Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.502 106.807 20.708 1.00 43.21 O
ATOM 2 P A A 222 49.306 106.912 19.117 1.00 44.47 P
ATOM 3 OP1 A A 222 48.293 107.983 18.897 1.00 42.02 O
ATOM 4 OP2 A A 222 49.087 105.555 18.552 1.00 44.34 O
ATOM 5 O5' A A 222 50.723 107.408 18.587 1.00 44.40 O
ATOM 6 C5' A A 222 51.300 108.629 19.089 1.00 44.30 C
ATOM 7 C4' A A 222 52.780 108.657 18.823 1.00 42.58 C
ATOM 8 O4' A A 222 53.447 107.621 19.586 1.00 40.61 O
ATOM 9 C3' A A 222 53.174 108.357 17.395 1.00 43.16 C
ATOM 10 O3' A A 222 53.001 109.492 16.561 1.00 47.26 O
ATOM 11 C2' A A 222 54.624 107.919 17.547 1.00 41.59 C
ATOM 12 O2' A A 222 55.538 108.987 17.730 1.00 43.57 O
ATOM 13 C1' A A 222 54.543 107.111 18.841 1.00 40.54 C
ATOM 14 N9 A A 222 54.306 105.696 18.570 1.00 38.76 N
ATOM 15 C8 A A 222 53.105 105.037 18.431 1.00 37.79 C
ATOM 16 N7 A A 222 53.236 103.759 18.167 1.00 37.65 N
ATOM 17 C5 A A 222 54.612 103.564 18.136 1.00 35.36 C
ATOM 18 C6 A A 222 55.396 102.427 17.907 1.00 34.74 C
ATOM 19 N6 A A 222 54.889 101.220 17.655 1.00 37.94 N
ATOM 20 N1 A A 222 56.738 102.569 17.941 1.00 35.52 N
ATOM 21 C2 A A 222 57.247 103.780 18.196 1.00 35.84 C
ATOM 22 N3 A A 222 56.610 104.927 18.433 1.00 37.00 N
ATOM 23 C4 A A 222 55.280 104.746 18.386 1.00 35.94 C
ATOM 24 P C A 223 53.181 109.333 14.976 1.00 49.00 P
ATOM 25 OP1 C A 223 53.133 110.697 14.386 1.00 51.76 O
ATOM 26 OP2 C A 223 52.261 108.275 14.476 1.00 48.07 O
ATOM 27 O5' C A 223 54.674 108.807 14.874 1.00 46.76 O
TER
ATOM 1 O3' A B 423 60.292 116.623 16.477 1.00 45.38 O
ATOM 2 P A B 424 59.580 116.477 17.902 1.00 44.46 P
ATOM 3 OP1 A B 424 58.774 117.697 18.151 1.00 45.75 O
ATOM 4 OP2 A B 424 60.627 116.073 18.872 1.00 45.44 O
ATOM 5 O5' A B 424 58.595 115.241 17.699 1.00 46.50 O
ATOM 6 C5' A B 424 57.402 115.353 16.899 1.00 44.24 C
ATOM 7 C4' A B 424 56.617 114.066 16.983 1.00 43.01 C
ATOM 8 O4' A B 424 57.412 112.995 16.418 1.00 41.00 O
ATOM 9 C3' A B 424 56.322 113.618 18.407 1.00 42.23 C
ATOM 10 O3' A B 424 55.122 114.241 18.852 1.00 43.11 O
ATOM 11 C2' A B 424 56.198 112.102 18.273 1.00 40.79 C
ATOM 12 O2' A B 424 54.923 111.690 17.819 1.00 39.64 O
ATOM 13 C1' A B 424 57.217 111.808 17.166 1.00 39.98 C
ATOM 14 N9 A B 424 58.532 111.306 17.569 1.00 38.17 N
ATOM 15 C8 A B 424 59.644 112.027 17.945 1.00 37.05 C
ATOM 16 N7 A B 424 60.710 111.287 18.147 1.00 35.56 N
ATOM 17 C5 A B 424 60.266 109.992 17.906 1.00 34.45 C
ATOM 18 C6 A B 424 60.923 108.748 17.926 1.00 34.32 C
ATOM 19 N6 A B 424 62.232 108.603 18.165 1.00 33.03 N
ATOM 20 N1 A B 424 60.184 107.641 17.673 1.00 34.98 N
ATOM 21 C2 A B 424 58.882 107.790 17.392 1.00 35.74 C
ATOM 22 N3 A B 424 58.158 108.910 17.312 1.00 37.15 N
ATOM 23 C4 A B 424 58.920 109.986 17.583 1.00 36.05 C
ATOM 24 P A B 425 54.931 114.597 20.406 1.00 48.67 P
ATOM 25 OP1 A B 425 53.678 115.402 20.507 1.00 47.26 O
ATOM 26 OP2 A B 425 56.210 115.134 20.972 1.00 46.96 O
ATOM 27 O5' A B 425 54.637 113.185 21.080 1.00 47.75 O
TER
ATOM 2 P A A 222 49.306 106.912 19.117 1.00 44.47 P
ATOM 3 OP1 A A 222 48.293 107.983 18.897 1.00 42.02 O
ATOM 4 OP2 A A 222 49.087 105.555 18.552 1.00 44.34 O
ATOM 5 O5' A A 222 50.723 107.408 18.587 1.00 44.40 O
ATOM 6 C5' A A 222 51.300 108.629 19.089 1.00 44.30 C
ATOM 7 C4' A A 222 52.780 108.657 18.823 1.00 42.58 C
ATOM 8 O4' A A 222 53.447 107.621 19.586 1.00 40.61 O
ATOM 9 C3' A A 222 53.174 108.357 17.395 1.00 43.16 C
ATOM 10 O3' A A 222 53.001 109.492 16.561 1.00 47.26 O
ATOM 11 C2' A A 222 54.624 107.919 17.547 1.00 41.59 C
ATOM 12 O2' A A 222 55.538 108.987 17.730 1.00 43.57 O
ATOM 13 C1' A A 222 54.543 107.111 18.841 1.00 40.54 C
ATOM 14 N9 A A 222 54.306 105.696 18.570 1.00 38.76 N
ATOM 15 C8 A A 222 53.105 105.037 18.431 1.00 37.79 C
ATOM 16 N7 A A 222 53.236 103.759 18.167 1.00 37.65 N
ATOM 17 C5 A A 222 54.612 103.564 18.136 1.00 35.36 C
ATOM 18 C6 A A 222 55.396 102.427 17.907 1.00 34.74 C
ATOM 19 N6 A A 222 54.889 101.220 17.655 1.00 37.94 N
ATOM 20 N1 A A 222 56.738 102.569 17.941 1.00 35.52 N
ATOM 21 C2 A A 222 57.247 103.780 18.196 1.00 35.84 C
ATOM 22 N3 A A 222 56.610 104.927 18.433 1.00 37.00 N
ATOM 23 C4 A A 222 55.280 104.746 18.386 1.00 35.94 C
ATOM 24 P C A 223 53.181 109.333 14.976 1.00 49.00 P
ATOM 25 OP1 C A 223 53.133 110.697 14.386 1.00 51.76 O
ATOM 26 OP2 C A 223 52.261 108.275 14.476 1.00 48.07 O
ATOM 27 O5' C A 223 54.674 108.807 14.874 1.00 46.76 O
TER
ATOM 1 O3' A B 423 60.292 116.623 16.477 1.00 45.38 O
ATOM 2 P A B 424 59.580 116.477 17.902 1.00 44.46 P
ATOM 3 OP1 A B 424 58.774 117.697 18.151 1.00 45.75 O
ATOM 4 OP2 A B 424 60.627 116.073 18.872 1.00 45.44 O
ATOM 5 O5' A B 424 58.595 115.241 17.699 1.00 46.50 O
ATOM 6 C5' A B 424 57.402 115.353 16.899 1.00 44.24 C
ATOM 7 C4' A B 424 56.617 114.066 16.983 1.00 43.01 C
ATOM 8 O4' A B 424 57.412 112.995 16.418 1.00 41.00 O
ATOM 9 C3' A B 424 56.322 113.618 18.407 1.00 42.23 C
ATOM 10 O3' A B 424 55.122 114.241 18.852 1.00 43.11 O
ATOM 11 C2' A B 424 56.198 112.102 18.273 1.00 40.79 C
ATOM 12 O2' A B 424 54.923 111.690 17.819 1.00 39.64 O
ATOM 13 C1' A B 424 57.217 111.808 17.166 1.00 39.98 C
ATOM 14 N9 A B 424 58.532 111.306 17.569 1.00 38.17 N
ATOM 15 C8 A B 424 59.644 112.027 17.945 1.00 37.05 C
ATOM 16 N7 A B 424 60.710 111.287 18.147 1.00 35.56 N
ATOM 17 C5 A B 424 60.266 109.992 17.906 1.00 34.45 C
ATOM 18 C6 A B 424 60.923 108.748 17.926 1.00 34.32 C
ATOM 19 N6 A B 424 62.232 108.603 18.165 1.00 33.03 N
ATOM 20 N1 A B 424 60.184 107.641 17.673 1.00 34.98 N
ATOM 21 C2 A B 424 58.882 107.790 17.392 1.00 35.74 C
ATOM 22 N3 A B 424 58.158 108.910 17.312 1.00 37.15 N
ATOM 23 C4 A B 424 58.920 109.986 17.583 1.00 36.05 C
ATOM 24 P A B 425 54.931 114.597 20.406 1.00 48.67 P
ATOM 25 OP1 A B 425 53.678 115.402 20.507 1.00 47.26 O
ATOM 26 OP2 A B 425 56.210 115.134 20.972 1.00 46.96 O
ATOM 27 O5' A B 425 54.637 113.185 21.080 1.00 47.75 O
TER
Atoms:
OP1: (48.293,107.983,18.897)
OP2: (49.087,105.555,18.552)
C3': (53.174,108.357,17.395)
C1': (54.543,107.111,18.841)
C5': (51.300,108.629,19.089)
O4': (53.447,107.621,19.586)
C8: (53.105,105.037,18.431)
O2': (55.538,108.987,17.730)
C6: (55.396,102.427,17.907)
C5: (54.612,103.564,18.136)
C4: (55.280,104.746,18.386)
P: (49.306,106.912,19.117)
C4': (52.780,108.657,18.823)
C2': (54.624,107.919,17.547)
C2: (57.247,103.780,18.196)
N1: (56.738,102.569,17.941)
N3: (56.610,104.927,18.433)
N6: (54.889,101.220,17.655)
N7: (53.236,103.759,18.167)
N9: (54.306,105.696,18.570)
O5': (50.723,107.408,18.587)
O3': (53.001,109.492,16.561)
OP2: (49.087,105.555,18.552)
C3': (53.174,108.357,17.395)
C1': (54.543,107.111,18.841)
C5': (51.300,108.629,19.089)
O4': (53.447,107.621,19.586)
C8: (53.105,105.037,18.431)
O2': (55.538,108.987,17.730)
C6: (55.396,102.427,17.907)
C5: (54.612,103.564,18.136)
C4: (55.280,104.746,18.386)
P: (49.306,106.912,19.117)
C4': (52.780,108.657,18.823)
C2': (54.624,107.919,17.547)
C2: (57.247,103.780,18.196)
N1: (56.738,102.569,17.941)
N3: (56.610,104.927,18.433)
N6: (54.889,101.220,17.655)
N7: (53.236,103.759,18.167)
N9: (54.306,105.696,18.570)
O5': (50.723,107.408,18.587)
O3': (53.001,109.492,16.561)
OP1: (58.774,117.697,18.151)
OP2: (60.627,116.073,18.872)
C3': (56.322,113.618,18.407)
C1': (57.217,111.808,17.166)
C5': (57.402,115.353,16.899)
O4': (57.412,112.995,16.418)
C8: (59.644,112.027,17.945)
O2': (54.923,111.690,17.819)
C6: (60.923,108.748,17.926)
C5: (60.266,109.992,17.906)
C4: (58.920,109.986,17.583)
P: (59.580,116.477,17.902)
C4': (56.617,114.066,16.983)
C2': (56.198,112.102,18.273)
C2: (58.882,107.790,17.392)
N1: (60.184,107.641,17.673)
N3: (58.158,108.910,17.312)
N6: (62.232,108.603,18.165)
N7: (60.710,111.287,18.147)
N9: (58.532,111.306,17.569)
O5': (58.595,115.241,17.699)
O3': (55.122,114.241,18.852)
OP2: (60.627,116.073,18.872)
C3': (56.322,113.618,18.407)
C1': (57.217,111.808,17.166)
C5': (57.402,115.353,16.899)
O4': (57.412,112.995,16.418)
C8: (59.644,112.027,17.945)
O2': (54.923,111.690,17.819)
C6: (60.923,108.748,17.926)
C5: (60.266,109.992,17.906)
C4: (58.920,109.986,17.583)
P: (59.580,116.477,17.902)
C4': (56.617,114.066,16.983)
C2': (56.198,112.102,18.273)
C2: (58.882,107.790,17.392)
N1: (60.184,107.641,17.673)
N3: (58.158,108.910,17.312)
N6: (62.232,108.603,18.165)
N7: (60.710,111.287,18.147)
N9: (58.532,111.306,17.569)
O5': (58.595,115.241,17.699)
O3': (55.122,114.241,18.852)
Image (generated by PyMOL):