Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.746 107.698 20.847 1.00 51.90 O
ATOM 2 P A A 222 49.563 107.877 19.262 1.00 51.36 P
ATOM 3 OP1 A A 222 48.605 109.010 19.102 1.00 49.91 O
ATOM 4 OP2 A A 222 49.263 106.560 18.639 1.00 51.03 O
ATOM 5 O5' A A 222 51.006 108.328 18.758 1.00 51.29 O
ATOM 6 C5' A A 222 51.570 109.584 19.186 1.00 51.35 C
ATOM 7 C4' A A 222 53.058 109.595 18.964 1.00 49.76 C
ATOM 8 O4' A A 222 53.656 108.496 19.697 1.00 49.62 O
ATOM 9 C3' A A 222 53.506 109.355 17.538 1.00 51.62 C
ATOM 10 O3' A A 222 53.415 110.538 16.758 1.00 56.47 O
ATOM 11 C2' A A 222 54.937 108.864 17.726 1.00 49.46 C
ATOM 12 O2' A A 222 55.868 109.902 17.953 1.00 47.40 O
ATOM 13 C1' A A 222 54.793 108.022 18.995 1.00 48.47 C
ATOM 14 N9 A A 222 54.611 106.601 18.717 1.00 44.81 N
ATOM 15 C8 A A 222 53.444 105.894 18.561 1.00 44.72 C
ATOM 16 N7 A A 222 53.632 104.619 18.317 1.00 44.71 N
ATOM 17 C5 A A 222 55.012 104.480 18.314 1.00 42.18 C
ATOM 18 C6 A A 222 55.847 103.374 18.123 1.00 42.45 C
ATOM 19 N6 A A 222 55.395 102.144 17.880 1.00 43.67 N
ATOM 20 N1 A A 222 57.185 103.575 18.188 1.00 42.59 N
ATOM 21 C2 A A 222 57.633 104.811 18.425 1.00 41.89 C
ATOM 22 N3 A A 222 56.945 105.931 18.621 1.00 41.72 N
ATOM 23 C4 A A 222 55.625 105.693 18.554 1.00 42.61 C
ATOM 24 P C A 223 53.663 110.468 15.169 1.00 59.53 P
ATOM 25 OP1 C A 223 53.636 111.874 14.679 1.00 60.83 O
ATOM 26 OP2 C A 223 52.745 109.460 14.569 1.00 60.10 O
ATOM 27 O5' C A 223 55.151 109.919 15.063 1.00 56.79 O
TER
ATOM 1 O3' A B 423 60.673 117.547 16.450 1.00 56.49 O
ATOM 2 P A B 424 59.860 117.454 17.826 1.00 57.06 P
ATOM 3 OP1 A B 424 59.018 118.674 17.934 1.00 59.47 O
ATOM 4 OP2 A B 424 60.832 117.132 18.904 1.00 58.04 O
ATOM 5 O5' A B 424 58.912 116.194 17.610 1.00 57.67 O
ATOM 6 C5' A B 424 57.718 116.282 16.817 1.00 54.50 C
ATOM 7 C4' A B 424 56.900 115.036 17.005 1.00 54.30 C
ATOM 8 O4' A B 424 57.618 113.912 16.443 1.00 53.55 O
ATOM 9 C3' A B 424 56.676 114.662 18.460 1.00 54.26 C
ATOM 10 O3' A B 424 55.549 115.359 18.975 1.00 56.48 O
ATOM 11 C2' A B 424 56.479 113.155 18.393 1.00 52.92 C
ATOM 12 O2' A B 424 55.177 112.814 17.975 1.00 50.83 O
ATOM 13 C1' A B 424 57.454 112.775 17.274 1.00 52.32 C
ATOM 14 N9 A B 424 58.789 112.338 17.682 1.00 51.36 N
ATOM 15 C8 A B 424 59.866 113.129 18.001 1.00 49.81 C
ATOM 16 N7 A B 424 60.967 112.454 18.223 1.00 50.49 N
ATOM 17 C5 A B 424 60.587 111.129 18.063 1.00 49.98 C
ATOM 18 C6 A B 424 61.305 109.918 18.150 1.00 49.94 C
ATOM 19 N6 A B 424 62.609 109.844 18.423 1.00 49.10 N
ATOM 20 N1 A B 424 60.626 108.769 17.941 1.00 49.95 N
ATOM 21 C2 A B 424 59.319 108.842 17.663 1.00 51.28 C
ATOM 22 N3 A B 424 58.537 109.917 17.549 1.00 50.93 N
ATOM 23 C4 A B 424 59.241 111.041 17.758 1.00 50.65 C
ATOM 24 P A B 425 55.443 115.645 20.548 1.00 59.54 P
ATOM 25 OP1 A B 425 54.261 116.512 20.774 1.00 58.55 O
ATOM 26 OP2 A B 425 56.772 116.072 21.049 1.00 61.50 O
ATOM 27 O5' A B 425 55.131 114.210 21.160 1.00 60.37 O
TER
ATOM 2 P A A 222 49.563 107.877 19.262 1.00 51.36 P
ATOM 3 OP1 A A 222 48.605 109.010 19.102 1.00 49.91 O
ATOM 4 OP2 A A 222 49.263 106.560 18.639 1.00 51.03 O
ATOM 5 O5' A A 222 51.006 108.328 18.758 1.00 51.29 O
ATOM 6 C5' A A 222 51.570 109.584 19.186 1.00 51.35 C
ATOM 7 C4' A A 222 53.058 109.595 18.964 1.00 49.76 C
ATOM 8 O4' A A 222 53.656 108.496 19.697 1.00 49.62 O
ATOM 9 C3' A A 222 53.506 109.355 17.538 1.00 51.62 C
ATOM 10 O3' A A 222 53.415 110.538 16.758 1.00 56.47 O
ATOM 11 C2' A A 222 54.937 108.864 17.726 1.00 49.46 C
ATOM 12 O2' A A 222 55.868 109.902 17.953 1.00 47.40 O
ATOM 13 C1' A A 222 54.793 108.022 18.995 1.00 48.47 C
ATOM 14 N9 A A 222 54.611 106.601 18.717 1.00 44.81 N
ATOM 15 C8 A A 222 53.444 105.894 18.561 1.00 44.72 C
ATOM 16 N7 A A 222 53.632 104.619 18.317 1.00 44.71 N
ATOM 17 C5 A A 222 55.012 104.480 18.314 1.00 42.18 C
ATOM 18 C6 A A 222 55.847 103.374 18.123 1.00 42.45 C
ATOM 19 N6 A A 222 55.395 102.144 17.880 1.00 43.67 N
ATOM 20 N1 A A 222 57.185 103.575 18.188 1.00 42.59 N
ATOM 21 C2 A A 222 57.633 104.811 18.425 1.00 41.89 C
ATOM 22 N3 A A 222 56.945 105.931 18.621 1.00 41.72 N
ATOM 23 C4 A A 222 55.625 105.693 18.554 1.00 42.61 C
ATOM 24 P C A 223 53.663 110.468 15.169 1.00 59.53 P
ATOM 25 OP1 C A 223 53.636 111.874 14.679 1.00 60.83 O
ATOM 26 OP2 C A 223 52.745 109.460 14.569 1.00 60.10 O
ATOM 27 O5' C A 223 55.151 109.919 15.063 1.00 56.79 O
TER
ATOM 1 O3' A B 423 60.673 117.547 16.450 1.00 56.49 O
ATOM 2 P A B 424 59.860 117.454 17.826 1.00 57.06 P
ATOM 3 OP1 A B 424 59.018 118.674 17.934 1.00 59.47 O
ATOM 4 OP2 A B 424 60.832 117.132 18.904 1.00 58.04 O
ATOM 5 O5' A B 424 58.912 116.194 17.610 1.00 57.67 O
ATOM 6 C5' A B 424 57.718 116.282 16.817 1.00 54.50 C
ATOM 7 C4' A B 424 56.900 115.036 17.005 1.00 54.30 C
ATOM 8 O4' A B 424 57.618 113.912 16.443 1.00 53.55 O
ATOM 9 C3' A B 424 56.676 114.662 18.460 1.00 54.26 C
ATOM 10 O3' A B 424 55.549 115.359 18.975 1.00 56.48 O
ATOM 11 C2' A B 424 56.479 113.155 18.393 1.00 52.92 C
ATOM 12 O2' A B 424 55.177 112.814 17.975 1.00 50.83 O
ATOM 13 C1' A B 424 57.454 112.775 17.274 1.00 52.32 C
ATOM 14 N9 A B 424 58.789 112.338 17.682 1.00 51.36 N
ATOM 15 C8 A B 424 59.866 113.129 18.001 1.00 49.81 C
ATOM 16 N7 A B 424 60.967 112.454 18.223 1.00 50.49 N
ATOM 17 C5 A B 424 60.587 111.129 18.063 1.00 49.98 C
ATOM 18 C6 A B 424 61.305 109.918 18.150 1.00 49.94 C
ATOM 19 N6 A B 424 62.609 109.844 18.423 1.00 49.10 N
ATOM 20 N1 A B 424 60.626 108.769 17.941 1.00 49.95 N
ATOM 21 C2 A B 424 59.319 108.842 17.663 1.00 51.28 C
ATOM 22 N3 A B 424 58.537 109.917 17.549 1.00 50.93 N
ATOM 23 C4 A B 424 59.241 111.041 17.758 1.00 50.65 C
ATOM 24 P A B 425 55.443 115.645 20.548 1.00 59.54 P
ATOM 25 OP1 A B 425 54.261 116.512 20.774 1.00 58.55 O
ATOM 26 OP2 A B 425 56.772 116.072 21.049 1.00 61.50 O
ATOM 27 O5' A B 425 55.131 114.210 21.160 1.00 60.37 O
TER
Atoms:
OP1: (48.605,109.010,19.102)
OP2: (49.263,106.560,18.639)
C3': (53.506,109.355,17.538)
C1': (54.793,108.022,18.995)
C5': (51.570,109.584,19.186)
O4': (53.656,108.496,19.697)
C8: (53.444,105.894,18.561)
O2': (55.868,109.902,17.953)
C6: (55.847,103.374,18.123)
C5: (55.012,104.480,18.314)
C4: (55.625,105.693,18.554)
P: (49.563,107.877,19.262)
C4': (53.058,109.595,18.964)
C2': (54.937,108.864,17.726)
C2: (57.633,104.811,18.425)
N1: (57.185,103.575,18.188)
N3: (56.945,105.931,18.621)
N6: (55.395,102.144,17.880)
N7: (53.632,104.619,18.317)
N9: (54.611,106.601,18.717)
O5': (51.006,108.328,18.758)
O3': (53.415,110.538,16.758)
OP2: (49.263,106.560,18.639)
C3': (53.506,109.355,17.538)
C1': (54.793,108.022,18.995)
C5': (51.570,109.584,19.186)
O4': (53.656,108.496,19.697)
C8: (53.444,105.894,18.561)
O2': (55.868,109.902,17.953)
C6: (55.847,103.374,18.123)
C5: (55.012,104.480,18.314)
C4: (55.625,105.693,18.554)
P: (49.563,107.877,19.262)
C4': (53.058,109.595,18.964)
C2': (54.937,108.864,17.726)
C2: (57.633,104.811,18.425)
N1: (57.185,103.575,18.188)
N3: (56.945,105.931,18.621)
N6: (55.395,102.144,17.880)
N7: (53.632,104.619,18.317)
N9: (54.611,106.601,18.717)
O5': (51.006,108.328,18.758)
O3': (53.415,110.538,16.758)
OP1: (59.018,118.674,17.934)
OP2: (60.832,117.132,18.904)
C3': (56.676,114.662,18.460)
C1': (57.454,112.775,17.274)
C5': (57.718,116.282,16.817)
O4': (57.618,113.912,16.443)
C8: (59.866,113.129,18.001)
O2': (55.177,112.814,17.975)
C6: (61.305,109.918,18.150)
C5: (60.587,111.129,18.063)
C4: (59.241,111.041,17.758)
P: (59.860,117.454,17.826)
C4': (56.900,115.036,17.005)
C2': (56.479,113.155,18.393)
C2: (59.319,108.842,17.663)
N1: (60.626,108.769,17.941)
N3: (58.537,109.917,17.549)
N6: (62.609,109.844,18.423)
N7: (60.967,112.454,18.223)
N9: (58.789,112.338,17.682)
O5': (58.912,116.194,17.610)
O3': (55.549,115.359,18.975)
OP2: (60.832,117.132,18.904)
C3': (56.676,114.662,18.460)
C1': (57.454,112.775,17.274)
C5': (57.718,116.282,16.817)
O4': (57.618,113.912,16.443)
C8: (59.866,113.129,18.001)
O2': (55.177,112.814,17.975)
C6: (61.305,109.918,18.150)
C5: (60.587,111.129,18.063)
C4: (59.241,111.041,17.758)
P: (59.860,117.454,17.826)
C4': (56.900,115.036,17.005)
C2': (56.479,113.155,18.393)
C2: (59.319,108.842,17.663)
N1: (60.626,108.769,17.941)
N3: (58.537,109.917,17.549)
N6: (62.609,109.844,18.423)
N7: (60.967,112.454,18.223)
N9: (58.789,112.338,17.682)
O5': (58.912,116.194,17.610)
O3': (55.549,115.359,18.975)
Image (generated by PyMOL):