Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0222:0424
Extra
PDB:
ATOM 1 O3' U A 221 49.679 106.887 20.806 1.00 43.06 O
ATOM 2 P A A 222 49.436 106.985 19.222 1.00 44.30 P
ATOM 3 OP1 A A 222 48.424 108.057 19.020 1.00 43.85 O
ATOM 4 OP2 A A 222 49.202 105.636 18.654 1.00 44.00 O
ATOM 5 O5' A A 222 50.840 107.484 18.669 1.00 44.82 O
ATOM 6 C5' A A 222 51.434 108.689 19.180 1.00 44.31 C
ATOM 7 C4' A A 222 52.912 108.691 18.915 1.00 43.63 C
ATOM 8 O4' A A 222 53.560 107.640 19.679 1.00 41.88 O
ATOM 9 C3' A A 222 53.309 108.389 17.486 1.00 43.92 C
ATOM 10 O3' A A 222 53.132 109.524 16.652 1.00 48.44 O
ATOM 11 C2' A A 222 54.759 107.944 17.650 1.00 43.65 C
ATOM 12 O2' A A 222 55.683 108.998 17.853 1.00 43.84 O
ATOM 13 C1' A A 222 54.667 107.132 18.942 1.00 42.95 C
ATOM 14 N9 A A 222 54.434 105.720 18.656 1.00 41.19 N
ATOM 15 C8 A A 222 53.231 105.067 18.511 1.00 41.91 C
ATOM 16 N7 A A 222 53.357 103.794 18.237 1.00 42.45 N
ATOM 17 C5 A A 222 54.730 103.592 18.203 1.00 39.31 C
ATOM 18 C6 A A 222 55.506 102.454 17.967 1.00 39.25 C
ATOM 19 N6 A A 222 54.988 101.251 17.715 1.00 41.33 N
ATOM 20 N1 A A 222 56.852 102.588 18.000 1.00 40.04 N
ATOM 21 C2 A A 222 57.365 103.793 18.259 1.00 40.02 C
ATOM 22 N3 A A 222 56.736 104.940 18.502 1.00 41.20 N
ATOM 23 C4 A A 222 55.404 104.768 18.459 1.00 40.16 C
ATOM 24 P C A 223 53.328 109.381 15.061 1.00 51.10 P
ATOM 25 OP1 C A 223 53.252 110.756 14.500 1.00 53.63 O
ATOM 26 OP2 C A 223 52.438 108.316 14.527 1.00 49.84 O
ATOM 27 O5' C A 223 54.834 108.891 14.950 1.00 49.83 O
TER
ATOM 1 O3' A B 423 60.455 116.641 16.551 1.00 47.86 O
ATOM 2 P A B 424 59.678 116.540 17.944 1.00 48.27 P
ATOM 3 OP1 A B 424 58.866 117.774 18.082 1.00 49.57 O
ATOM 4 OP2 A B 424 60.668 116.191 18.986 1.00 49.39 O
ATOM 5 O5' A B 424 58.699 115.300 17.751 1.00 49.84 O
ATOM 6 C5' A B 424 57.494 115.406 16.969 1.00 48.44 C
ATOM 7 C4' A B 424 56.716 114.116 17.058 1.00 47.19 C
ATOM 8 O4' A B 424 57.509 113.052 16.478 1.00 44.17 O
ATOM 9 C3' A B 424 56.436 113.656 18.481 1.00 46.57 C
ATOM 10 O3' A B 424 55.247 114.274 18.958 1.00 48.60 O
ATOM 11 C2' A B 424 56.306 112.143 18.334 1.00 45.12 C
ATOM 12 O2' A B 424 55.020 111.742 17.901 1.00 41.67 O
ATOM 13 C1' A B 424 57.317 111.857 17.216 1.00 43.81 C
ATOM 14 N9 A B 424 58.635 111.356 17.615 1.00 42.31 N
ATOM 15 C8 A B 424 59.740 112.085 17.976 1.00 40.93 C
ATOM 16 N7 A B 424 60.808 111.357 18.188 1.00 40.94 N
ATOM 17 C5 A B 424 60.375 110.056 17.971 1.00 40.96 C
ATOM 18 C6 A B 424 61.038 108.814 18.020 1.00 41.12 C
ATOM 19 N6 A B 424 62.336 108.676 18.286 1.00 40.33 N
ATOM 20 N1 A B 424 60.311 107.704 17.773 1.00 41.83 N
ATOM 21 C2 A B 424 59.009 107.841 17.486 1.00 42.55 C
ATOM 22 N3 A B 424 58.277 108.951 17.395 1.00 43.80 N
ATOM 23 C4 A B 424 59.029 110.038 17.648 1.00 42.66 C
ATOM 24 P A B 425 55.092 114.613 20.521 1.00 53.03 P
ATOM 25 OP1 A B 425 53.878 115.458 20.663 1.00 51.72 O
ATOM 26 OP2 A B 425 56.402 115.091 21.062 1.00 52.14 O
ATOM 27 O5' A B 425 54.766 113.205 21.188 1.00 53.10 O
TER
ATOM 2 P A A 222 49.436 106.985 19.222 1.00 44.30 P
ATOM 3 OP1 A A 222 48.424 108.057 19.020 1.00 43.85 O
ATOM 4 OP2 A A 222 49.202 105.636 18.654 1.00 44.00 O
ATOM 5 O5' A A 222 50.840 107.484 18.669 1.00 44.82 O
ATOM 6 C5' A A 222 51.434 108.689 19.180 1.00 44.31 C
ATOM 7 C4' A A 222 52.912 108.691 18.915 1.00 43.63 C
ATOM 8 O4' A A 222 53.560 107.640 19.679 1.00 41.88 O
ATOM 9 C3' A A 222 53.309 108.389 17.486 1.00 43.92 C
ATOM 10 O3' A A 222 53.132 109.524 16.652 1.00 48.44 O
ATOM 11 C2' A A 222 54.759 107.944 17.650 1.00 43.65 C
ATOM 12 O2' A A 222 55.683 108.998 17.853 1.00 43.84 O
ATOM 13 C1' A A 222 54.667 107.132 18.942 1.00 42.95 C
ATOM 14 N9 A A 222 54.434 105.720 18.656 1.00 41.19 N
ATOM 15 C8 A A 222 53.231 105.067 18.511 1.00 41.91 C
ATOM 16 N7 A A 222 53.357 103.794 18.237 1.00 42.45 N
ATOM 17 C5 A A 222 54.730 103.592 18.203 1.00 39.31 C
ATOM 18 C6 A A 222 55.506 102.454 17.967 1.00 39.25 C
ATOM 19 N6 A A 222 54.988 101.251 17.715 1.00 41.33 N
ATOM 20 N1 A A 222 56.852 102.588 18.000 1.00 40.04 N
ATOM 21 C2 A A 222 57.365 103.793 18.259 1.00 40.02 C
ATOM 22 N3 A A 222 56.736 104.940 18.502 1.00 41.20 N
ATOM 23 C4 A A 222 55.404 104.768 18.459 1.00 40.16 C
ATOM 24 P C A 223 53.328 109.381 15.061 1.00 51.10 P
ATOM 25 OP1 C A 223 53.252 110.756 14.500 1.00 53.63 O
ATOM 26 OP2 C A 223 52.438 108.316 14.527 1.00 49.84 O
ATOM 27 O5' C A 223 54.834 108.891 14.950 1.00 49.83 O
TER
ATOM 1 O3' A B 423 60.455 116.641 16.551 1.00 47.86 O
ATOM 2 P A B 424 59.678 116.540 17.944 1.00 48.27 P
ATOM 3 OP1 A B 424 58.866 117.774 18.082 1.00 49.57 O
ATOM 4 OP2 A B 424 60.668 116.191 18.986 1.00 49.39 O
ATOM 5 O5' A B 424 58.699 115.300 17.751 1.00 49.84 O
ATOM 6 C5' A B 424 57.494 115.406 16.969 1.00 48.44 C
ATOM 7 C4' A B 424 56.716 114.116 17.058 1.00 47.19 C
ATOM 8 O4' A B 424 57.509 113.052 16.478 1.00 44.17 O
ATOM 9 C3' A B 424 56.436 113.656 18.481 1.00 46.57 C
ATOM 10 O3' A B 424 55.247 114.274 18.958 1.00 48.60 O
ATOM 11 C2' A B 424 56.306 112.143 18.334 1.00 45.12 C
ATOM 12 O2' A B 424 55.020 111.742 17.901 1.00 41.67 O
ATOM 13 C1' A B 424 57.317 111.857 17.216 1.00 43.81 C
ATOM 14 N9 A B 424 58.635 111.356 17.615 1.00 42.31 N
ATOM 15 C8 A B 424 59.740 112.085 17.976 1.00 40.93 C
ATOM 16 N7 A B 424 60.808 111.357 18.188 1.00 40.94 N
ATOM 17 C5 A B 424 60.375 110.056 17.971 1.00 40.96 C
ATOM 18 C6 A B 424 61.038 108.814 18.020 1.00 41.12 C
ATOM 19 N6 A B 424 62.336 108.676 18.286 1.00 40.33 N
ATOM 20 N1 A B 424 60.311 107.704 17.773 1.00 41.83 N
ATOM 21 C2 A B 424 59.009 107.841 17.486 1.00 42.55 C
ATOM 22 N3 A B 424 58.277 108.951 17.395 1.00 43.80 N
ATOM 23 C4 A B 424 59.029 110.038 17.648 1.00 42.66 C
ATOM 24 P A B 425 55.092 114.613 20.521 1.00 53.03 P
ATOM 25 OP1 A B 425 53.878 115.458 20.663 1.00 51.72 O
ATOM 26 OP2 A B 425 56.402 115.091 21.062 1.00 52.14 O
ATOM 27 O5' A B 425 54.766 113.205 21.188 1.00 53.10 O
TER
Atoms:
OP1: (48.424,108.057,19.020)
OP2: (49.202,105.636,18.654)
C3': (53.309,108.389,17.486)
C1': (54.667,107.132,18.942)
C5': (51.434,108.689,19.180)
O4': (53.560,107.640,19.679)
C8: (53.231,105.067,18.511)
O2': (55.683,108.998,17.853)
C6: (55.506,102.454,17.967)
C5: (54.730,103.592,18.203)
C4: (55.404,104.768,18.459)
P: (49.436,106.985,19.222)
C4': (52.912,108.691,18.915)
C2': (54.759,107.944,17.650)
C2: (57.365,103.793,18.259)
N1: (56.852,102.588,18.000)
N3: (56.736,104.940,18.502)
N6: (54.988,101.251,17.715)
N7: (53.357,103.794,18.237)
N9: (54.434,105.720,18.656)
O5': (50.840,107.484,18.669)
O3': (53.132,109.524,16.652)
OP2: (49.202,105.636,18.654)
C3': (53.309,108.389,17.486)
C1': (54.667,107.132,18.942)
C5': (51.434,108.689,19.180)
O4': (53.560,107.640,19.679)
C8: (53.231,105.067,18.511)
O2': (55.683,108.998,17.853)
C6: (55.506,102.454,17.967)
C5: (54.730,103.592,18.203)
C4: (55.404,104.768,18.459)
P: (49.436,106.985,19.222)
C4': (52.912,108.691,18.915)
C2': (54.759,107.944,17.650)
C2: (57.365,103.793,18.259)
N1: (56.852,102.588,18.000)
N3: (56.736,104.940,18.502)
N6: (54.988,101.251,17.715)
N7: (53.357,103.794,18.237)
N9: (54.434,105.720,18.656)
O5': (50.840,107.484,18.669)
O3': (53.132,109.524,16.652)
OP1: (58.866,117.774,18.082)
OP2: (60.668,116.191,18.986)
C3': (56.436,113.656,18.481)
C1': (57.317,111.857,17.216)
C5': (57.494,115.406,16.969)
O4': (57.509,113.052,16.478)
C8: (59.740,112.085,17.976)
O2': (55.020,111.742,17.901)
C6: (61.038,108.814,18.020)
C5: (60.375,110.056,17.971)
C4: (59.029,110.038,17.648)
P: (59.678,116.540,17.944)
C4': (56.716,114.116,17.058)
C2': (56.306,112.143,18.334)
C2: (59.009,107.841,17.486)
N1: (60.311,107.704,17.773)
N3: (58.277,108.951,17.395)
N6: (62.336,108.676,18.286)
N7: (60.808,111.357,18.188)
N9: (58.635,111.356,17.615)
O5': (58.699,115.300,17.751)
O3': (55.247,114.274,18.958)
OP2: (60.668,116.191,18.986)
C3': (56.436,113.656,18.481)
C1': (57.317,111.857,17.216)
C5': (57.494,115.406,16.969)
O4': (57.509,113.052,16.478)
C8: (59.740,112.085,17.976)
O2': (55.020,111.742,17.901)
C6: (61.038,108.814,18.020)
C5: (60.375,110.056,17.971)
C4: (59.029,110.038,17.648)
P: (59.678,116.540,17.944)
C4': (56.716,114.116,17.058)
C2': (56.306,112.143,18.334)
C2: (59.009,107.841,17.486)
N1: (60.311,107.704,17.773)
N3: (58.277,108.951,17.395)
N6: (62.336,108.676,18.286)
N7: (60.808,111.357,18.188)
N9: (58.635,111.356,17.615)
O5': (58.699,115.300,17.751)
O3': (55.247,114.274,18.958)
Image (generated by PyMOL):