Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.433 107.560 20.637 1.00 44.69 O
ATOM 2 P A A 222 49.286 107.760 19.049 1.00 45.05 P
ATOM 3 OP1 A A 222 48.331 108.882 18.871 1.00 41.14 O
ATOM 4 OP2 A A 222 49.016 106.443 18.415 1.00 46.96 O
ATOM 5 O5' A A 222 50.732 108.222 18.570 1.00 45.29 O
ATOM 6 C5' A A 222 51.298 109.455 19.042 1.00 45.99 C
ATOM 7 C4' A A 222 52.779 109.462 18.807 1.00 45.08 C
ATOM 8 O4' A A 222 53.390 108.370 19.539 1.00 44.88 O
ATOM 9 C3' A A 222 53.191 109.200 17.375 1.00 45.93 C
ATOM 10 O3' A A 222 53.067 110.387 16.609 1.00 50.44 O
ATOM 11 C2' A A 222 54.626 108.712 17.536 1.00 44.27 C
ATOM 12 O2' A A 222 55.552 109.760 17.750 1.00 43.03 O
ATOM 13 C1' A A 222 54.510 107.882 18.818 1.00 43.11 C
ATOM 14 N9 A A 222 54.316 106.456 18.574 1.00 40.06 N
ATOM 15 C8 A A 222 53.139 105.755 18.476 1.00 40.20 C
ATOM 16 N7 A A 222 53.306 104.474 18.240 1.00 39.75 N
ATOM 17 C5 A A 222 54.683 104.323 18.183 1.00 38.77 C
ATOM 18 C6 A A 222 55.500 103.207 17.967 1.00 39.18 C
ATOM 19 N6 A A 222 55.028 101.980 17.749 1.00 41.41 N
ATOM 20 N1 A A 222 56.839 103.395 17.977 1.00 40.75 N
ATOM 21 C2 A A 222 57.309 104.632 18.186 1.00 40.27 C
ATOM 22 N3 A A 222 56.640 105.762 18.399 1.00 37.65 N
ATOM 23 C4 A A 222 55.317 105.536 18.387 1.00 39.08 C
ATOM 24 P C A 223 53.199 110.320 15.010 1.00 52.79 P
ATOM 25 OP1 C A 223 52.970 111.706 14.511 1.00 54.09 O
ATOM 26 OP2 C A 223 52.376 109.198 14.478 1.00 52.42 O
ATOM 27 O5' C A 223 54.728 109.946 14.806 1.00 50.45 O
TER
ATOM 1 O3' A B 423 60.284 117.482 16.269 1.00 48.64 O
ATOM 2 P A B 424 59.552 117.389 17.688 1.00 49.35 P
ATOM 3 OP1 A B 424 58.749 118.629 17.866 1.00 51.83 O
ATOM 4 OP2 A B 424 60.567 117.012 18.713 1.00 50.24 O
ATOM 5 O5' A B 424 58.564 116.155 17.517 1.00 50.91 O
ATOM 6 C5' A B 424 57.398 116.228 16.685 1.00 48.22 C
ATOM 7 C4' A B 424 56.608 114.956 16.829 1.00 49.06 C
ATOM 8 O4' A B 424 57.376 113.859 16.279 1.00 47.91 O
ATOM 9 C3' A B 424 56.354 114.554 18.273 1.00 49.98 C
ATOM 10 O3' A B 424 55.196 115.215 18.763 1.00 53.21 O
ATOM 11 C2' A B 424 56.186 113.045 18.178 1.00 48.88 C
ATOM 12 O2' A B 424 54.895 112.685 17.734 1.00 48.30 O
ATOM 13 C1' A B 424 57.187 112.699 17.071 1.00 47.72 C
ATOM 14 N9 A B 424 58.508 112.220 17.481 1.00 46.76 N
ATOM 15 C8 A B 424 59.619 112.967 17.789 1.00 45.78 C
ATOM 16 N7 A B 424 60.695 112.247 18.002 1.00 46.57 N
ATOM 17 C5 A B 424 60.257 110.938 17.851 1.00 45.34 C
ATOM 18 C6 A B 424 60.922 109.694 17.936 1.00 45.99 C
ATOM 19 N6 A B 424 62.225 109.561 18.195 1.00 44.57 N
ATOM 20 N1 A B 424 60.191 108.576 17.739 1.00 45.81 N
ATOM 21 C2 A B 424 58.885 108.707 17.480 1.00 47.32 C
ATOM 22 N3 A B 424 58.149 109.815 17.371 1.00 46.70 N
ATOM 23 C4 A B 424 58.904 110.907 17.564 1.00 45.86 C
ATOM 24 P A B 425 55.075 115.557 20.324 1.00 55.84 P
ATOM 25 OP1 A B 425 53.886 116.435 20.494 1.00 54.58 O
ATOM 26 OP2 A B 425 56.400 116.005 20.830 1.00 56.17 O
ATOM 27 O5' A B 425 54.755 114.142 20.978 1.00 56.76 O
TER
ATOM 2 P A A 222 49.286 107.760 19.049 1.00 45.05 P
ATOM 3 OP1 A A 222 48.331 108.882 18.871 1.00 41.14 O
ATOM 4 OP2 A A 222 49.016 106.443 18.415 1.00 46.96 O
ATOM 5 O5' A A 222 50.732 108.222 18.570 1.00 45.29 O
ATOM 6 C5' A A 222 51.298 109.455 19.042 1.00 45.99 C
ATOM 7 C4' A A 222 52.779 109.462 18.807 1.00 45.08 C
ATOM 8 O4' A A 222 53.390 108.370 19.539 1.00 44.88 O
ATOM 9 C3' A A 222 53.191 109.200 17.375 1.00 45.93 C
ATOM 10 O3' A A 222 53.067 110.387 16.609 1.00 50.44 O
ATOM 11 C2' A A 222 54.626 108.712 17.536 1.00 44.27 C
ATOM 12 O2' A A 222 55.552 109.760 17.750 1.00 43.03 O
ATOM 13 C1' A A 222 54.510 107.882 18.818 1.00 43.11 C
ATOM 14 N9 A A 222 54.316 106.456 18.574 1.00 40.06 N
ATOM 15 C8 A A 222 53.139 105.755 18.476 1.00 40.20 C
ATOM 16 N7 A A 222 53.306 104.474 18.240 1.00 39.75 N
ATOM 17 C5 A A 222 54.683 104.323 18.183 1.00 38.77 C
ATOM 18 C6 A A 222 55.500 103.207 17.967 1.00 39.18 C
ATOM 19 N6 A A 222 55.028 101.980 17.749 1.00 41.41 N
ATOM 20 N1 A A 222 56.839 103.395 17.977 1.00 40.75 N
ATOM 21 C2 A A 222 57.309 104.632 18.186 1.00 40.27 C
ATOM 22 N3 A A 222 56.640 105.762 18.399 1.00 37.65 N
ATOM 23 C4 A A 222 55.317 105.536 18.387 1.00 39.08 C
ATOM 24 P C A 223 53.199 110.320 15.010 1.00 52.79 P
ATOM 25 OP1 C A 223 52.970 111.706 14.511 1.00 54.09 O
ATOM 26 OP2 C A 223 52.376 109.198 14.478 1.00 52.42 O
ATOM 27 O5' C A 223 54.728 109.946 14.806 1.00 50.45 O
TER
ATOM 1 O3' A B 423 60.284 117.482 16.269 1.00 48.64 O
ATOM 2 P A B 424 59.552 117.389 17.688 1.00 49.35 P
ATOM 3 OP1 A B 424 58.749 118.629 17.866 1.00 51.83 O
ATOM 4 OP2 A B 424 60.567 117.012 18.713 1.00 50.24 O
ATOM 5 O5' A B 424 58.564 116.155 17.517 1.00 50.91 O
ATOM 6 C5' A B 424 57.398 116.228 16.685 1.00 48.22 C
ATOM 7 C4' A B 424 56.608 114.956 16.829 1.00 49.06 C
ATOM 8 O4' A B 424 57.376 113.859 16.279 1.00 47.91 O
ATOM 9 C3' A B 424 56.354 114.554 18.273 1.00 49.98 C
ATOM 10 O3' A B 424 55.196 115.215 18.763 1.00 53.21 O
ATOM 11 C2' A B 424 56.186 113.045 18.178 1.00 48.88 C
ATOM 12 O2' A B 424 54.895 112.685 17.734 1.00 48.30 O
ATOM 13 C1' A B 424 57.187 112.699 17.071 1.00 47.72 C
ATOM 14 N9 A B 424 58.508 112.220 17.481 1.00 46.76 N
ATOM 15 C8 A B 424 59.619 112.967 17.789 1.00 45.78 C
ATOM 16 N7 A B 424 60.695 112.247 18.002 1.00 46.57 N
ATOM 17 C5 A B 424 60.257 110.938 17.851 1.00 45.34 C
ATOM 18 C6 A B 424 60.922 109.694 17.936 1.00 45.99 C
ATOM 19 N6 A B 424 62.225 109.561 18.195 1.00 44.57 N
ATOM 20 N1 A B 424 60.191 108.576 17.739 1.00 45.81 N
ATOM 21 C2 A B 424 58.885 108.707 17.480 1.00 47.32 C
ATOM 22 N3 A B 424 58.149 109.815 17.371 1.00 46.70 N
ATOM 23 C4 A B 424 58.904 110.907 17.564 1.00 45.86 C
ATOM 24 P A B 425 55.075 115.557 20.324 1.00 55.84 P
ATOM 25 OP1 A B 425 53.886 116.435 20.494 1.00 54.58 O
ATOM 26 OP2 A B 425 56.400 116.005 20.830 1.00 56.17 O
ATOM 27 O5' A B 425 54.755 114.142 20.978 1.00 56.76 O
TER
Atoms:
OP1: (48.331,108.882,18.871)
OP2: (49.016,106.443,18.415)
C3': (53.191,109.200,17.375)
C1': (54.510,107.882,18.818)
C5': (51.298,109.455,19.042)
O4': (53.390,108.370,19.539)
C8: (53.139,105.755,18.476)
O2': (55.552,109.760,17.750)
C6: (55.500,103.207,17.967)
C5: (54.683,104.323,18.183)
C4: (55.317,105.536,18.387)
P: (49.286,107.760,19.049)
C4': (52.779,109.462,18.807)
C2': (54.626,108.712,17.536)
C2: (57.309,104.632,18.186)
N1: (56.839,103.395,17.977)
N3: (56.640,105.762,18.399)
N6: (55.028,101.980,17.749)
N7: (53.306,104.474,18.240)
N9: (54.316,106.456,18.574)
O5': (50.732,108.222,18.570)
O3': (53.067,110.387,16.609)
OP2: (49.016,106.443,18.415)
C3': (53.191,109.200,17.375)
C1': (54.510,107.882,18.818)
C5': (51.298,109.455,19.042)
O4': (53.390,108.370,19.539)
C8: (53.139,105.755,18.476)
O2': (55.552,109.760,17.750)
C6: (55.500,103.207,17.967)
C5: (54.683,104.323,18.183)
C4: (55.317,105.536,18.387)
P: (49.286,107.760,19.049)
C4': (52.779,109.462,18.807)
C2': (54.626,108.712,17.536)
C2: (57.309,104.632,18.186)
N1: (56.839,103.395,17.977)
N3: (56.640,105.762,18.399)
N6: (55.028,101.980,17.749)
N7: (53.306,104.474,18.240)
N9: (54.316,106.456,18.574)
O5': (50.732,108.222,18.570)
O3': (53.067,110.387,16.609)
OP1: (58.749,118.629,17.866)
OP2: (60.567,117.012,18.713)
C3': (56.354,114.554,18.273)
C1': (57.187,112.699,17.071)
C5': (57.398,116.228,16.685)
O4': (57.376,113.859,16.279)
C8: (59.619,112.967,17.789)
O2': (54.895,112.685,17.734)
C6: (60.922,109.694,17.936)
C5: (60.257,110.938,17.851)
C4: (58.904,110.907,17.564)
P: (59.552,117.389,17.688)
C4': (56.608,114.956,16.829)
C2': (56.186,113.045,18.178)
C2: (58.885,108.707,17.480)
N1: (60.191,108.576,17.739)
N3: (58.149,109.815,17.371)
N6: (62.225,109.561,18.195)
N7: (60.695,112.247,18.002)
N9: (58.508,112.220,17.481)
O5': (58.564,116.155,17.517)
O3': (55.196,115.215,18.763)
OP2: (60.567,117.012,18.713)
C3': (56.354,114.554,18.273)
C1': (57.187,112.699,17.071)
C5': (57.398,116.228,16.685)
O4': (57.376,113.859,16.279)
C8: (59.619,112.967,17.789)
O2': (54.895,112.685,17.734)
C6: (60.922,109.694,17.936)
C5: (60.257,110.938,17.851)
C4: (58.904,110.907,17.564)
P: (59.552,117.389,17.688)
C4': (56.608,114.956,16.829)
C2': (56.186,113.045,18.178)
C2: (58.885,108.707,17.480)
N1: (60.191,108.576,17.739)
N3: (58.149,109.815,17.371)
N6: (62.225,109.561,18.195)
N7: (60.695,112.247,18.002)
N9: (58.508,112.220,17.481)
O5': (58.564,116.155,17.517)
O3': (55.196,115.215,18.763)
Image (generated by PyMOL):