Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.631 106.858 20.666 1.00 42.17 O
ATOM 2 P A A 222 49.467 106.956 19.067 1.00 43.64 P
ATOM 3 OP1 A A 222 48.489 108.053 18.821 1.00 43.01 O
ATOM 4 OP2 A A 222 49.208 105.598 18.515 1.00 43.23 O
ATOM 5 O5' A A 222 50.911 107.420 18.567 1.00 42.46 O
ATOM 6 C5' A A 222 51.433 108.708 18.960 1.00 42.21 C
ATOM 7 C4' A A 222 52.914 108.786 18.697 1.00 41.30 C
ATOM 8 O4' A A 222 53.613 107.803 19.505 1.00 40.33 O
ATOM 9 C3' A A 222 53.336 108.460 17.281 1.00 41.07 C
ATOM 10 O3' A A 222 53.148 109.555 16.399 1.00 44.60 O
ATOM 11 C2' A A 222 54.793 108.048 17.461 1.00 40.04 C
ATOM 12 O2' A A 222 55.720 109.115 17.611 1.00 40.28 O
ATOM 13 C1' A A 222 54.701 107.263 18.766 1.00 37.91 C
ATOM 14 N9 A A 222 54.404 105.865 18.489 1.00 35.39 N
ATOM 15 C8 A A 222 53.168 105.271 18.349 1.00 35.41 C
ATOM 16 N7 A A 222 53.231 103.987 18.089 1.00 34.36 N
ATOM 17 C5 A A 222 54.595 103.719 18.059 1.00 32.04 C
ATOM 18 C6 A A 222 55.311 102.545 17.835 1.00 32.22 C
ATOM 19 N6 A A 222 54.729 101.371 17.589 1.00 36.46 N
ATOM 20 N1 A A 222 56.663 102.610 17.869 1.00 32.17 N
ATOM 21 C2 A A 222 57.238 103.794 18.115 1.00 30.95 C
ATOM 22 N3 A A 222 56.666 104.974 18.346 1.00 31.49 N
ATOM 23 C4 A A 222 55.327 104.865 18.303 1.00 33.14 C
ATOM 24 P C A 223 53.362 109.333 14.825 1.00 46.26 P
ATOM 25 OP1 C A 223 53.282 110.667 14.167 1.00 48.33 O
ATOM 26 OP2 C A 223 52.470 108.232 14.376 1.00 46.29 O
ATOM 27 O5' C A 223 54.867 108.824 14.765 1.00 43.95 O
TER
ATOM 1 O3' A B 423 60.505 116.580 16.388 1.00 44.71 O
ATOM 2 P A B 424 59.743 116.466 17.791 1.00 45.06 P
ATOM 3 OP1 A B 424 58.916 117.694 17.966 1.00 45.10 O
ATOM 4 OP2 A B 424 60.766 116.113 18.810 1.00 45.30 O
ATOM 5 O5' A B 424 58.763 115.228 17.577 1.00 46.38 O
ATOM 6 C5' A B 424 57.542 115.358 16.820 1.00 43.56 C
ATOM 7 C4' A B 424 56.740 114.086 16.933 1.00 42.86 C
ATOM 8 O4' A B 424 57.504 113.005 16.349 1.00 40.44 O
ATOM 9 C3' A B 424 56.467 113.640 18.364 1.00 42.29 C
ATOM 10 O3' A B 424 55.275 114.258 18.834 1.00 44.61 O
ATOM 11 C2' A B 424 56.327 112.126 18.233 1.00 41.24 C
ATOM 12 O2' A B 424 55.038 111.734 17.803 1.00 40.42 O
ATOM 13 C1' A B 424 57.327 111.824 17.112 1.00 39.66 C
ATOM 14 N9 A B 424 58.653 111.358 17.512 1.00 38.34 N
ATOM 15 C8 A B 424 59.748 112.121 17.856 1.00 36.78 C
ATOM 16 N7 A B 424 60.837 111.417 18.063 1.00 35.90 N
ATOM 17 C5 A B 424 60.428 110.101 17.864 1.00 34.81 C
ATOM 18 C6 A B 424 61.121 108.875 17.920 1.00 34.59 C
ATOM 19 N6 A B 424 62.433 108.775 18.176 1.00 33.93 N
ATOM 20 N1 A B 424 60.417 107.743 17.693 1.00 34.60 N
ATOM 21 C2 A B 424 59.105 107.847 17.418 1.00 37.20 C
ATOM 22 N3 A B 424 58.344 108.945 17.323 1.00 37.33 N
ATOM 23 C4 A B 424 59.078 110.050 17.556 1.00 36.30 C
ATOM 24 P A B 425 55.137 114.660 20.386 1.00 49.90 P
ATOM 25 OP1 A B 425 53.950 115.556 20.508 1.00 48.30 O
ATOM 26 OP2 A B 425 56.471 115.113 20.899 1.00 48.91 O
ATOM 27 O5' A B 425 54.767 113.290 21.106 1.00 48.78 O
TER
ATOM 2 P A A 222 49.467 106.956 19.067 1.00 43.64 P
ATOM 3 OP1 A A 222 48.489 108.053 18.821 1.00 43.01 O
ATOM 4 OP2 A A 222 49.208 105.598 18.515 1.00 43.23 O
ATOM 5 O5' A A 222 50.911 107.420 18.567 1.00 42.46 O
ATOM 6 C5' A A 222 51.433 108.708 18.960 1.00 42.21 C
ATOM 7 C4' A A 222 52.914 108.786 18.697 1.00 41.30 C
ATOM 8 O4' A A 222 53.613 107.803 19.505 1.00 40.33 O
ATOM 9 C3' A A 222 53.336 108.460 17.281 1.00 41.07 C
ATOM 10 O3' A A 222 53.148 109.555 16.399 1.00 44.60 O
ATOM 11 C2' A A 222 54.793 108.048 17.461 1.00 40.04 C
ATOM 12 O2' A A 222 55.720 109.115 17.611 1.00 40.28 O
ATOM 13 C1' A A 222 54.701 107.263 18.766 1.00 37.91 C
ATOM 14 N9 A A 222 54.404 105.865 18.489 1.00 35.39 N
ATOM 15 C8 A A 222 53.168 105.271 18.349 1.00 35.41 C
ATOM 16 N7 A A 222 53.231 103.987 18.089 1.00 34.36 N
ATOM 17 C5 A A 222 54.595 103.719 18.059 1.00 32.04 C
ATOM 18 C6 A A 222 55.311 102.545 17.835 1.00 32.22 C
ATOM 19 N6 A A 222 54.729 101.371 17.589 1.00 36.46 N
ATOM 20 N1 A A 222 56.663 102.610 17.869 1.00 32.17 N
ATOM 21 C2 A A 222 57.238 103.794 18.115 1.00 30.95 C
ATOM 22 N3 A A 222 56.666 104.974 18.346 1.00 31.49 N
ATOM 23 C4 A A 222 55.327 104.865 18.303 1.00 33.14 C
ATOM 24 P C A 223 53.362 109.333 14.825 1.00 46.26 P
ATOM 25 OP1 C A 223 53.282 110.667 14.167 1.00 48.33 O
ATOM 26 OP2 C A 223 52.470 108.232 14.376 1.00 46.29 O
ATOM 27 O5' C A 223 54.867 108.824 14.765 1.00 43.95 O
TER
ATOM 1 O3' A B 423 60.505 116.580 16.388 1.00 44.71 O
ATOM 2 P A B 424 59.743 116.466 17.791 1.00 45.06 P
ATOM 3 OP1 A B 424 58.916 117.694 17.966 1.00 45.10 O
ATOM 4 OP2 A B 424 60.766 116.113 18.810 1.00 45.30 O
ATOM 5 O5' A B 424 58.763 115.228 17.577 1.00 46.38 O
ATOM 6 C5' A B 424 57.542 115.358 16.820 1.00 43.56 C
ATOM 7 C4' A B 424 56.740 114.086 16.933 1.00 42.86 C
ATOM 8 O4' A B 424 57.504 113.005 16.349 1.00 40.44 O
ATOM 9 C3' A B 424 56.467 113.640 18.364 1.00 42.29 C
ATOM 10 O3' A B 424 55.275 114.258 18.834 1.00 44.61 O
ATOM 11 C2' A B 424 56.327 112.126 18.233 1.00 41.24 C
ATOM 12 O2' A B 424 55.038 111.734 17.803 1.00 40.42 O
ATOM 13 C1' A B 424 57.327 111.824 17.112 1.00 39.66 C
ATOM 14 N9 A B 424 58.653 111.358 17.512 1.00 38.34 N
ATOM 15 C8 A B 424 59.748 112.121 17.856 1.00 36.78 C
ATOM 16 N7 A B 424 60.837 111.417 18.063 1.00 35.90 N
ATOM 17 C5 A B 424 60.428 110.101 17.864 1.00 34.81 C
ATOM 18 C6 A B 424 61.121 108.875 17.920 1.00 34.59 C
ATOM 19 N6 A B 424 62.433 108.775 18.176 1.00 33.93 N
ATOM 20 N1 A B 424 60.417 107.743 17.693 1.00 34.60 N
ATOM 21 C2 A B 424 59.105 107.847 17.418 1.00 37.20 C
ATOM 22 N3 A B 424 58.344 108.945 17.323 1.00 37.33 N
ATOM 23 C4 A B 424 59.078 110.050 17.556 1.00 36.30 C
ATOM 24 P A B 425 55.137 114.660 20.386 1.00 49.90 P
ATOM 25 OP1 A B 425 53.950 115.556 20.508 1.00 48.30 O
ATOM 26 OP2 A B 425 56.471 115.113 20.899 1.00 48.91 O
ATOM 27 O5' A B 425 54.767 113.290 21.106 1.00 48.78 O
TER
Atoms:
OP1: (48.489,108.053,18.821)
OP2: (49.208,105.598,18.515)
C3': (53.336,108.460,17.281)
C1': (54.701,107.263,18.766)
C5': (51.433,108.708,18.960)
O4': (53.613,107.803,19.505)
C8: (53.168,105.271,18.349)
O2': (55.720,109.115,17.611)
C6: (55.311,102.545,17.835)
C5: (54.595,103.719,18.059)
C4: (55.327,104.865,18.303)
P: (49.467,106.956,19.067)
C4': (52.914,108.786,18.697)
C2': (54.793,108.048,17.461)
C2: (57.238,103.794,18.115)
N1: (56.663,102.610,17.869)
N3: (56.666,104.974,18.346)
N6: (54.729,101.371,17.589)
N7: (53.231,103.987,18.089)
N9: (54.404,105.865,18.489)
O5': (50.911,107.420,18.567)
O3': (53.148,109.555,16.399)
OP2: (49.208,105.598,18.515)
C3': (53.336,108.460,17.281)
C1': (54.701,107.263,18.766)
C5': (51.433,108.708,18.960)
O4': (53.613,107.803,19.505)
C8: (53.168,105.271,18.349)
O2': (55.720,109.115,17.611)
C6: (55.311,102.545,17.835)
C5: (54.595,103.719,18.059)
C4: (55.327,104.865,18.303)
P: (49.467,106.956,19.067)
C4': (52.914,108.786,18.697)
C2': (54.793,108.048,17.461)
C2: (57.238,103.794,18.115)
N1: (56.663,102.610,17.869)
N3: (56.666,104.974,18.346)
N6: (54.729,101.371,17.589)
N7: (53.231,103.987,18.089)
N9: (54.404,105.865,18.489)
O5': (50.911,107.420,18.567)
O3': (53.148,109.555,16.399)
OP1: (58.916,117.694,17.966)
OP2: (60.766,116.113,18.810)
C3': (56.467,113.640,18.364)
C1': (57.327,111.824,17.112)
C5': (57.542,115.358,16.820)
O4': (57.504,113.005,16.349)
C8: (59.748,112.121,17.856)
O2': (55.038,111.734,17.803)
C6: (61.121,108.875,17.920)
C5: (60.428,110.101,17.864)
C4: (59.078,110.050,17.556)
P: (59.743,116.466,17.791)
C4': (56.740,114.086,16.933)
C2': (56.327,112.126,18.233)
C2: (59.105,107.847,17.418)
N1: (60.417,107.743,17.693)
N3: (58.344,108.945,17.323)
N6: (62.433,108.775,18.176)
N7: (60.837,111.417,18.063)
N9: (58.653,111.358,17.512)
O5': (58.763,115.228,17.577)
O3': (55.275,114.258,18.834)
OP2: (60.766,116.113,18.810)
C3': (56.467,113.640,18.364)
C1': (57.327,111.824,17.112)
C5': (57.542,115.358,16.820)
O4': (57.504,113.005,16.349)
C8: (59.748,112.121,17.856)
O2': (55.038,111.734,17.803)
C6: (61.121,108.875,17.920)
C5: (60.428,110.101,17.864)
C4: (59.078,110.050,17.556)
P: (59.743,116.466,17.791)
C4': (56.740,114.086,16.933)
C2': (56.327,112.126,18.233)
C2: (59.105,107.847,17.418)
N1: (60.417,107.743,17.693)
N3: (58.344,108.945,17.323)
N6: (62.433,108.775,18.176)
N7: (60.837,111.417,18.063)
N9: (58.653,111.358,17.512)
O5': (58.763,115.228,17.577)
O3': (55.275,114.258,18.834)
Image (generated by PyMOL):