Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.658 107.834 20.853 1.00 48.71 O
ATOM 2 P A A 222 49.460 107.996 19.264 1.00 50.88 P
ATOM 3 OP1 A A 222 48.472 109.097 19.105 1.00 47.24 O
ATOM 4 OP2 A A 222 49.195 106.665 18.647 1.00 49.22 O
ATOM 5 O5' A A 222 50.879 108.496 18.742 1.00 50.27 O
ATOM 6 C5' A A 222 51.444 109.734 19.219 1.00 50.63 C
ATOM 7 C4' A A 222 52.933 109.748 18.995 1.00 49.95 C
ATOM 8 O4' A A 222 53.553 108.677 19.750 1.00 49.43 O
ATOM 9 C3' A A 222 53.371 109.487 17.568 1.00 50.59 C
ATOM 10 O3' A A 222 53.270 110.679 16.800 1.00 55.50 O
ATOM 11 C2' A A 222 54.805 109.002 17.751 1.00 48.89 C
ATOM 12 O2' A A 222 55.723 110.054 17.962 1.00 49.54 O
ATOM 13 C1' A A 222 54.679 108.184 19.039 1.00 47.02 C
ATOM 14 N9 A A 222 54.483 106.759 18.791 1.00 42.34 N
ATOM 15 C8 A A 222 53.301 106.078 18.649 1.00 41.02 C
ATOM 16 N7 A A 222 53.458 104.798 18.414 1.00 40.88 N
ATOM 17 C5 A A 222 54.832 104.626 18.405 1.00 38.10 C
ATOM 18 C6 A A 222 55.634 103.500 18.215 1.00 38.72 C
ATOM 19 N6 A A 222 55.146 102.284 17.973 1.00 40.69 N
ATOM 20 N1 A A 222 56.975 103.662 18.279 1.00 40.08 N
ATOM 21 C2 A A 222 57.459 104.886 18.514 1.00 38.68 C
ATOM 22 N3 A A 222 56.804 106.025 18.704 1.00 39.31 N
ATOM 23 C4 A A 222 55.476 105.824 18.639 1.00 40.35 C
ATOM 24 P C A 223 53.469 110.623 15.207 1.00 58.23 P
ATOM 25 OP1 C A 223 53.401 112.029 14.720 1.00 58.91 O
ATOM 26 OP2 C A 223 52.563 109.599 14.626 1.00 57.15 O
ATOM 27 O5' C A 223 54.969 110.119 15.062 1.00 55.46 O
TER
ATOM 1 O3' A B 423 60.425 117.694 16.512 1.00 53.29 O
ATOM 2 P A B 424 59.676 117.611 17.922 1.00 55.84 P
ATOM 3 OP1 A B 424 58.864 118.845 18.076 1.00 57.34 O
ATOM 4 OP2 A B 424 60.685 117.261 18.958 1.00 56.61 O
ATOM 5 O5' A B 424 58.702 116.364 17.748 1.00 54.86 O
ATOM 6 C5' A B 424 57.538 116.433 16.907 1.00 52.46 C
ATOM 7 C4' A B 424 56.722 115.180 17.078 1.00 51.99 C
ATOM 8 O4' A B 424 57.452 114.061 16.523 1.00 50.26 O
ATOM 9 C3' A B 424 56.480 114.803 18.531 1.00 51.76 C
ATOM 10 O3' A B 424 55.334 115.487 19.016 1.00 53.84 O
ATOM 11 C2' A B 424 56.299 113.294 18.464 1.00 49.40 C
ATOM 12 O2' A B 424 55.000 112.949 18.040 1.00 49.98 O
ATOM 13 C1' A B 424 57.279 112.922 17.348 1.00 48.26 C
ATOM 14 N9 A B 424 58.610 112.461 17.741 1.00 45.78 N
ATOM 15 C8 A B 424 59.713 113.224 18.040 1.00 43.71 C
ATOM 16 N7 A B 424 60.801 112.522 18.239 1.00 42.90 N
ATOM 17 C5 A B 424 60.383 111.208 18.087 1.00 42.88 C
ATOM 18 C6 A B 424 61.068 109.976 18.164 1.00 42.55 C
ATOM 19 N6 A B 424 62.374 109.865 18.418 1.00 41.95 N
ATOM 20 N1 A B 424 60.354 108.847 17.969 1.00 42.26 N
ATOM 21 C2 A B 424 59.044 108.958 17.720 1.00 44.18 C
ATOM 22 N3 A B 424 58.290 110.054 17.620 1.00 43.26 N
ATOM 23 C4 A B 424 59.029 111.156 17.811 1.00 43.56 C
ATOM 24 P A B 425 55.205 115.816 20.579 1.00 57.59 P
ATOM 25 OP1 A B 425 53.993 116.662 20.761 1.00 55.80 O
ATOM 26 OP2 A B 425 56.517 116.292 21.093 1.00 57.84 O
ATOM 27 O5' A B 425 54.911 114.388 21.216 1.00 58.19 O
TER
ATOM 2 P A A 222 49.460 107.996 19.264 1.00 50.88 P
ATOM 3 OP1 A A 222 48.472 109.097 19.105 1.00 47.24 O
ATOM 4 OP2 A A 222 49.195 106.665 18.647 1.00 49.22 O
ATOM 5 O5' A A 222 50.879 108.496 18.742 1.00 50.27 O
ATOM 6 C5' A A 222 51.444 109.734 19.219 1.00 50.63 C
ATOM 7 C4' A A 222 52.933 109.748 18.995 1.00 49.95 C
ATOM 8 O4' A A 222 53.553 108.677 19.750 1.00 49.43 O
ATOM 9 C3' A A 222 53.371 109.487 17.568 1.00 50.59 C
ATOM 10 O3' A A 222 53.270 110.679 16.800 1.00 55.50 O
ATOM 11 C2' A A 222 54.805 109.002 17.751 1.00 48.89 C
ATOM 12 O2' A A 222 55.723 110.054 17.962 1.00 49.54 O
ATOM 13 C1' A A 222 54.679 108.184 19.039 1.00 47.02 C
ATOM 14 N9 A A 222 54.483 106.759 18.791 1.00 42.34 N
ATOM 15 C8 A A 222 53.301 106.078 18.649 1.00 41.02 C
ATOM 16 N7 A A 222 53.458 104.798 18.414 1.00 40.88 N
ATOM 17 C5 A A 222 54.832 104.626 18.405 1.00 38.10 C
ATOM 18 C6 A A 222 55.634 103.500 18.215 1.00 38.72 C
ATOM 19 N6 A A 222 55.146 102.284 17.973 1.00 40.69 N
ATOM 20 N1 A A 222 56.975 103.662 18.279 1.00 40.08 N
ATOM 21 C2 A A 222 57.459 104.886 18.514 1.00 38.68 C
ATOM 22 N3 A A 222 56.804 106.025 18.704 1.00 39.31 N
ATOM 23 C4 A A 222 55.476 105.824 18.639 1.00 40.35 C
ATOM 24 P C A 223 53.469 110.623 15.207 1.00 58.23 P
ATOM 25 OP1 C A 223 53.401 112.029 14.720 1.00 58.91 O
ATOM 26 OP2 C A 223 52.563 109.599 14.626 1.00 57.15 O
ATOM 27 O5' C A 223 54.969 110.119 15.062 1.00 55.46 O
TER
ATOM 1 O3' A B 423 60.425 117.694 16.512 1.00 53.29 O
ATOM 2 P A B 424 59.676 117.611 17.922 1.00 55.84 P
ATOM 3 OP1 A B 424 58.864 118.845 18.076 1.00 57.34 O
ATOM 4 OP2 A B 424 60.685 117.261 18.958 1.00 56.61 O
ATOM 5 O5' A B 424 58.702 116.364 17.748 1.00 54.86 O
ATOM 6 C5' A B 424 57.538 116.433 16.907 1.00 52.46 C
ATOM 7 C4' A B 424 56.722 115.180 17.078 1.00 51.99 C
ATOM 8 O4' A B 424 57.452 114.061 16.523 1.00 50.26 O
ATOM 9 C3' A B 424 56.480 114.803 18.531 1.00 51.76 C
ATOM 10 O3' A B 424 55.334 115.487 19.016 1.00 53.84 O
ATOM 11 C2' A B 424 56.299 113.294 18.464 1.00 49.40 C
ATOM 12 O2' A B 424 55.000 112.949 18.040 1.00 49.98 O
ATOM 13 C1' A B 424 57.279 112.922 17.348 1.00 48.26 C
ATOM 14 N9 A B 424 58.610 112.461 17.741 1.00 45.78 N
ATOM 15 C8 A B 424 59.713 113.224 18.040 1.00 43.71 C
ATOM 16 N7 A B 424 60.801 112.522 18.239 1.00 42.90 N
ATOM 17 C5 A B 424 60.383 111.208 18.087 1.00 42.88 C
ATOM 18 C6 A B 424 61.068 109.976 18.164 1.00 42.55 C
ATOM 19 N6 A B 424 62.374 109.865 18.418 1.00 41.95 N
ATOM 20 N1 A B 424 60.354 108.847 17.969 1.00 42.26 N
ATOM 21 C2 A B 424 59.044 108.958 17.720 1.00 44.18 C
ATOM 22 N3 A B 424 58.290 110.054 17.620 1.00 43.26 N
ATOM 23 C4 A B 424 59.029 111.156 17.811 1.00 43.56 C
ATOM 24 P A B 425 55.205 115.816 20.579 1.00 57.59 P
ATOM 25 OP1 A B 425 53.993 116.662 20.761 1.00 55.80 O
ATOM 26 OP2 A B 425 56.517 116.292 21.093 1.00 57.84 O
ATOM 27 O5' A B 425 54.911 114.388 21.216 1.00 58.19 O
TER
Atoms:
OP1: (48.472,109.097,19.105)
OP2: (49.195,106.665,18.647)
C3': (53.371,109.487,17.568)
C1': (54.679,108.184,19.039)
C5': (51.444,109.734,19.219)
O4': (53.553,108.677,19.750)
C8: (53.301,106.078,18.649)
O2': (55.723,110.054,17.962)
C6: (55.634,103.500,18.215)
C5: (54.832,104.626,18.405)
C4: (55.476,105.824,18.639)
P: (49.460,107.996,19.264)
C4': (52.933,109.748,18.995)
C2': (54.805,109.002,17.751)
C2: (57.459,104.886,18.514)
N1: (56.975,103.662,18.279)
N3: (56.804,106.025,18.704)
N6: (55.146,102.284,17.973)
N7: (53.458,104.798,18.414)
N9: (54.483,106.759,18.791)
O5': (50.879,108.496,18.742)
O3': (53.270,110.679,16.800)
OP2: (49.195,106.665,18.647)
C3': (53.371,109.487,17.568)
C1': (54.679,108.184,19.039)
C5': (51.444,109.734,19.219)
O4': (53.553,108.677,19.750)
C8: (53.301,106.078,18.649)
O2': (55.723,110.054,17.962)
C6: (55.634,103.500,18.215)
C5: (54.832,104.626,18.405)
C4: (55.476,105.824,18.639)
P: (49.460,107.996,19.264)
C4': (52.933,109.748,18.995)
C2': (54.805,109.002,17.751)
C2: (57.459,104.886,18.514)
N1: (56.975,103.662,18.279)
N3: (56.804,106.025,18.704)
N6: (55.146,102.284,17.973)
N7: (53.458,104.798,18.414)
N9: (54.483,106.759,18.791)
O5': (50.879,108.496,18.742)
O3': (53.270,110.679,16.800)
OP1: (58.864,118.845,18.076)
OP2: (60.685,117.261,18.958)
C3': (56.480,114.803,18.531)
C1': (57.279,112.922,17.348)
C5': (57.538,116.433,16.907)
O4': (57.452,114.061,16.523)
C8: (59.713,113.224,18.040)
O2': (55.000,112.949,18.040)
C6: (61.068,109.976,18.164)
C5: (60.383,111.208,18.087)
C4: (59.029,111.156,17.811)
P: (59.676,117.611,17.922)
C4': (56.722,115.180,17.078)
C2': (56.299,113.294,18.464)
C2: (59.044,108.958,17.720)
N1: (60.354,108.847,17.969)
N3: (58.290,110.054,17.620)
N6: (62.374,109.865,18.418)
N7: (60.801,112.522,18.239)
N9: (58.610,112.461,17.741)
O5': (58.702,116.364,17.748)
O3': (55.334,115.487,19.016)
OP2: (60.685,117.261,18.958)
C3': (56.480,114.803,18.531)
C1': (57.279,112.922,17.348)
C5': (57.538,116.433,16.907)
O4': (57.452,114.061,16.523)
C8: (59.713,113.224,18.040)
O2': (55.000,112.949,18.040)
C6: (61.068,109.976,18.164)
C5: (60.383,111.208,18.087)
C4: (59.029,111.156,17.811)
P: (59.676,117.611,17.922)
C4': (56.722,115.180,17.078)
C2': (56.299,113.294,18.464)
C2: (59.044,108.958,17.720)
N1: (60.354,108.847,17.969)
N3: (58.290,110.054,17.620)
N6: (62.374,109.865,18.418)
N7: (60.801,112.522,18.239)
N9: (58.610,112.461,17.741)
O5': (58.702,116.364,17.748)
O3': (55.334,115.487,19.016)
Image (generated by PyMOL):