM 15 C8 A A 119 111.873 70.859 -24.283 1.00 49.15 C
ATOM 16 N7 A A 119 113.035 71.437 -24.098 1.00 49.15 N
ATOM 17 C5 A A 119 113.774 70.487 -23.409 1.00 49.15 C
ATOM 18 C6 A A 119 115.095 70.489 -22.925 1.00 49.15 C
ATOM 19 N6 A A 119 115.921 71.530 -23.052 1.00 49.15 N
ATOM 20 N1 A A 119 115.537 69.376 -22.295 1.00 49.15 N
ATOM 21 C2 A A 119 114.693 68.343 -22.155 1.00 49.15 C
ATOM 22 N3 A A 119 113.424 68.226 -22.557 1.00 49.15 N
ATOM 23 C4 A A 119 113.020 69.344 -23.190 1.00 49.15 C
ATOM 24 P C A 120 106.962 66.726 -22.669 1.00 45.80 P
ATOM 25 OP1 C A 120 106.952 65.251 -22.622 1.00 43.95 O
ATOM 26 OP2 C A 120 105.700 67.445 -22.969 1.00 43.95 O
ATOM 27 O5' C A 120 107.547 67.282 -21.295 1.00 41.44 O
TER

ATOM 1 O3' A B 252 109.394 59.783 -20.133 1.00 43.33 O
ATOM 2 P A B 253 109.929 59.714 -21.632 1.00 48.49 P
ATOM 3 OP1 A B 253 108.764 59.504 -22.540 1.00 45.57 O
ATOM 4 OP2 A B 253 111.060 58.759 -21.665 1.00 45.57 O
ATOM 5 O5' A B 253 110.505 61.183 -21.848 1.00 41.27 O
ATOM 6 C5' A B 253 109.615 62.317 -21.850 1.00 41.27 C
ATOM 7 C4' A B 253 110.381 63.594 -22.058 1.00 41.27 C
ATOM 8 O4' A B 253 111.042 63.985 -20.831 1.00 41.27 O
ATOM 9 C3' A B 253 111.471 63.555 -23.116 1.00 41.27 C
ATOM 10 O3' A B 253 110.918 63.808 -24.402 1.00 41.27 O
ATOM 11 C2' A B 253 112.390 64.683 -22.672 1.00 41.27 C
ATOM 12 O2' A B 253 111.886 65.928 -23.111 1.00 41.27 O
ATOM 13 C1' A B 253 112.271 64.615 -21.143 1.00 41.27 C
ATOM 14 N9 A B 253 113.351 63.857 -20.513 1.00 41.35 N
ATOM 15 C8 A B 253 113.527 62.496 -20.494 1.00 41.35 C
ATOM 16 N7 A B 253 114.619 62.110 -19.888 1.00 41.35 N
ATOM 17 C5 A B 253 115.196 63.294 -19.466 1.00 41.35 C
ATOM 18 C6 A B 253 116.373 63.563 -18.768 1.00 41.35 C
ATOM 19 N6 A B 253 117.213 62.622 -18.349 1.00 41.35 N
ATOM 20 N1 A B 253 116.664 64.851 -18.504 1.00 41.35 N
ATOM 21 C2 A B 253 115.814 65.798 -18.915 1.00 41.35 C
ATOM 22 N3 A B 253 114.671 65.670 -19.581 1.00 41.35 N
ATOM 23 C4 A B 253 114.419 64.377 -19.832 1.00 41.35 C
ATOM 24 P U B 254 111.750 63.427 -25.726 1.00 36.53 P
ATOM 25 OP1 U B 254 110.793 63.209 -26.847 1.00 57.29 O
ATOM 26 OP2 U B 254 112.720 62.366 -25.371 1.00 57.29 O
ATOM 27 O5' U B 254 112.594 64.732 -26.046 1.00 36.17 O
TER

Atoms:
OP1: (109.477,72.825,-26.936)
OP2: (107.146,71.913,-27.244)
C3': (108.313,68.486,-24.084)
C1': (110.670,68.665,-23.891)
C5': (108.532,69.625,-26.355)
O4': (110.375,68.537,-25.264)
C8: (111.873,70.859,-24.283)
O2': (109.372,68.764,-21.870)
C6: (115.095,70.489,-22.925)
C5: (113.774,70.487,-23.409)
C4: (113.020,69.344,-23.190)
P: (108.270,72.239,-26.361)
C4': (108.942,68.485,-25.466)
C2': (109.388,69.151,-23.224)
C2: (114.693,68.343,-22.155)
N1: (115.537,69.376,-22.295)
N3: (113.424,68.226,-22.557)
N6: (115.921,71.530,-23.052)
N7: (113.035,71.437,-24.098)
N9: (111.799,69.585,-23.779)
O5': (108.725,70.877,-25.677)
O3': (108.102,67.120,-23.729)
OP1: (108.764,59.504,-22.540)
OP2: (111.060,58.759,-21.665)
C3': (111.471,63.555,-23.116)
C1': (112.271,64.615,-21.143)
C5': (109.615,62.317,-21.850)
O4': (111.042,63.985,-20.831)
C8: (113.527,62.496,-20.494)
O2': (111.886,65.928,-23.111)
C6: (116.373,63.563,-18.768)
C5: (115.196,63.294,-19.466)
C4: (114.419,64.377,-19.832)
P: (109.929,59.714,-21.632)
C4': (110.381,63.594,-22.058)
C2': (112.390,64.683,-22.672)
C2: (115.814,65.798,-18.915)
N1: (116.664,64.851,-18.504)
N3: (114.671,65.670,-19.581)
N6: (117.213,62.622,-18.349)
N7: (114.619,62.110,-19.888)
N9: (113.351,63.857,-20.513)
O5': (110.505,61.183,-21.848)
O3': (110.918,63.808,-24.402)
Image (generated by PyMOL):
PyMOL image
show in jmol